5JQ6 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF CLFA IN COMPLEX WITH THE FAB FRAGMENT O TEFIBAZUMAB
• Keywords: STAPHYLOCOCCAL INFECTIONS, CLUMPING FACTOR A, FIBRINOGEN, TEFIBAZUMAB, AUREXIS, MSCRAMM, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5JQ6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CLUMPING FACTOR A	A	320	2393	0
2	Protein	TEFIBAZUMAB FAB FRAGMENT HEAVY CHAIN	H	204	1464	0
3	Protein	TEFIBAZUMAB FAB FRAGMENT LIGHT CHAIN	L	212	1489	0
4	Water			205	0	205
total				941	5346	205

Proteins

Unit 1	GLY 219 SER 220 HIS 221 HIS 222 HIS 223 HIS 224 HIS 225 HIS 226 GLY 227 SER 228 GLY 229 THR 230 ASP 231 ILE 232 THR 233 ASN 234 GLN 235 LEU 236 THR 237 ASN 238 VAL 239 THR 240 VAL 241 GLY 242 ILE 243 ASP 244 SER 245 GLY 246 THR 247 THR 248 VAL 249 TYR 250 PRO 251 HIS 252 GLN 253 ALA 254 GLY 255 TYR 256 VAL 257 LYS 258 LEU 259 ASN 260 TYR 261 GLY 262 PHE 263 SER 264 VAL 265 PRO 266 ASN 267 SER 268 ALA 269 VAL 270 LYS 271 GLY 272 ASP 273 THR 274 PHE 275 LYS 276 ILE 277 THR 278 VAL 279 PRO 280 LYS 281 GLU 282 LEU 283 ASN 284 LEU 285 ASN 286 GLY 287 VAL 288 THR 289 SER 290 THR 291 ALA 292 LYS 293 VAL 294 PRO 295 PRO 296 ILE 297 MET 298 GLN 302 VAL 303 LEU 304 ALA 305 ASN 306 GLY 307 VAL 308 ILE 309 ASP 310 SER 311 ASP 312 GLY 313 ASN 314 VAL 315 ILE 316 TYR 317 THR 318 PHE 319 THR 320 ASP 321 TYR 322 VAL 323 ASN 324 THR 325 LYS 326 CYS 327 ASP 328 VAL 329 LYS 330 ALA 331 THR 332 LEU 333 THR 334 MET 335 PRO 336 ALA 337 TYR 338 ILE 339 ASP 340 PRO 341 GLU 342 ASN 343 VAL 344 LYS 345 LYS 346 THR 347 GLY 348 ASN 349 VAL 350 THR 351 LEU 352 ALA 353 THR 354 GLY 355 ILE 356 GLY 357 SER 358 THR 359 THR 360 ALA 361 ASN 362 LYS 363 THR 364 VAL 365 LEU 366 VAL 367 ASP 368 TYR 369 GLU 370 LYS 371 TYR 372 GLY 373 LYS 374 PHE 375 TYR 376 ASN 377 LEU 378 SER 379 ILE 380 LYS 381 GLY 382 THR 383 ILE 384 ASP 385 GLN 386 ILE 387 ASP 388 LYS 389 THR 390 ASN 391 ASN 392 THR 393 TYR 394 ARG 395 GLN 396 THR 397 ILE 398 TYR 399 VAL 400 ASN 401 PRO 402 SER 403 GLY 404 ASP 405 ASN 406 VAL 407 ILE 408 ALA 409 PRO 410 VAL 411 LEU 412 THR 413 GLY 414 ASN 415 LEU 416 LYS 417 PRO 418 ASN 419 THR 420 ASP 421 SER 422 ASN 423 ALA 424 LEU 425 ILE 426 ASP 427 GLN 428 GLN 429 ASN 430 THR 431 SER 432 ILE 433 LYS 434 VAL 435 TYR 436 LYS 437 VAL 438 ASP 439 ASN 440 ALA 441 ALA 442 ASP 443 LEU 444 SER 445 GLU 446 SER 447 TYR 448 PHE 449 VAL 450 ASN 451 PRO 452 GLU 453 ASN 454 PHE 455 GLU 456 ASP 457 VAL 458 THR 459 ASN 460 SER 461 VAL 462 ASN 463 ILE 464 THR 465 PHE 466 PRO 467 ASN 468 PRO 469 ASN 470 GLN 471 TYR 472 LYS 473 VAL 474 GLU 475 PHE 476 ASN 477 THR 478 PRO 479 ASP 480 ASP 481 GLN 482 ILE 483 THR 484 THR 485 PRO 486 TYR 487 ILE 488 VAL 489 VAL 490 VAL 491 ASN 492 GLY 493 HIS 494 ILE 495 ASP 496 PRO 497 ASN 498 SER 499 LYS 500 GLY 501 ASP 502 LEU 503 ALA 504 LEU 505 ARG 506 SER 507 THR 508 LEU 509 TYR 510 GLY 511 TYR 512 ASN 513 SER 514 ASN 515 ILE 516 ILE 517 TRP 518 ARG 519 SER 520 MET 521 SER 522 TRP 523 ASP 524 ASN 525 GLU 526 VAL 527 ALA 528 PHE 529 ASN 530 ASN 531 GLY 532 SER 533 GLY 534 SER 535 GLY 536 ASP 537 GLY 538 ILE 539 ASP 540 CYS 541
Unit 2	GLN 1 VAL 2 GLN 3 LEU 4 LYS 5 GLU 6 SER 7 GLY 8 PRO 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 SER 15 GLN 16 THR 17 LEU 18 SER 19 ILE 20 THR 21 CYS 22 THR 23 ILE 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 SER 30 ARG 31 TYR 32 SER 33 VAL 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 PRO 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 LEU 48 GLY 49 MET 50 ILE 51 TRP 52 GLY 53 GLY 54 GLY 55 ASN 56 THR 57 ASP 58 TYR 59 ASN 60 SER 61 ALA 62 LEU 63 LYS 64 SER 65 ARG 66 LEU 67 SER 68 ILE 69 SER 70 LYS 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 GLN 77 VAL 78 PHE 79 LEU 80 LYS 81 MET 82 ASN 83 SER 84 LEU 85 THR 86 ALA 87 ALA 88 ASP 89 THR 90 ALA 91 VAL 92 TYR 93 TYR 94 CYS 95 ALA 96 ARG 97 LYS 98 GLY 99 GLU 100 PHE 101 TYR 102 TYR 103 GLY 104 TYR 105 ASP 106 GLY 107 PHE 108 VAL 109 TYR 110 TRP 111 GLY 112 GLN 113 GLY 114 THR 115 LEU 116 VAL 117 THR 118 VAL 119 SER 120 SER 121 ALA 122 SER 123 THR 124 LYS 125 GLY 126 PRO 127 SER 128 VAL 129 PHE 130 PRO 131 LEU 132 ALA 133 PRO 134 ALA 145 LEU 146 GLY 147 CYS 148 LEU 149 VAL 150 LYS 151 ASP 152 TYR 153 PHE 154 PRO 155 GLU 156 PRO 157 VAL 158 THR 159 VAL 160 SER 161 TRP 162 ASN 163 SER 164 GLY 165 ALA 166 LEU 167 THR 168 SER 169 GLY 170 VAL 171 HIS 172 THR 173 PHE 174 PRO 175 ALA 176 VAL 177 LEU 178 GLN 179 SER 180 SER 181 GLY 182 LEU 183 TYR 184 SER 185 LEU 186 SER 187 SER 188 VAL 189 VAL 190 THR 191 VAL 192 PRO 193 SER 195 SER 196 TYR 202 ILE 203 CYS 204 ASN 205 VAL 206 ASN 207 HIS 208 LYS 209 PRO 210 SER 211 ASN 212 THR 213 LYS 214 VAL 215 ASP 216 LYS 217 ARG 218 ALA 219 GLU 220
Unit 3	ASP 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 ASP 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 VAL 19 THR 20 MET 21 ASN 22 CYS 23 LYS 24 SER 25 SER 26 GLN 27 SER 28 VAL 29 LEU 30 TYR 31 SER 32 SER 33 ASN 34 GLN 35 LYS 36 ASN 37 TYR 38 LEU 39 ALA 40 TRP 41 TYR 42 GLN 43 GLN 44 LYS 45 PRO 46 GLY 47 GLN 48 SER 49 PRO 50 LYS 51 LEU 52 LEU 53 ILE 54 TYR 55 TRP 56 ALA 57 SER 58 THR 59 ARG 60 GLU 61 SER 62 GLY 63 VAL 64 PRO 65 ASP 66 ARG 67 PHE 68 SER 69 GLY 70 SER 71 GLY 72 SER 73 GLY 74 THR 75 ASP 76 PHE 77 THR 78 LEU 79 THR 80 ILE 81 SER 82 SER 83 VAL 84 GLN 85 ALA 86 GLU 87 ASP 88 LEU 89 ALA 90 VAL 91 TYR 92 TYR 93 CYS 94 HIS 95 GLN 96 TYR 97 LEU 98 SER 99 SER 100 TYR 101 THR 102 PHE 103 GLY 104 GLY 105 GLY 106 THR 107 LYS 108 LEU 109 GLU 110 ILE 111 LYS 112 ARG 113 THR 114 VAL 115 ALA 116 ALA 117 PRO 118 SER 119 VAL 120 PHE 121 ILE 122 PHE 123 PRO 124 PRO 125 SER 126 ASP 127 GLU 128 GLN 129 LEU 130 LYS 131 SER 132 GLY 133 THR 134 ALA 135 SER 136 VAL 137 VAL 138 CYS 139 LEU 140 LEU 141 ASN 142 ASN 143 PHE 144 TYR 145 PRO 146 ARG 147 GLU 148 ALA 149 LYS 150 VAL 151 GLN 152 TRP 153 LYS 154 VAL 155 ASN 157 ALA 158 LEU 159 GLN 160 SER 161 GLY 162 ASN 163 SER 164 GLN 165 GLU 166 SER 167 VAL 168 THR 169 GLU 170 GLN 171 ASP 172 SER 173 LYS 174 ASP 175 SER 176 THR 177 TYR 178 SER 179 LEU 180 SER 181 SER 182 THR 183 LEU 184 THR 185 LEU 186 SER 187 LYS 188 ALA 189 ASP 190 TYR 191 GLU 192 LYS 193 HIS 194 LYS 195 VAL 196 TYR 197 ALA 198 CYS 199 GLU 200 VAL 201 THR 202 HIS 203 GLN 204 GLY 205 PRO 209 VAL 210 THR 211 LYS 212 SER 213 ALA 214 ASN 215 ARG 216