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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE MITOCHONDRIAL DNA PACKAGING PROTEIN COMPLEX WITH DNA AT 2.18 ANGSTROM RESOLUTION
Keywords DNA BINDING PROTEIN, DNA PACKAGING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5JH0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ARS-BINDING FACTOR 2, MITOCHONDRIAL  A 156 1306 0
2  Other macromolecule   DNA (5'- D(*AP*AP*TP*AP*AP*TP*AP*AP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP 3')  B 22 451 0
3  Other macromolecule   DNA (5'- D(*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*TP*TP*AP*TP*TP 3')  C 22 445 0
4  Protein   ARS-BINDING FACTOR 2, MITOCHONDRIAL  D 157 1316 0
5  Other macromolecule   DNA (5'- D(*AP*AP*TP*AP*AP*TP*AP*AP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP 3')  E 22 451 0
6  Other macromolecule   DNA (5'- D(*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*TP*TP*AP*TP*TP 3')  F 22 445 0
7 Water     75 0 75
total       476 4414 75

Proteins
Unit 1 LYS27 ALA28 SER29 LYS30 ARG31 THR32 GLN33 LEU34 ARG35 ASN36 GLU37 LEU38 ILE39 LYS40 GLN41 GLY42 PRO43 LYS44 ARG45 PRO46 THR47 SER48 ALA49 TYR50 PHE51 LEU52 TYR53 LEU54 GLN55 ASP56 HIS57 ARG58 SER59 GLN60 PHE61 VAL62 LYS63 GLU64 ASN65 PRO66 THR67 LEU68 ARG69 PRO70 ALA71 GLU72 ILE73 SER74 LYS75 ILE76 ALA77 GLY78 GLU79 LYS80 TRP81 GLN82 ASN83 LEU84 GLU85 ALA86 ASP87 ILE88 LYS89 GLU90 LYS91 TYR92 ILE93 SER94 GLU95 ARG96 LYS97 LYS98 LEU99 TYR100 SER101 GLU102 TYR103 GLN104 LYS105 ALA106 LYS107 LYS108 GLU109 PHE110 ASP111 GLU112 LYS113 LEU114 PRO115 PRO116 LYS117 LYS118 PRO119 ALA120 GLY121 PRO122 PHE123 ILE124 LYS125 TYR126 ALA127 ASN128 GLU129 VAL130 ARG131 SER132 GLN133 VAL134 PHE135 ALA136 GLN137 HIS138 PRO139 ASP140 LYS141 SER142 GLN143 LEU144 ASP145 LEU146 MET147 LYS148 ILE149 ILE150 GLY151 ASP152 LYS153 TRP154 GLN155 SER156 LEU157 ASP158 GLN159 SER160 ILE161 LYS162 ASP163 LYS164 TYR165 ILE166 GLN167 GLU168 TYR169 LYS170 LYS171 ALA172 ILE173 GLN174 GLU175 TYR176 ASN177 ALA178 ARG179 TYR180 PRO181 LEU182
Unit 4 HIS-1 HIS0 LYS27 ALA28 SER29 LYS30 ARG31 THR32 GLN33 LEU34 ARG35 ASN36 GLU37 LEU38 ILE39 LYS40 GLN41 GLY42 PRO43 LYS44 ARG45 PRO46 THR47 SER48 ALA49 TYR50 PHE51 LEU52 TYR53 LEU54 GLN55 ASP56 HIS57 ARG58 SER59 GLN60 PHE61 VAL62 LYS63 GLU64 ASN65 PRO66 THR67 LEU68 ARG69 PRO70 ALA71 GLU72 ILE73 SER74 LYS75 ILE76 ALA77 GLY78 GLU79 LYS80 TRP81 GLN82 ASN83 LEU84 GLU85 ALA86 ASP87 ILE88 LYS89 GLU90 LYS91 TYR92 ILE93 SER94 GLU95 ARG96 LYS97 LYS98 LEU99 TYR100 SER101 GLU102 TYR103 GLN104 LYS105 ALA106 LYS107 LYS108 GLU109 PHE110 ASP111 GLU112 LYS113 LEU114 PRO115 PRO116 LYS117 LYS118 PRO119 ALA120 GLY121 PRO122 PHE123 ILE124 LYS125 TYR126 ALA127 ASN128 GLU129 VAL130 ARG131 SER132 GLN133 VAL134 PHE135 ALA136 GLN137 HIS138 PRO139 ASP140 LYS141 SER142 GLN143 LEU144 ASP145 LEU146 MET147 LYS148 ILE149 ILE150 GLY151 ASP152 LYS153 TRP154 GLN155 SER156 LEU157 ASP158 GLN159 SER160 ILE161 LYS162 ASP163 LYS164 TYR165 ILE166 GLN167 GLU168 TYR169 LYS170 LYS171 ALA172 ILE173 GLN174 GLU175 TYR176 ASN177 ALA178 ARG179 TYR180 PRO181

Other macromolecules
Unit 2 DA1 DA2 DT3 DA4 DA5 DT6 DA7 DA8 DA9 DT10 DT11 DA12 DT13 DA14 DT15 DA16 DA17 DT18 DA19 DT20 DA21 DA22
Unit 3 DT1 DT2 DA3 DT4 DA5 DT6 DT7 DA8 DT9 DA10 DT11 DA12 DA13 DT14 DT15 DT16 DA17 DT18 DT19 DA20 DT21 DT22
Unit 5 DA1 DA2 DT3 DA4 DA5 DT6 DA7 DA8 DA9 DT10 DT11 DA12 DT13 DA14 DT15 DA16 DA17 DT18 DA19 DT20 DA21 DA22
Unit 6 DT1 DT2 DA3 DT4 DA5 DT6 DT7 DA8 DT9 DA10 DT11 DA12 DA13 DT14 DT15 DT16 DA17 DT18 DT19 DA20 DT21 DT22

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany