5JZ7 - Sequence, Chains, Asymmetric and Biological Units

• Title: NGF IN COMPLEX WITH MEDI578 SCFV
• Keywords: ANTIBODY, COMPLEX, EPITOPE, NGF, SIGNALING PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5JZ7	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BETA-NERVE GROWTH FACTOR	A	110	868	0
2	Protein	BETA-NERVE GROWTH FACTOR	B	110	868	0
3	Protein	MEDI578 SCFV, HEAVY CHAIN	C	128	964	0
4	Protein	MEDI578 SCFV, LIGHT CHAIN	D	110	807	0
5	Protein	BETA-NERVE GROWTH FACTOR	E	110	868	0
6	Protein	BETA-NERVE GROWTH FACTOR	F	110	868	0
7	Protein	MEDI578 SCFV, HEAVY CHAIN	G	128	964	0
8	Protein	MEDI578 SCFV, HEAVY CHAIN	H	128	964	0
9	Protein	MEDI578 SCFV, LIGHT CHAIN	I	110	807	0
10	Protein	MEDI578 SCFV, HEAVY CHAIN	J	128	964	0
11	Protein	MEDI578 SCFV, LIGHT CHAIN	K	110	807	0
12	Protein	MEDI578 SCFV, LIGHT CHAIN	L	110	807	0
total				1392	10556	0

Proteins

Unit 1	PHE 7 HIS 8 ARG 9 GLY 10 GLU 11 PHE 12 SER 13 VAL 14 CYS 15 ASP 16 SER 17 VAL 18 SER 19 VAL 20 TRP 21 VAL 22 GLY 23 ASP 24 LYS 25 THR 26 THR 27 ALA 28 THR 29 ASP 30 ILE 31 LYS 32 GLY 33 LYS 34 GLU 35 VAL 36 MET 37 VAL 38 LEU 39 GLY 40 GLU 41 VAL 42 ASN 43 ILE 44 ASN 45 ASN 46 SER 47 VAL 48 PHE 49 LYS 50 GLN 51 TYR 52 PHE 53 PHE 54 GLU 55 THR 56 LYS 57 CYS 58 ARG 59 ASP 60 PRO 61 ASN 62 PRO 63 VAL 64 ASP 65 SER 66 GLY 67 CYS 68 ARG 69 GLY 70 ILE 71 ASP 72 SER 73 LYS 74 HIS 75 TRP 76 ASN 77 SER 78 TYR 79 CYS 80 THR 81 THR 82 THR 83 HIS 84 THR 85 PHE 86 VAL 87 LYS 88 ALA 89 LEU 90 THR 91 MET 92 ASP 93 GLY 94 LYS 95 GLN 96 ALA 97 ALA 98 TRP 99 ARG 100 PHE 101 ILE 102 ARG 103 ILE 104 ASP 105 THR 106 ALA 107 CYS 108 VAL 109 CYS 110 VAL 111 LEU 112 SER 113 ARG 114 LYS 115 ALA 116
Unit 2	PHE 7 HIS 8 ARG 9 GLY 10 GLU 11 PHE 12 SER 13 VAL 14 CYS 15 ASP 16 SER 17 VAL 18 SER 19 VAL 20 TRP 21 VAL 22 GLY 23 ASP 24 LYS 25 THR 26 THR 27 ALA 28 THR 29 ASP 30 ILE 31 LYS 32 GLY 33 LYS 34 GLU 35 VAL 36 MET 37 VAL 38 LEU 39 GLY 40 GLU 41 VAL 42 ASN 43 ILE 44 ASN 45 ASN 46 SER 47 VAL 48 PHE 49 LYS 50 GLN 51 TYR 52 PHE 53 PHE 54 GLU 55 THR 56 LYS 57 CYS 58 ARG 59 ASP 60 PRO 61 ASN 62 PRO 63 VAL 64 ASP 65 SER 66 GLY 67 CYS 68 ARG 69 GLY 70 ILE 71 ASP 72 SER 73 LYS 74 HIS 75 TRP 76 ASN 77 SER 78 TYR 79 CYS 80 THR 81 THR 82 THR 83 HIS 84 THR 85 PHE 86 VAL 87 LYS 88 ALA 89 LEU 90 THR 91 MET 92 ASP 93 GLY 94 LYS 95 GLN 96 ALA 97 ALA 98 TRP 99 ARG 100 PHE 101 ILE 102 ARG 103 ILE 104 ASP 105 THR 106 ALA 107 CYS 108 VAL 109 CYS 110 VAL 111 LEU 112 SER 113 ARG 114 LYS 115 ALA 116
Unit 3	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 GLY 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 GLY 33 ILE 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 ILE 51 ILE 52 PRO 52A ILE 53 PHE 54 ASP 55 THR 56 GLY 57 ASN 58 SER 59 ALA 60 GLN 61 SER 62 PHE 63 GLN 64 GLY 65 ARG 66 VAL 67 THR 68 ILE 69 THR 70 ALA 71 ASP 72 GLU 73 SER 74 THR 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A SER 82B LEU 82C ARG 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 SER 95 SER 96 ARG 97 ILE 98 TYR 99 ASP 100 LEU 100A ASN 100B PRO 100C SER 100D LEU 100E THR 100F ALA 100G TYR 100H TYR 100I ASP 100J MET 100K ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 MET 108 VAL 109 THR 110 VAL 111 SER 112 SER 113
Unit 4	GLN 1 SER 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 11 SER 12 ALA 13 ALA 14 PRO 15 GLY 16 GLN 17 LYS 18 VAL 19 THR 20 ILE 21 SER 22 CYS 23 SER 24 GLY 25 SER 26 SER 27 SER 27A ASN 27B ILE 28 GLY 29 ASN 30 ASN 31 TYR 32 VAL 33 SER 34 TRP 35 TYR 36 GLN 37 GLN 38 LEU 39 PRO 40 GLY 41 THR 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ASN 51 ASN 52 LYS 53 ARG 54 PRO 55 SER 56 GLY 57 ILE 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 LYS 66 SER 67 GLY 68 THR 69 SER 70 ALA 71 THR 72 LEU 73 GLY 74 ILE 75 THR 76 GLY 77 LEU 78 GLN 79 THR 80 GLY 81 ASP 82 GLU 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 GLY 89 THR 90 TRP 91 ASP 92 SER 93 SER 94 LEU 95 SER 95A ALA 95B TRP 96 VAL 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 THR 105 VAL 106 LEU 107
Unit 5	PHE 7 HIS 8 ARG 9 GLY 10 GLU 11 PHE 12 SER 13 VAL 14 CYS 15 ASP 16 SER 17 VAL 18 SER 19 VAL 20 TRP 21 VAL 22 GLY 23 ASP 24 LYS 25 THR 26 THR 27 ALA 28 THR 29 ASP 30 ILE 31 LYS 32 GLY 33 LYS 34 GLU 35 VAL 36 MET 37 VAL 38 LEU 39 GLY 40 GLU 41 VAL 42 ASN 43 ILE 44 ASN 45 ASN 46 SER 47 VAL 48 PHE 49 LYS 50 GLN 51 TYR 52 PHE 53 PHE 54 GLU 55 THR 56 LYS 57 CYS 58 ARG 59 ASP 60 PRO 61 ASN 62 PRO 63 VAL 64 ASP 65 SER 66 GLY 67 CYS 68 ARG 69 GLY 70 ILE 71 ASP 72 SER 73 LYS 74 HIS 75 TRP 76 ASN 77 SER 78 TYR 79 CYS 80 THR 81 THR 82 THR 83 HIS 84 THR 85 PHE 86 VAL 87 LYS 88 ALA 89 LEU 90 THR 91 MET 92 ASP 93 GLY 94 LYS 95 GLN 96 ALA 97 ALA 98 TRP 99 ARG 100 PHE 101 ILE 102 ARG 103 ILE 104 ASP 105 THR 106 ALA 107 CYS 108 VAL 109 CYS 110 VAL 111 LEU 112 SER 113 ARG 114 LYS 115 ALA 116
Unit 6	PHE 7 HIS 8 ARG 9 GLY 10 GLU 11 PHE 12 SER 13 VAL 14 CYS 15 ASP 16 SER 17 VAL 18 SER 19 VAL 20 TRP 21 VAL 22 GLY 23 ASP 24 LYS 25 THR 26 THR 27 ALA 28 THR 29 ASP 30 ILE 31 LYS 32 GLY 33 LYS 34 GLU 35 VAL 36 MET 37 VAL 38 LEU 39 GLY 40 GLU 41 VAL 42 ASN 43 ILE 44 ASN 45 ASN 46 SER 47 VAL 48 PHE 49 LYS 50 GLN 51 TYR 52 PHE 53 PHE 54 GLU 55 THR 56 LYS 57 CYS 58 ARG 59 ASP 60 PRO 61 ASN 62 PRO 63 VAL 64 ASP 65 SER 66 GLY 67 CYS 68 ARG 69 GLY 70 ILE 71 ASP 72 SER 73 LYS 74 HIS 75 TRP 76 ASN 77 SER 78 TYR 79 CYS 80 THR 81 THR 82 THR 83 HIS 84 THR 85 PHE 86 VAL 87 LYS 88 ALA 89 LEU 90 THR 91 MET 92 ASP 93 GLY 94 LYS 95 GLN 96 ALA 97 ALA 98 TRP 99 ARG 100 PHE 101 ILE 102 ARG 103 ILE 104 ASP 105 THR 106 ALA 107 CYS 108 VAL 109 CYS 110 VAL 111 LEU 112 SER 113 ARG 114 LYS 115 ALA 116
Unit 7	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 GLY 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 GLY 33 ILE 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 ILE 51 ILE 52 PRO 52A ILE 53 PHE 54 ASP 55 THR 56 GLY 57 ASN 58 SER 59 ALA 60 GLN 61 SER 62 PHE 63 GLN 64 GLY 65 ARG 66 VAL 67 THR 68 ILE 69 THR 70 ALA 71 ASP 72 GLU 73 SER 74 THR 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A SER 82B LEU 82C ARG 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 SER 95 SER 96 ARG 97 ILE 98 TYR 99 ASP 100 LEU 100A ASN 100B PRO 100C SER 100D LEU 100E THR 100F ALA 100G TYR 100H TYR 100I ASP 100J MET 100K ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 MET 108 VAL 109 THR 110 VAL 111 SER 112 SER 113
Unit 8	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 GLY 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 GLY 33 ILE 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 ILE 51 ILE 52 PRO 52A ILE 53 PHE 54 ASP 55 THR 56 GLY 57 ASN 58 SER 59 ALA 60 GLN 61 SER 62 PHE 63 GLN 64 GLY 65 ARG 66 VAL 67 THR 68 ILE 69 THR 70 ALA 71 ASP 72 GLU 73 SER 74 THR 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A SER 82B LEU 82C ARG 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 SER 95 SER 96 ARG 97 ILE 98 TYR 99 ASP 100 LEU 100A ASN 100B PRO 100C SER 100D LEU 100E THR 100F ALA 100G TYR 100H TYR 100I ASP 100J MET 100K ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 MET 108 VAL 109 THR 110 VAL 111 SER 112 SER 113
Unit 9	GLN 1 SER 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 11 SER 12 ALA 13 ALA 14 PRO 15 GLY 16 GLN 17 LYS 18 VAL 19 THR 20 ILE 21 SER 22 CYS 23 SER 24 GLY 25 SER 26 SER 27 SER 27A ASN 27B ILE 28 GLY 29 ASN 30 ASN 31 TYR 32 VAL 33 SER 34 TRP 35 TYR 36 GLN 37 GLN 38 LEU 39 PRO 40 GLY 41 THR 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ASN 51 ASN 52 LYS 53 ARG 54 PRO 55 SER 56 GLY 57 ILE 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 LYS 66 SER 67 GLY 68 THR 69 SER 70 ALA 71 THR 72 LEU 73 GLY 74 ILE 75 THR 76 GLY 77 LEU 78 GLN 79 THR 80 GLY 81 ASP 82 GLU 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 GLY 89 THR 90 TRP 91 ASP 92 SER 93 SER 94 LEU 95 SER 95A ALA 95B TRP 96 VAL 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 THR 105 VAL 106 LEU 107
Unit 10	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 GLY 27 THR 28 PHE 29 SER 30 THR 31 TYR 32 GLY 33 ILE 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 ILE 51 ILE 52 PRO 52A ILE 53 PHE 54 ASP 55 THR 56 GLY 57 ASN 58 SER 59 ALA 60 GLN 61 SER 62 PHE 63 GLN 64 GLY 65 ARG 66 VAL 67 THR 68 ILE 69 THR 70 ALA 71 ASP 72 GLU 73 SER 74 THR 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A SER 82B LEU 82C ARG 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 SER 95 SER 96 ARG 97 ILE 98 TYR 99 ASP 100 LEU 100A ASN 100B PRO 100C SER 100D LEU 100E THR 100F ALA 100G TYR 100H TYR 100I ASP 100J MET 100K ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 MET 108 VAL 109 THR 110 VAL 111 SER 112 SER 113
Unit 11	GLN 1 SER 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 11 SER 12 ALA 13 ALA 14 PRO 15 GLY 16 GLN 17 LYS 18 VAL 19 THR 20 ILE 21 SER 22 CYS 23 SER 24 GLY 25 SER 26 SER 27 SER 27A ASN 27B ILE 28 GLY 29 ASN 30 ASN 31 TYR 32 VAL 33 SER 34 TRP 35 TYR 36 GLN 37 GLN 38 LEU 39 PRO 40 GLY 41 THR 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ASN 51 ASN 52 LYS 53 ARG 54 PRO 55 SER 56 GLY 57 ILE 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 LYS 66 SER 67 GLY 68 THR 69 SER 70 ALA 71 THR 72 LEU 73 GLY 74 ILE 75 THR 76 GLY 77 LEU 78 GLN 79 THR 80 GLY 81 ASP 82 GLU 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 GLY 89 THR 90 TRP 91 ASP 92 SER 93 SER 94 LEU 95 SER 95A ALA 95B TRP 96 VAL 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 THR 105 VAL 106 LEU 107
Unit 12	GLN 1 SER 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 11 SER 12 ALA 13 ALA 14 PRO 15 GLY 16 GLN 17 LYS 18 VAL 19 THR 20 ILE 21 SER 22 CYS 23 SER 24 GLY 25 SER 26 SER 27 SER 27A ASN 27B ILE 28 GLY 29 ASN 30 ASN 31 TYR 32 VAL 33 SER 34 TRP 35 TYR 36 GLN 37 GLN 38 LEU 39 PRO 40 GLY 41 THR 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ASN 51 ASN 52 LYS 53 ARG 54 PRO 55 SER 56 GLY 57 ILE 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 LYS 66 SER 67 GLY 68 THR 69 SER 70 ALA 71 THR 72 LEU 73 GLY 74 ILE 75 THR 76 GLY 77 LEU 78 GLN 79 THR 80 GLY 81 ASP 82 GLU 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 GLY 89 THR 90 TRP 91 ASP 92 SER 93 SER 94 LEU 95 SER 95A ALA 95B TRP 96 VAL 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 THR 105 VAL 106 LEU 107