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Title | CRYSTAL STRUCTURE OF METHIONYL-TRNA SYNTHETASE METRS FROM BR MELITENSIS IN COMPLEX WITH INHIBITOR CHEM 1312 | |
Keywords | SSGCID, METRS, METHIONYL-TRNA SYNTHETASE, PROTEIN BIOSYNTHES STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, LIGASE, LIGASE-LIGASE INHIBITOR COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5K0S | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | METHIONINE--TRNA LIGASE | A | 496 | 3826 | 0 |
2 | Protein | METHIONINE--TRNA LIGASE | B | 485 | 3790 | 0 |
3 | Protein | METHIONINE--TRNA LIGASE | C | 497 | 3828 | 0 |
4 | Ligand | METHIONINE--TRNA LIGASE | A | 1 | 0 | 25 |
5 | Ligand | METHIONINE--TRNA LIGASE | B | 1 | 0 | 25 |
6 | Ligand | METHIONINE--TRNA LIGASE | C | 1 | 0 | 25 |
7 | Water | 219 | 0 | 219 | ||
total | 1700 | 11444 | 294 |
Unit 1 | ARG3 GLU4 LYS5 TYR6 TYR7 ILE8 THR9 THR10 ALA11 ILE12 ALA13 TYR14 PRO15 ASN16 GLY17 LYS18 PRO19 HIS20 ILE21 GLY22 HIS23 ALA24 TYR25 GLU26 LEU27 ILE28 ALA29 THR30 ASP31 ALA32 MET33 ALA34 ARG35 PHE36 GLN37 ARG38 LEU39 ASN40 GLY41 MET42 ASP43 VAL44 TYR45 PHE46 LEU47 THR48 GLY49 THR50 ASP51 GLU52 HIS53 GLY54 ILE55 LYS56 MET57 LEU58 GLN59 SER60 ALA61 ARG62 LYS63 GLU64 GLY65 ILE66 THR67 PRO68 ARG69 ASP70 LEU71 ALA72 ASP73 ARG74 ASN75 THR76 SER77 ALA78 PHE79 ARG80 ARG81 MET82 ALA83 GLU84 VAL85 LEU86 ASN87 SER88 SER89 ASN90 ASP91 ASP92 TYR93 ILE94 ARG95 THR96 SER97 GLU98 GLU99 ARG100 HIS101 TYR102 LYS103 ALA104 SER105 GLN106 ALA107 ILE108 TRP109 GLN110 ALA111 MET112 VAL113 ALA114 ASN115 GLY116 ASP117 ILE118 TYR119 LYS120 GLY121 GLY122 TYR123 ALA124 GLY125 TRP126 TYR127 SER128 VAL129 ARG130 ASP131 GLU132 ALA133 TYR134 TYR135 GLY136 GLU137 GLU138 GLU139 THR140 GLU141 VAL142 ARG143 ALA144 ASP145 GLY146 VAL147 ARG148 TYR149 GLY150 PRO151 GLN152 GLY153 THR154 PRO155 VAL156 GLU157 TRP158 VAL159 GLU160 GLU161 GLU162 SER163 TYR164 PHE165 PHE166 ARG167 LEU168 SER169 ALA170 TYR171 GLN172 ASP173 LYS174 LEU175 LEU176 ASP177 LEU178 TYR179 GLU180 ASN181 ASN182 PRO183 GLY184 PHE185 ILE186 MET187 PRO188 ALA189 GLU190 ARG191 ARG192 ASN193 GLU194 ILE195 VAL196 SER197 PHE198 VAL199 LYS200 SER201 GLY202 LEU203 LYS204 ASP205 LEU206 SER207 ILE208 SER209 ARG210 THR211 THR212 PHE213 ASP214 TRP215 GLY216 ILE217 PRO218 VAL219 PRO220 GLY221 ASP222 GLU223 LYS224 HIS225 VAL226 MET227 TYR228 VAL229 TRP230 VAL231 ASP232 ALA233 LEU234 THR235 ASN236 TYR237 ILE238 THR239 ALA240 LEU241 GLY242 TYR243 PRO244 ASP245 THR246 THR247 ASP248 GLU249 ARG250 TRP251 ALA252 TYR253 TRP254 PRO255 ALA256 ASN257 ALA258 HIS259 ILE260 ILE261 GLY262 LYS263 ASP264 ILE265 SER266 ARG267 PHE268 HIS269 ALA270 VAL271 TYR272 TRP273 PRO274 ALA275 PHE276 LEU277 MET278 SER279 ALA280 GLN281 LEU282 PRO283 LEU284 PRO285 LYS286 ARG287 VAL288 PHE289 ALA290 HIS291 GLY292 PHE293 LEU294 PHE295 ASN296 ARG297 ILE309 ASP310 PRO311 PHE312 GLU313 LEU314 VAL315 GLU316 ARG317 TYR318 GLY319 LEU320 ASP321 GLN322 LEU323 ARG324 TYR325 PHE326 LEU327 MET328 ARG329 GLU330 VAL331 PRO332 PHE333 GLY334 GLN335 ASP336 GLY337 SER338 TYR339 SER340 HIS341 GLU342 ALA343 ILE344 VAL345 ASN346 ARG347 THR348 ASN349 ALA350 ASP351 LEU352 ALA353 ASN354 ASP355 LEU356 GLY357 ASN358 LEU359 ALA360 GLN361 ARG362 SER363 LEU364 SER365 MET366 ILE367 ALA368 LYS369 ASN370 CYS371 GLU372 GLY373 LYS374 VAL375 PRO376 GLN377 PRO378 GLY379 ALA380 PHE381 SER382 GLU383 ALA384 ASP385 LYS386 ALA387 ILE388 LEU389 ASP390 GLN391 ALA392 ASP393 ALA394 ALA395 LEU396 GLU397 THR398 ALA399 ARG400 LYS401 ALA402 MET403 ASP404 ASP405 GLN406 ALA407 LEU408 HIS409 LEU410 ALA411 LEU412 GLY413 ALA414 ILE415 PHE416 ALA417 VAL418 VAL419 ALA420 GLU421 ALA422 ASN423 ARG424 TYR425 PHE426 ALA427 GLY428 GLN429 GLU430 PRO431 TRP432 ALA433 LEU434 ARG435 LYS436 THR437 ASP438 PRO439 ALA440 ARG441 MET442 GLY443 THR444 VAL445 LEU446 TYR447 VAL448 THR449 ALA450 GLU451 VAL452 LEU453 ARG454 ARG455 VAL456 GLY457 ILE458 MET459 VAL460 GLN461 PRO462 PHE463 ILE464 PRO465 GLN466 SER467 ALA468 GLU469 LYS470 LEU471 LEU472 ASP473 ILE474 LEU475 ALA476 VAL477 PRO478 ALA479 ASP480 LYS481 ARG482 GLN483 PHE484 ALA485 ASP486 VAL487 LEU488 ALA489 SER490 PRO491 LEU492 ALA493 GLY494 GLY495 THR496 ASP497 LEU498 PRO499 ALA500 PRO501 GLN502 PRO503 VAL504 PHE505 PRO506 ARG507 TYR508 VAL509 |
Unit 2 | ARG3 GLU4 LYS5 TYR6 TYR7 ILE8 THR9 THR10 ALA11 ILE12 ALA13 TYR14 PRO15 ASN16 GLY17 LYS18 PRO19 HIS20 ILE21 GLY22 HIS23 ALA24 TYR25 GLU26 LEU27 ILE28 ALA29 THR30 ASP31 ALA32 MET33 ALA34 ARG35 PHE36 GLN37 ARG38 LEU39 ASN40 GLY41 MET42 ASP43 VAL44 TYR45 PHE46 LEU47 THR48 GLY49 THR50 ASP51 GLU52 HIS53 GLY54 ILE55 LYS56 MET57 LEU58 GLN59 SER60 ALA61 ARG62 LYS63 GLU64 GLY65 ILE66 THR67 PRO68 ARG69 ASP70 LEU71 ALA72 ASP73 ARG74 ASN75 THR76 SER77 ALA78 PHE79 ARG80 ARG81 MET82 ALA83 GLU84 VAL85 LEU86 ASN87 SER88 SER89 ASN90 ASP91 ASP92 TYR93 ILE94 ARG95 THR96 SER97 GLU98 GLU99 ARG100 HIS101 TYR102 LYS103 ALA104 SER105 GLN106 ALA107 ILE108 TRP109 GLN110 ALA111 MET112 VAL113 ALA114 ASN115 GLY116 ASP117 ILE118 TYR119 LYS120 GLY121 GLY122 TYR123 ALA124 GLY125 TRP126 TYR127 SER128 VAL129 ARG130 ASP131 GLU132 ALA133 TYR134 TYR135 GLY136 GLU137 GLU138 GLU139 ARG148 TYR149 GLY150 PRO151 THR154 PRO155 VAL156 GLU157 TRP158 VAL159 GLU160 GLU161 GLU162 SER163 TYR164 PHE165 PHE166 ARG167 LEU168 SER169 ALA170 TYR171 GLN172 ASP173 LYS174 LEU175 LEU176 ASP177 LEU178 TYR179 GLU180 ASN181 ASN182 PRO183 GLY184 PHE185 ILE186 MET187 PRO188 ALA189 GLU190 ARG191 ARG192 ASN193 GLU194 ILE195 VAL196 SER197 PHE198 VAL199 LYS200 SER201 GLY202 LEU203 LYS204 ASP205 LEU206 SER207 ILE208 SER209 ARG210 THR211 THR212 PHE213 ASP214 TRP215 GLY216 ILE217 PRO218 VAL219 PRO220 GLY221 ASP222 GLU223 LYS224 HIS225 VAL226 MET227 TYR228 VAL229 TRP230 VAL231 ASP232 ALA233 LEU234 THR235 ASN236 TYR237 ILE238 THR239 ALA240 LEU241 GLY242 TYR243 PRO244 ASP245 THR246 THR247 ASP248 GLU249 ARG250 TRP251 ALA252 TYR253 TRP254 PRO255 ALA256 ASN257 ALA258 HIS259 ILE260 ILE261 GLY262 LYS263 ASP264 ILE265 SER266 ARG267 PHE268 HIS269 ALA270 VAL271 TYR272 TRP273 PRO274 ALA275 PHE276 LEU277 MET278 SER279 ALA280 GLN281 LEU282 PRO283 LEU284 PRO285 LYS286 ARG287 VAL288 PHE289 ALA290 HIS291 GLY292 PHE293 LEU294 PHE295 ILE309 ASP310 PRO311 PHE312 GLU313 LEU314 VAL315 GLU316 ARG317 TYR318 GLY319 LEU320 ASP321 GLN322 LEU323 ARG324 TYR325 PHE326 LEU327 MET328 ARG329 GLU330 VAL331 PRO332 PHE333 GLY334 GLN335 ASP336 GLY337 SER338 TYR339 SER340 HIS341 GLU342 ALA343 ILE344 VAL345 ASN346 ARG347 THR348 ASN349 ALA350 ASP351 LEU352 ALA353 ASN354 ASP355 LEU356 GLY357 ASN358 LEU359 ALA360 GLN361 ARG362 SER363 LEU364 SER365 MET366 ILE367 ALA368 LYS369 ASN370 CYS371 GLU372 GLY373 LYS374 VAL375 PRO376 GLN377 PRO378 GLY379 ALA380 PHE381 SER382 GLU383 ALA384 ASP385 LYS386 ALA387 ILE388 LEU389 ASP390 GLN391 ALA392 ASP393 ALA394 ALA395 LEU396 GLU397 THR398 ALA399 ARG400 LYS401 ALA402 MET403 ASP404 ASP405 GLN406 ALA407 LEU408 HIS409 LEU410 ALA411 LEU412 GLY413 ALA414 ILE415 PHE416 ALA417 VAL418 VAL419 ALA420 GLU421 ALA422 ASN423 ARG424 TYR425 PHE426 ALA427 GLY428 GLN429 GLU430 PRO431 TRP432 ALA433 LEU434 ARG435 LYS436 THR437 ASP438 PRO439 ALA440 ARG441 MET442 GLY443 THR444 VAL445 LEU446 TYR447 VAL448 THR449 ALA450 GLU451 VAL452 LEU453 ARG454 ARG455 VAL456 GLY457 ILE458 MET459 VAL460 GLN461 PRO462 PHE463 ILE464 PRO465 GLN466 SER467 ALA468 GLU469 LYS470 LEU471 LEU472 ASP473 ILE474 LEU475 ALA476 VAL477 PRO478 ALA479 ASP480 LYS481 ARG482 GLN483 PHE484 ALA485 ASP486 VAL487 LEU488 ALA489 SER490 PRO491 LEU492 ALA493 GLY494 GLY495 THR496 ASP497 LEU498 PRO499 ALA500 PRO501 GLN502 PRO503 VAL504 PHE505 PRO506 ARG507 TYR508 VAL509 GLU510 |
Unit 3 | ARG3 GLU4 LYS5 TYR6 TYR7 ILE8 THR9 THR10 ALA11 ILE12 ALA13 TYR14 PRO15 ASN16 GLY17 LYS18 PRO19 HIS20 ILE21 GLY22 HIS23 ALA24 TYR25 GLU26 LEU27 ILE28 ALA29 THR30 ASP31 ALA32 MET33 ALA34 ARG35 PHE36 GLN37 ARG38 LEU39 ASN40 GLY41 MET42 ASP43 VAL44 TYR45 PHE46 LEU47 THR48 GLY49 THR50 ASP51 GLU52 HIS53 GLY54 ILE55 LYS56 MET57 LEU58 GLN59 SER60 ALA61 ARG62 LYS63 GLU64 GLY65 ILE66 THR67 PRO68 ARG69 ASP70 LEU71 ALA72 ASP73 ARG74 ASN75 THR76 SER77 ALA78 PHE79 ARG80 ARG81 MET82 ALA83 GLU84 VAL85 LEU86 ASN87 SER88 SER89 ASN90 ASP91 ASP92 TYR93 ILE94 ARG95 THR96 SER97 GLU98 GLU99 ARG100 HIS101 TYR102 LYS103 ALA104 SER105 GLN106 ALA107 ILE108 TRP109 GLN110 ALA111 MET112 VAL113 ALA114 ASN115 GLY116 ASP117 ILE118 TYR119 LYS120 GLY121 GLY122 TYR123 ALA124 GLY125 TRP126 TYR127 SER128 VAL129 ARG130 ASP131 GLU132 ALA133 TYR134 TYR135 GLY136 GLU137 GLU138 GLU139 THR140 GLU141 VAL142 ARG143 ALA144 ASP145 GLY146 VAL147 ARG148 TYR149 GLY150 PRO151 GLN152 GLY153 THR154 PRO155 VAL156 GLU157 TRP158 VAL159 GLU160 GLU161 GLU162 SER163 TYR164 PHE165 PHE166 ARG167 LEU168 SER169 ALA170 TYR171 GLN172 ASP173 LYS174 LEU175 LEU176 ASP177 LEU178 TYR179 GLU180 ASN181 ASN182 PRO183 GLY184 PHE185 ILE186 MET187 PRO188 ALA189 GLU190 ARG191 ARG192 ASN193 GLU194 ILE195 VAL196 SER197 PHE198 VAL199 LYS200 SER201 GLY202 LEU203 LYS204 ASP205 LEU206 SER207 ILE208 SER209 ARG210 THR211 THR212 PHE213 ASP214 TRP215 GLY216 ILE217 PRO218 VAL219 PRO220 GLY221 ASP222 GLU223 LYS224 HIS225 VAL226 MET227 TYR228 VAL229 TRP230 VAL231 ASP232 ALA233 LEU234 THR235 ASN236 TYR237 ILE238 THR239 ALA240 LEU241 GLY242 TYR243 PRO244 ASP245 THR246 THR247 ASP248 GLU249 ARG250 TRP251 ALA252 TYR253 TRP254 PRO255 ALA256 ASN257 ALA258 HIS259 ILE260 ILE261 GLY262 LYS263 ASP264 ILE265 SER266 ARG267 PHE268 HIS269 ALA270 VAL271 TYR272 TRP273 PRO274 ALA275 PHE276 LEU277 MET278 SER279 ALA280 GLN281 LEU282 PRO283 LEU284 PRO285 LYS286 ARG287 VAL288 PHE289 ALA290 HIS291 GLY292 PHE293 LEU294 PHE295 ASN296 ARG297 ILE309 ASP310 PRO311 PHE312 GLU313 LEU314 VAL315 GLU316 ARG317 TYR318 GLY319 LEU320 ASP321 GLN322 LEU323 ARG324 TYR325 PHE326 LEU327 MET328 ARG329 GLU330 VAL331 PRO332 PHE333 GLY334 GLN335 ASP336 GLY337 SER338 TYR339 SER340 HIS341 GLU342 ALA343 ILE344 VAL345 ASN346 ARG347 THR348 ASN349 ALA350 ASP351 LEU352 ALA353 ASN354 ASP355 LEU356 GLY357 ASN358 LEU359 ALA360 GLN361 ARG362 SER363 LEU364 SER365 MET366 ILE367 ALA368 LYS369 ASN370 CYS371 GLU372 GLY373 LYS374 VAL375 PRO376 GLN377 PRO378 GLY379 ALA380 PHE381 SER382 GLU383 ALA384 ASP385 LYS386 ALA387 ILE388 LEU389 ASP390 GLN391 ALA392 ASP393 ALA394 ALA395 LEU396 GLU397 THR398 ALA399 ARG400 LYS401 ALA402 MET403 ASP404 ASP405 GLN406 ALA407 LEU408 HIS409 LEU410 ALA411 LEU412 GLY413 ALA414 ILE415 PHE416 ALA417 VAL418 VAL419 ALA420 GLU421 ALA422 ASN423 ARG424 TYR425 PHE426 ALA427 GLY428 GLN429 GLU430 PRO431 TRP432 ALA433 LEU434 ARG435 LYS436 THR437 ASP438 PRO439 ALA440 ARG441 MET442 GLY443 THR444 VAL445 LEU446 TYR447 VAL448 THR449 ALA450 GLU451 VAL452 LEU453 ARG454 ARG455 VAL456 GLY457 ILE458 MET459 VAL460 GLN461 PRO462 PHE463 ILE464 PRO465 GLN466 SER467 ALA468 GLU469 LYS470 LEU471 LEU472 ASP473 ILE474 LEU475 ALA476 VAL477 PRO478 ALA479 ASP480 LYS481 ARG482 GLN483 PHE484 ALA485 ASP486 VAL487 LEU488 ALA489 SER490 PRO491 LEU492 ALA493 GLY494 GLY495 THR496 ASP497 LEU498 PRO499 ALA500 PRO501 GLN502 PRO503 VAL504 PHE505 PRO506 ARG507 TYR508 VAL509 GLU510 |
Unit 4 | 0OU601 |
Unit 5 | 0OU601 |
Unit 6 | 0OU601 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |