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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF TRANSCRIPTION FLI1 IN COMPLEX WITH AN 11-MER DNA GACCGGAAGTG
Keywords TRANSCRIPTION, DNA BINDING, CANCER, EWING SARCOMA, TRANSCRIP COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5JVT     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 96 790 0
2  Other macromolecule   DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3')  B 11 228 0
3  Other macromolecule   DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3')  C 11 216 0
4  Protein    D 93 772 0
5  Other macromolecule   DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3')  E 11 227 0
6  Other macromolecule   DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3')  F 11 216 0
7  Protein    G 93 772 0
8  Other macromolecule   DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3')  H 11 227 0
9  Other macromolecule   DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3')  I 11 216 0
10  Ligand    D 1 0 5
11  Ligand    G 1 0 6
12 Water     2 0 2
total       352 3664 13
Proteins
Unit 1 GLY279 GLN280 ILE281 GLN282 LEU283 TRP284 GLN285 PHE286 LEU287 LEU288 GLU289 LEU290 LEU291 SER292 ASP293 SER294 ALA295 ASN296 ALA297 SER298 CYS299 ILE300 THR301 TRP302 GLU303 GLY304 THR305 ASN306 GLY307 GLU308 PHE309 LYS310 MET311 THR312 ASP313 PRO314 ASP315 GLU316 VAL317 ALA318 ARG319 ARG320 TRP321 GLY322 GLU323 ARG324 LYS325 SER326 LYS327 PRO328 ASN329 MET330 ASN331 TYR332 ASP333 LYS334 LEU335 SER336 ARG337 ALA338 LEU339 ARG340 TYR341 TYR342 TYR343 ASP344 LYS345 ASN346 ILE347 MET348 THR349 LYS350 VAL351 HIS352 GLY353 LYS354 ARG355 TYR356 ALA357 TYR358 LYS359 PHE360 ASP361 PHE362 HIS363 GLY364 ILE365 ALA366 GLN367 ALA368 LEU369 GLN370 PRO371 HIS372 PRO373 THR374
Unit 4 GLY279 GLN280 ILE281 GLN282 LEU283 TRP284 GLN285 PHE286 LEU287 LEU288 GLU289 LEU290 LEU291 SER292 ASP293 SER294 ALA295 ASN296 ALA297 SER298 CYS299 ILE300 THR301 TRP302 GLU303 GLY304 THR305 ASN306 GLY307 GLU308 PHE309 LYS310 MET311 THR312 ASP313 PRO314 ASP315 GLU316 VAL317 ALA318 ARG319 ARG320 TRP321 GLY322 GLU323 ARG324 LYS325 SER326 LYS327 PRO328 ASN329 MET330 ASN331 TYR332 ASP333 LYS334 LEU335 SER336 ARG337 ALA338 LEU339 ARG340 TYR341 TYR342 TYR343 ASP344 LYS345 ASN346 ILE347 MET348 THR349 LYS350 VAL351 HIS352 GLY353 LYS354 ARG355 TYR356 ALA357 TYR358 LYS359 PHE360 ASP361 PHE362 HIS363 GLY364 ILE365 ALA366 GLN367 ALA368 LEU369 GLN370 PRO371
Unit 7 GLY279 GLN280 ILE281 GLN282 LEU283 TRP284 GLN285 PHE286 LEU287 LEU288 GLU289 LEU290 LEU291 SER292 ASP293 SER294 ALA295 ASN296 ALA297 SER298 CYS299 ILE300 THR301 TRP302 GLU303 GLY304 THR305 ASN306 GLY307 GLU308 PHE309 LYS310 MET311 THR312 ASP313 PRO314 ASP315 GLU316 VAL317 ALA318 ARG319 ARG320 TRP321 GLY322 GLU323 ARG324 LYS325 SER326 LYS327 PRO328 ASN329 MET330 ASN331 TYR332 ASP333 LYS334 LEU335 SER336 ARG337 ALA338 LEU339 ARG340 TYR341 TYR342 TYR343 ASP344 LYS345 ASN346 ILE347 MET348 THR349 LYS350 VAL351 HIS352 GLY353 LYS354 ARG355 TYR356 ALA357 TYR358 LYS359 PHE360 ASP361 PHE362 HIS363 GLY364 ILE365 ALA366 GLN367 ALA368 LEU369 GLN370 PRO371
Other macromolecules
Unit 2 DG1 DA2 DC3 DC4 DG5 DG6 DA7 DA8 DG9 DT10 DG11
Unit 3 DC14 DA15 DC16 DT17 DT18 DC19 DC20 DG21 DG22 DT23 DC24
Unit 5 DG1 DA2 DC3 DC4 DG5 DG6 DA7 DA8 DG9 DT10 DG11
Unit 6 DC14 DA15 DC16 DT17 DT18 DC19 DC20 DG21 DG22 DT23 DC24
Unit 8 DG1 DA2 DC3 DC4 DG5 DG6 DA7 DA8 DG9 DT10 DG11
Unit 9 DC14 DA15 DC16 DT17 DT18 DC19 DC20 DG21 DG22 DT23 DC24
Ligands
Unit 10 PO4401
Unit 11 GOL401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany