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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF NEC3PO IN COMPLEX WITH SSRNA.
Keywords C3PO, COMPLEX, DNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NEQ131  A 186 1549 0
2  Protein   NEQ131  B 185 1532 0
3  Protein   NEQ131  C 186 1555 0
4  Protein   NEQ131  D 186 1554 0
5  DNA/RNA    E 7 133 0
6  Ligand   NEQ131  A 1 0 1
7  Ligand   NEQ131  B 1 0 1
8  Ligand   NEQ131  C 2 0 2
9  Ligand   NEQ131  D 1 0 1
10 Water     218 0 218
total       973 6323 223

Proteins
Unit 1 SER0 MET1 LEU2 PRO3 ASN4 LEU5 ASP6 ASN7 LEU8 LYS9 GLU10 GLU11 TYR12 GLN13 LYS14 LEU15 GLU16 GLU17 LYS18 LYS19 GLN20 GLU21 ILE22 VAL23 ASP24 ARG25 SER26 ILE27 ARG28 MET29 SER30 LYS31 LEU32 SER33 LYS34 SER35 LEU36 ILE37 TYR38 SER39 MET40 ILE41 ARG42 GLU43 ASP44 TYR45 LYS46 SER47 ALA48 ASP49 LYS50 TYR51 LYS52 GLU53 GLU54 LEU55 THR56 ASN57 LEU58 ALA59 LYS60 THR61 GLN62 ILE63 GLU64 GLU65 LEU66 LYS67 LYS68 TYR69 PRO70 MET71 PHE72 TYR73 SER74 ASN75 GLY76 PHE77 ILE78 GLY79 LEU80 GLN81 GLU82 TYR83 VAL84 GLU85 ALA86 LEU87 ALA88 LEU89 TYR90 TYR91 TYR92 ILE93 LYS94 GLU95 ASN96 ARG97 ILE98 PRO99 SER100 LYS101 GLU102 GLU103 LEU104 GLY105 VAL106 ASP107 THR108 TRP109 VAL110 TYR111 LEU112 PHE113 GLY114 ILE115 GLY116 ASP117 ILE118 ALA119 GLY120 GLU121 ILE122 LEU123 ARG124 LYS125 SER126 SER127 GLU128 GLU129 LEU130 ILE131 LYS132 GLY133 ASN134 ILE135 GLU136 TYR137 ALA138 LYS139 LYS140 ALA141 LYS142 GLN143 ASP144 LEU145 GLU146 SER147 LEU148 TYR149 LEU150 ASP151 LEU152 LEU153 TYR154 ILE155 GLU156 LEU157 LYS158 ASN159 PHE160 ASP161 LEU162 ARG163 ARG164 LYS165 LEU166 ASP167 TYR168 VAL169 SER170 ASN171 ILE172 ILE173 ASN174 LYS175 LEU176 ILE177 GLU178 PHE179 ILE180 ILE181 TRP182 LYS183 SER184 LYS185
Unit 2 SER0 MET1 LEU2 PRO3 ASN4 LEU5 ASP6 ASN7 LEU8 LYS9 GLU10 GLU11 TYR12 GLN13 LYS14 LEU15 GLU16 GLU17 LYS18 LYS19 GLN20 GLU21 ILE22 VAL23 ASP24 ARG25 SER26 ILE27 ARG28 MET29 SER30 LYS31 LEU32 SER33 LYS34 SER35 LEU36 ILE37 TYR38 SER39 MET40 ILE41 ARG42 GLU43 ASP44 TYR45 LYS46 SER47 ALA48 ASP49 LYS50 TYR51 LYS52 GLU53 GLU54 LEU55 THR56 ASN57 LEU58 ALA59 LYS60 THR61 GLN62 ILE63 GLU64 GLU65 LEU66 LYS67 LYS68 TYR69 PRO70 MET71 PHE72 TYR73 SER74 ASN75 GLY76 PHE77 ILE78 GLY79 LEU80 GLN81 GLU82 TYR83 VAL84 GLU85 ALA86 LEU87 ALA88 LEU89 TYR90 TYR91 TYR92 ILE93 LYS94 GLU95 ASN96 ARG97 ILE98 PRO99 SER100 LYS101 GLU102 GLU103 LEU104 GLY105 VAL106 ASP107 THR108 TRP109 VAL110 TYR111 LEU112 PHE113 GLY114 ILE115 GLY116 ASP117 ILE118 ALA119 GLY120 GLU121 ILE122 LEU123 ARG124 LYS125 SER126 SER127 GLU128 GLU129 LEU130 ILE131 LYS132 GLY133 ASN134 ILE135 GLU136 TYR137 ALA138 LYS139 LYS140 ALA141 LYS142 GLN143 ASP144 LEU145 GLU146 SER147 LEU148 TYR149 LEU150 ASP151 LEU152 LEU153 TYR154 ILE155 GLU156 LEU157 LYS158 ASN159 PHE160 ASP161 LEU162 ARG163 ARG164 LYS165 LEU166 ASP167 TYR168 VAL169 SER170 ASN171 ILE172 ILE173 ASN174 LYS175 LEU176 ILE177 GLU178 PHE179 ILE180 ILE181 TRP182 LYS183 SER184
Unit 3 SER0 MET1 LEU2 PRO3 ASN4 LEU5 ASP6 ASN7 LEU8 LYS9 GLU10 GLU11 TYR12 GLN13 LYS14 LEU15 GLU16 GLU17 LYS18 LYS19 GLN20 GLU21 ILE22 VAL23 ASP24 ARG25 SER26 ILE27 ARG28 MET29 SER30 LYS31 LEU32 SER33 LYS34 SER35 LEU36 ILE37 TYR38 SER39 MET40 ILE41 ARG42 GLU43 ASP44 TYR45 LYS46 SER47 ALA48 ASP49 LYS50 TYR51 LYS52 GLU53 GLU54 LEU55 THR56 ASN57 LEU58 ALA59 LYS60 THR61 GLN62 ILE63 GLU64 GLU65 LEU66 LYS67 LYS68 TYR69 PRO70 MET71 PHE72 TYR73 SER74 ASN75 GLY76 PHE77 ILE78 GLY79 LEU80 GLN81 GLU82 TYR83 VAL84 GLU85 ALA86 LEU87 ALA88 LEU89 TYR90 TYR91 TYR92 ILE93 LYS94 GLU95 ASN96 ARG97 ILE98 PRO99 SER100 LYS101 GLU102 GLU103 LEU104 GLY105 VAL106 ASP107 THR108 TRP109 VAL110 TYR111 LEU112 PHE113 GLY114 ILE115 GLY116 ASP117 ILE118 ALA119 GLY120 GLU121 ILE122 LEU123 ARG124 LYS125 SER126 SER127 GLU128 GLU129 LEU130 ILE131 LYS132 GLY133 ASN134 ILE135 GLU136 TYR137 ALA138 LYS139 LYS140 ALA141 LYS142 GLN143 ASP144 LEU145 GLU146 SER147 LEU148 TYR149 LEU150 ASP151 LEU152 LEU153 TYR154 ILE155 GLU156 LEU157 LYS158 ASN159 PHE160 ASP161 LEU162 ARG163 ARG164 LYS165 LEU166 ASP167 TYR168 VAL169 SER170 ASN171 ILE172 ILE173 ASN174 LYS175 LEU176 ILE177 GLU178 PHE179 ILE180 ILE181 TRP182 LYS183 SER184 LYS185
Unit 4 GLY-1 SER0 MET1 LEU2 PRO3 ASN4 LEU5 ASP6 ASN7 LEU8 LYS9 GLU10 GLU11 TYR12 GLN13 LYS14 LEU15 GLU16 GLU17 LYS18 LYS19 GLN20 GLU21 ILE22 VAL23 ASP24 ARG25 SER26 ILE27 ARG28 MET29 SER30 LYS31 LEU32 SER33 LYS34 SER35 LEU36 ILE37 TYR38 SER39 MET40 ILE41 ARG42 GLU43 ASP44 TYR45 LYS46 SER47 ALA48 ASP49 LYS50 TYR51 LYS52 GLU53 GLU54 LEU55 THR56 ASN57 LEU58 ALA59 LYS60 THR61 GLN62 ILE63 GLU64 GLU65 LEU66 LYS67 LYS68 TYR69 PRO70 MET71 PHE72 TYR73 SER74 ASN75 GLY76 PHE77 ILE78 GLY79 LEU80 GLN81 GLU82 TYR83 VAL84 GLU85 ALA86 LEU87 ALA88 LEU89 TYR90 TYR91 TYR92 ILE93 LYS94 GLU95 ASN96 ARG97 ILE98 PRO99 SER100 LYS101 GLU102 GLU103 LEU104 GLY105 VAL106 ASP107 THR108 TRP109 VAL110 TYR111 LEU112 PHE113 GLY114 ILE115 GLY116 ASP117 ILE118 ALA119 GLY120 GLU121 ILE122 LEU123 ARG124 LYS125 SER126 SER127 GLU128 GLU129 LEU130 ILE131 LYS132 GLY133 ASN134 ILE135 GLU136 TYR137 ALA138 LYS139 LYS140 ALA141 LYS142 GLN143 ASP144 LEU145 GLU146 SER147 LEU148 TYR149 LEU150 ASP151 LEU152 LEU153 TYR154 ILE155 GLU156 LEU157 LYS158 ASN159 PHE160 ASP161 LEU162 ARG163 ARG164 LYS165 LEU166 ASP167 TYR168 VAL169 SER170 ASN171 ILE172 ILE173 ASN174 LYS175 LEU176 ILE177 GLU178 PHE179 ILE180 ILE181 TRP182 LYS183 SER184

Nucleic acids
Unit 5 A1 A2 A3 A4 A5 A6 A7

Ligands
Unit 6 CA201
Unit 7 CA201
Unit 8 CA201 CA202
Unit 9 CA201

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany