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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF WILD TYPE AMIDASE FROM VIBRIO CHOLERAE 0395 AT TEMPARATURE AT 1.8 ANGSTROMS RESOLUTION.
Keywords HEAT SHOCK PROTEIN, LYASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5JZM     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INTRACELLULAR PROTEASE/AMIDASE  A 281 2163 0
2  Protein   INTRACELLULAR PROTEASE/AMIDASE  B 281 2163 0
3  Protein   INTRACELLULAR PROTEASE/AMIDASE  C 281 2163 0
4  Protein   INTRACELLULAR PROTEASE/AMIDASE  D 281 2163 0
5  Protein   INTRACELLULAR PROTEASE/AMIDASE  E 281 2163 0
6  Protein   INTRACELLULAR PROTEASE/AMIDASE  F 281 2163 0
7 Water     1691 0 1691
total       3377 12978 1691

Proteins
Unit 1 MET5 ASN6 ASP7 LYS8 HIS9 PRO10 THR11 PRO12 ASP13 PRO14 ALA15 GLU16 ASP17 ASN18 ALA19 PHE20 PHE21 PRO22 SER23 ALA24 TYR25 SER26 LEU27 SER28 GLN29 PHE30 THR31 ALA32 SER33 LYS34 SER35 ASP36 LEU37 SER38 GLY39 ALA40 HIS41 TYR42 PRO43 THR44 PRO45 TYR46 GLN47 GLY48 GLY49 ARG50 TRP51 LYS52 ILE53 LEU54 VAL55 VAL56 GLY57 ALA58 ASP59 GLU60 ARG61 TYR62 LEU63 MET64 MET65 ASP66 ASN67 GLY68 THR69 PHE70 PHE71 SER72 THR73 GLY74 ASN75 HIS76 PRO77 VAL78 GLU79 THR80 LEU81 LEU82 PRO83 MET84 TYR85 HIS86 LEU87 ASP88 LYS89 ALA90 GLY91 PHE92 SER93 PHE94 ASP95 ILE96 ALA97 THR98 LEU99 SER100 GLY101 ASN102 PRO103 VAL104 LYS105 PHE106 GLU107 TRP108 TRP109 ALA110 MET111 PRO112 ARG113 GLU114 ASP115 GLN116 GLU117 VAL118 ASN119 GLY120 LEU121 TYR122 SER123 LYS124 TYR125 GLN126 SER127 SER128 PHE129 ARG130 GLN131 PRO132 LEU133 LYS134 LEU135 SER136 ASP137 VAL138 ILE139 GLU140 THR141 ALA142 LEU143 GLY144 GLU145 ASP146 SER147 ASP148 TYR149 ILE150 GLY151 VAL152 PHE153 ILE154 PRO155 GLY156 GLY157 HIS158 GLY159 ALA160 LEU161 MET162 GLY163 LEU164 PRO165 ASP166 SER167 GLN168 GLU169 VAL170 LYS171 ALA172 VAL173 LEU174 GLN175 TRP176 ALA177 MET178 LYS179 GLN180 ASN181 LYS182 PHE183 ILE184 ILE185 SER186 LEU187 CYS188 HIS189 GLY190 PRO191 ALA192 ALA193 PHE194 LEU195 ALA196 VAL197 GLY198 ASP199 ASP200 PRO201 LEU202 PHE203 ALA204 GLY205 TYR206 LYS207 ILE208 VAL209 ALA210 PHE211 PRO212 ASP213 GLU214 MET215 ASP216 ALA217 GLN218 THR219 PRO220 SER221 ILE222 GLY223 TYR224 MET225 PRO226 GLY227 HIS228 LEU229 THR230 TRP231 LYS232 PHE233 GLY234 GLU235 GLN236 LEU237 GLN238 ALA239 ILE240 GLY241 PHE242 GLU243 LEU244 LEU245 ASN246 THR247 GLY248 ILE249 SER250 GLY251 GLN252 VAL253 PHE254 GLN255 ASP256 ARG257 LYS258 MET259 LEU260 THR261 GLY262 ASP263 SER264 PRO265 LEU266 ALA267 GLY268 ASN269 ALA270 LEU271 GLY272 GLN273 LEU274 ALA275 ALA276 LYS277 ALA278 LEU279 LEU280 ALA281 GLU282 VAL283 GLU284 GLN285
Unit 2 MET5 ASN6 ASP7 LYS8 HIS9 PRO10 THR11 PRO12 ASP13 PRO14 ALA15 GLU16 ASP17 ASN18 ALA19 PHE20 PHE21 PRO22 SER23 ALA24 TYR25 SER26 LEU27 SER28 GLN29 PHE30 THR31 ALA32 SER33 LYS34 SER35 ASP36 LEU37 SER38 GLY39 ALA40 HIS41 TYR42 PRO43 THR44 PRO45 TYR46 GLN47 GLY48 GLY49 ARG50 TRP51 LYS52 ILE53 LEU54 VAL55 VAL56 GLY57 ALA58 ASP59 GLU60 ARG61 TYR62 LEU63 MET64 MET65 ASP66 ASN67 GLY68 THR69 PHE70 PHE71 SER72 THR73 GLY74 ASN75 HIS76 PRO77 VAL78 GLU79 THR80 LEU81 LEU82 PRO83 MET84 TYR85 HIS86 LEU87 ASP88 LYS89 ALA90 GLY91 PHE92 SER93 PHE94 ASP95 ILE96 ALA97 THR98 LEU99 SER100 GLY101 ASN102 PRO103 VAL104 LYS105 PHE106 GLU107 TRP108 TRP109 ALA110 MET111 PRO112 ARG113 GLU114 ASP115 GLN116 GLU117 VAL118 ASN119 GLY120 LEU121 TYR122 SER123 LYS124 TYR125 GLN126 SER127 SER128 PHE129 ARG130 GLN131 PRO132 LEU133 LYS134 LEU135 SER136 ASP137 VAL138 ILE139 GLU140 THR141 ALA142 LEU143 GLY144 GLU145 ASP146 SER147 ASP148 TYR149 ILE150 GLY151 VAL152 PHE153 ILE154 PRO155 GLY156 GLY157 HIS158 GLY159 ALA160 LEU161 MET162 GLY163 LEU164 PRO165 ASP166 SER167 GLN168 GLU169 VAL170 LYS171 ALA172 VAL173 LEU174 GLN175 TRP176 ALA177 MET178 LYS179 GLN180 ASN181 LYS182 PHE183 ILE184 ILE185 SER186 LEU187 CYS188 HIS189 GLY190 PRO191 ALA192 ALA193 PHE194 LEU195 ALA196 VAL197 GLY198 ASP199 ASP200 PRO201 LEU202 PHE203 ALA204 GLY205 TYR206 LYS207 ILE208 VAL209 ALA210 PHE211 PRO212 ASP213 GLU214 MET215 ASP216 ALA217 GLN218 THR219 PRO220 SER221 ILE222 GLY223 TYR224 MET225 PRO226 GLY227 HIS228 LEU229 THR230 TRP231 LYS232 PHE233 GLY234 GLU235 GLN236 LEU237 GLN238 ALA239 ILE240 GLY241 PHE242 GLU243 LEU244 LEU245 ASN246 THR247 GLY248 ILE249 SER250 GLY251 GLN252 VAL253 PHE254 GLN255 ASP256 ARG257 LYS258 MET259 LEU260 THR261 GLY262 ASP263 SER264 PRO265 LEU266 ALA267 GLY268 ASN269 ALA270 LEU271 GLY272 GLN273 LEU274 ALA275 ALA276 LYS277 ALA278 LEU279 LEU280 ALA281 GLU282 VAL283 GLU284 GLN285
Unit 3 MET5 ASN6 ASP7 LYS8 HIS9 PRO10 THR11 PRO12 ASP13 PRO14 ALA15 GLU16 ASP17 ASN18 ALA19 PHE20 PHE21 PRO22 SER23 ALA24 TYR25 SER26 LEU27 SER28 GLN29 PHE30 THR31 ALA32 SER33 LYS34 SER35 ASP36 LEU37 SER38 GLY39 ALA40 HIS41 TYR42 PRO43 THR44 PRO45 TYR46 GLN47 GLY48 GLY49 ARG50 TRP51 LYS52 ILE53 LEU54 VAL55 VAL56 GLY57 ALA58 ASP59 GLU60 ARG61 TYR62 LEU63 MET64 MET65 ASP66 ASN67 GLY68 THR69 PHE70 PHE71 SER72 THR73 GLY74 ASN75 HIS76 PRO77 VAL78 GLU79 THR80 LEU81 LEU82 PRO83 MET84 TYR85 HIS86 LEU87 ASP88 LYS89 ALA90 GLY91 PHE92 SER93 PHE94 ASP95 ILE96 ALA97 THR98 LEU99 SER100 GLY101 ASN102 PRO103 VAL104 LYS105 PHE106 GLU107 TRP108 TRP109 ALA110 MET111 PRO112 ARG113 GLU114 ASP115 GLN116 GLU117 VAL118 ASN119 GLY120 LEU121 TYR122 SER123 LYS124 TYR125 GLN126 SER127 SER128 PHE129 ARG130 GLN131 PRO132 LEU133 LYS134 LEU135 SER136 ASP137 VAL138 ILE139 GLU140 THR141 ALA142 LEU143 GLY144 GLU145 ASP146 SER147 ASP148 TYR149 ILE150 GLY151 VAL152 PHE153 ILE154 PRO155 GLY156 GLY157 HIS158 GLY159 ALA160 LEU161 MET162 GLY163 LEU164 PRO165 ASP166 SER167 GLN168 GLU169 VAL170 LYS171 ALA172 VAL173 LEU174 GLN175 TRP176 ALA177 MET178 LYS179 GLN180 ASN181 LYS182 PHE183 ILE184 ILE185 SER186 LEU187 CYS188 HIS189 GLY190 PRO191 ALA192 ALA193 PHE194 LEU195 ALA196 VAL197 GLY198 ASP199 ASP200 PRO201 LEU202 PHE203 ALA204 GLY205 TYR206 LYS207 ILE208 VAL209 ALA210 PHE211 PRO212 ASP213 GLU214 MET215 ASP216 ALA217 GLN218 THR219 PRO220 SER221 ILE222 GLY223 TYR224 MET225 PRO226 GLY227 HIS228 LEU229 THR230 TRP231 LYS232 PHE233 GLY234 GLU235 GLN236 LEU237 GLN238 ALA239 ILE240 GLY241 PHE242 GLU243 LEU244 LEU245 ASN246 THR247 GLY248 ILE249 SER250 GLY251 GLN252 VAL253 PHE254 GLN255 ASP256 ARG257 LYS258 MET259 LEU260 THR261 GLY262 ASP263 SER264 PRO265 LEU266 ALA267 GLY268 ASN269 ALA270 LEU271 GLY272 GLN273 LEU274 ALA275 ALA276 LYS277 ALA278 LEU279 LEU280 ALA281 GLU282 VAL283 GLU284 GLN285
Unit 4 MET5 ASN6 ASP7 LYS8 HIS9 PRO10 THR11 PRO12 ASP13 PRO14 ALA15 GLU16 ASP17 ASN18 ALA19 PHE20 PHE21 PRO22 SER23 ALA24 TYR25 SER26 LEU27 SER28 GLN29 PHE30 THR31 ALA32 SER33 LYS34 SER35 ASP36 LEU37 SER38 GLY39 ALA40 HIS41 TYR42 PRO43 THR44 PRO45 TYR46 GLN47 GLY48 GLY49 ARG50 TRP51 LYS52 ILE53 LEU54 VAL55 VAL56 GLY57 ALA58 ASP59 GLU60 ARG61 TYR62 LEU63 MET64 MET65 ASP66 ASN67 GLY68 THR69 PHE70 PHE71 SER72 THR73 GLY74 ASN75 HIS76 PRO77 VAL78 GLU79 THR80 LEU81 LEU82 PRO83 MET84 TYR85 HIS86 LEU87 ASP88 LYS89 ALA90 GLY91 PHE92 SER93 PHE94 ASP95 ILE96 ALA97 THR98 LEU99 SER100 GLY101 ASN102 PRO103 VAL104 LYS105 PHE106 GLU107 TRP108 TRP109 ALA110 MET111 PRO112 ARG113 GLU114 ASP115 GLN116 GLU117 VAL118 ASN119 GLY120 LEU121 TYR122 SER123 LYS124 TYR125 GLN126 SER127 SER128 PHE129 ARG130 GLN131 PRO132 LEU133 LYS134 LEU135 SER136 ASP137 VAL138 ILE139 GLU140 THR141 ALA142 LEU143 GLY144 GLU145 ASP146 SER147 ASP148 TYR149 ILE150 GLY151 VAL152 PHE153 ILE154 PRO155 GLY156 GLY157 HIS158 GLY159 ALA160 LEU161 MET162 GLY163 LEU164 PRO165 ASP166 SER167 GLN168 GLU169 VAL170 LYS171 ALA172 VAL173 LEU174 GLN175 TRP176 ALA177 MET178 LYS179 GLN180 ASN181 LYS182 PHE183 ILE184 ILE185 SER186 LEU187 CYS188 HIS189 GLY190 PRO191 ALA192 ALA193 PHE194 LEU195 ALA196 VAL197 GLY198 ASP199 ASP200 PRO201 LEU202 PHE203 ALA204 GLY205 TYR206 LYS207 ILE208 VAL209 ALA210 PHE211 PRO212 ASP213 GLU214 MET215 ASP216 ALA217 GLN218 THR219 PRO220 SER221 ILE222 GLY223 TYR224 MET225 PRO226 GLY227 HIS228 LEU229 THR230 TRP231 LYS232 PHE233 GLY234 GLU235 GLN236 LEU237 GLN238 ALA239 ILE240 GLY241 PHE242 GLU243 LEU244 LEU245 ASN246 THR247 GLY248 ILE249 SER250 GLY251 GLN252 VAL253 PHE254 GLN255 ASP256 ARG257 LYS258 MET259 LEU260 THR261 GLY262 ASP263 SER264 PRO265 LEU266 ALA267 GLY268 ASN269 ALA270 LEU271 GLY272 GLN273 LEU274 ALA275 ALA276 LYS277 ALA278 LEU279 LEU280 ALA281 GLU282 VAL283 GLU284 GLN285
Unit 5 MET5 ASN6 ASP7 LYS8 HIS9 PRO10 THR11 PRO12 ASP13 PRO14 ALA15 GLU16 ASP17 ASN18 ALA19 PHE20 PHE21 PRO22 SER23 ALA24 TYR25 SER26 LEU27 SER28 GLN29 PHE30 THR31 ALA32 SER33 LYS34 SER35 ASP36 LEU37 SER38 GLY39 ALA40 HIS41 TYR42 PRO43 THR44 PRO45 TYR46 GLN47 GLY48 GLY49 ARG50 TRP51 LYS52 ILE53 LEU54 VAL55 VAL56 GLY57 ALA58 ASP59 GLU60 ARG61 TYR62 LEU63 MET64 MET65 ASP66 ASN67 GLY68 THR69 PHE70 PHE71 SER72 THR73 GLY74 ASN75 HIS76 PRO77 VAL78 GLU79 THR80 LEU81 LEU82 PRO83 MET84 TYR85 HIS86 LEU87 ASP88 LYS89 ALA90 GLY91 PHE92 SER93 PHE94 ASP95 ILE96 ALA97 THR98 LEU99 SER100 GLY101 ASN102 PRO103 VAL104 LYS105 PHE106 GLU107 TRP108 TRP109 ALA110 MET111 PRO112 ARG113 GLU114 ASP115 GLN116 GLU117 VAL118 ASN119 GLY120 LEU121 TYR122 SER123 LYS124 TYR125 GLN126 SER127 SER128 PHE129 ARG130 GLN131 PRO132 LEU133 LYS134 LEU135 SER136 ASP137 VAL138 ILE139 GLU140 THR141 ALA142 LEU143 GLY144 GLU145 ASP146 SER147 ASP148 TYR149 ILE150 GLY151 VAL152 PHE153 ILE154 PRO155 GLY156 GLY157 HIS158 GLY159 ALA160 LEU161 MET162 GLY163 LEU164 PRO165 ASP166 SER167 GLN168 GLU169 VAL170 LYS171 ALA172 VAL173 LEU174 GLN175 TRP176 ALA177 MET178 LYS179 GLN180 ASN181 LYS182 PHE183 ILE184 ILE185 SER186 LEU187 CYS188 HIS189 GLY190 PRO191 ALA192 ALA193 PHE194 LEU195 ALA196 VAL197 GLY198 ASP199 ASP200 PRO201 LEU202 PHE203 ALA204 GLY205 TYR206 LYS207 ILE208 VAL209 ALA210 PHE211 PRO212 ASP213 GLU214 MET215 ASP216 ALA217 GLN218 THR219 PRO220 SER221 ILE222 GLY223 TYR224 MET225 PRO226 GLY227 HIS228 LEU229 THR230 TRP231 LYS232 PHE233 GLY234 GLU235 GLN236 LEU237 GLN238 ALA239 ILE240 GLY241 PHE242 GLU243 LEU244 LEU245 ASN246 THR247 GLY248 ILE249 SER250 GLY251 GLN252 VAL253 PHE254 GLN255 ASP256 ARG257 LYS258 MET259 LEU260 THR261 GLY262 ASP263 SER264 PRO265 LEU266 ALA267 GLY268 ASN269 ALA270 LEU271 GLY272 GLN273 LEU274 ALA275 ALA276 LYS277 ALA278 LEU279 LEU280 ALA281 GLU282 VAL283 GLU284 GLN285
Unit 6 MET5 ASN6 ASP7 LYS8 HIS9 PRO10 THR11 PRO12 ASP13 PRO14 ALA15 GLU16 ASP17 ASN18 ALA19 PHE20 PHE21 PRO22 SER23 ALA24 TYR25 SER26 LEU27 SER28 GLN29 PHE30 THR31 ALA32 SER33 LYS34 SER35 ASP36 LEU37 SER38 GLY39 ALA40 HIS41 TYR42 PRO43 THR44 PRO45 TYR46 GLN47 GLY48 GLY49 ARG50 TRP51 LYS52 ILE53 LEU54 VAL55 VAL56 GLY57 ALA58 ASP59 GLU60 ARG61 TYR62 LEU63 MET64 MET65 ASP66 ASN67 GLY68 THR69 PHE70 PHE71 SER72 THR73 GLY74 ASN75 HIS76 PRO77 VAL78 GLU79 THR80 LEU81 LEU82 PRO83 MET84 TYR85 HIS86 LEU87 ASP88 LYS89 ALA90 GLY91 PHE92 SER93 PHE94 ASP95 ILE96 ALA97 THR98 LEU99 SER100 GLY101 ASN102 PRO103 VAL104 LYS105 PHE106 GLU107 TRP108 TRP109 ALA110 MET111 PRO112 ARG113 GLU114 ASP115 GLN116 GLU117 VAL118 ASN119 GLY120 LEU121 TYR122 SER123 LYS124 TYR125 GLN126 SER127 SER128 PHE129 ARG130 GLN131 PRO132 LEU133 LYS134 LEU135 SER136 ASP137 VAL138 ILE139 GLU140 THR141 ALA142 LEU143 GLY144 GLU145 ASP146 SER147 ASP148 TYR149 ILE150 GLY151 VAL152 PHE153 ILE154 PRO155 GLY156 GLY157 HIS158 GLY159 ALA160 LEU161 MET162 GLY163 LEU164 PRO165 ASP166 SER167 GLN168 GLU169 VAL170 LYS171 ALA172 VAL173 LEU174 GLN175 TRP176 ALA177 MET178 LYS179 GLN180 ASN181 LYS182 PHE183 ILE184 ILE185 SER186 LEU187 CYS188 HIS189 GLY190 PRO191 ALA192 ALA193 PHE194 LEU195 ALA196 VAL197 GLY198 ASP199 ASP200 PRO201 LEU202 PHE203 ALA204 GLY205 TYR206 LYS207 ILE208 VAL209 ALA210 PHE211 PRO212 ASP213 GLU214 MET215 ASP216 ALA217 GLN218 THR219 PRO220 SER221 ILE222 GLY223 TYR224 MET225 PRO226 GLY227 HIS228 LEU229 THR230 TRP231 LYS232 PHE233 GLY234 GLU235 GLN236 LEU237 GLN238 ALA239 ILE240 GLY241 PHE242 GLU243 LEU244 LEU245 ASN246 THR247 GLY248 ILE249 SER250 GLY251 GLN252 VAL253 PHE254 GLN255 ASP256 ARG257 LYS258 MET259 LEU260 THR261 GLY262 ASP263 SER264 PRO265 LEU266 ALA267 GLY268 ASN269 ALA270 LEU271 GLY272 GLN273 LEU274 ALA275 ALA276 LYS277 ALA278 LEU279 LEU280 ALA281 GLU282 VAL283 GLU284 GLN285

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany