5JA8 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE HIGB2 TOXIN IN COMPLEX WITH NB2
• Keywords: TOXIN-ANTITOXIN SYSTEM, TOXIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5JA8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TOXIN HIGB-2	A	105	847	0
2	Protein	NANOBODY 2	B	121	920	0
3	Protein	TOXIN HIGB-2	C	108	870	0
4	Protein	NANOBODY 2	D	127	980	0
5	Protein	TOXIN HIGB-2	E	107	861	0
6	Protein	NANOBODY 2	F	127	980	0
7	Protein	TOXIN HIGB-2	G	105	863	0
8	Protein	NANOBODY 2	H	122	925	0
9	Ligand	TOXIN HIGB-2	A	3	0	17
10	Ligand	NANOBODY 2	B	2	0	15
11	Ligand	TOXIN HIGB-2	C	2	0	10
12	Ligand	NANOBODY 2	D	4	0	55
13	Ligand	TOXIN HIGB-2	E	2	0	10
14	Ligand	NANOBODY 2	F	1	0	32
15	Ligand	TOXIN HIGB-2	G	2	0	18
16	Water			130	0	130
total				1068	7246	287

Proteins

Unit 1	HIS 0 MET 1 LYS 2 SER 3 VAL 4 PHE 5 VAL 6 GLU 7 SER 8 THR 9 ILE 10 PHE 11 GLU 12 LYS 13 TYR 14 ARG 15 ASP 16 GLU 17 TYR 18 LEU 19 SER 20 ASP 21 GLU 22 GLU 23 TYR 24 ARG 25 LEU 26 PHE 27 GLN 28 ALA 29 GLU 30 LEU 31 MET 32 LEU 33 ASN 34 PRO 35 LYS 36 LEU 37 GLY 38 ASP 39 VAL 40 ILE 41 GLN 42 GLY 43 THR 44 GLY 45 GLY 46 LEU 47 ARG 48 LYS 49 ILE 50 ARG 51 VAL 52 ALA 53 SER 54 ARG 60 GLY 61 GLY 62 SER 63 ARG 64 ILE 65 ILE 66 TYR 67 TYR 68 PHE 69 LEU 70 ASP 71 GLU 72 LYS 73 ARG 74 ARG 75 PHE 76 TYR 77 LEU 78 LEU 79 THR 80 ILE 81 TYR 82 GLY 83 LYS 84 ASN 85 GLU 86 MET 87 SER 88 ASP 89 LEU 90 ASN 91 ALA 92 ASN 93 GLN 94 ARG 95 LYS 96 GLN 97 LEU 98 MET 99 ALA 100 PHE 101 MET 102 GLU 103 ALA 104 TRP 105 ARG 106 ASN 107 GLU 108 GLN 109
Unit 2	GLN 2 VAL 3 GLN 4 LEU 5 GLN 6 GLU 7 SER 8 GLY 9 GLY 10 GLY 11 LEU 12 VAL 13 GLN 14 PRO 15 GLY 16 GLY 17 SER 18 LEU 19 ARG 20 LEU 21 SER 22 CYS 23 ALA 24 ALA 25 SER 26 GLY 27 PHE 28 THR 29 LEU 30 ASP 31 TYR 32 TYR 33 ALA 34 ILE 35 GLY 36 TRP 37 PHE 38 ARG 39 GLN 40 ALA 41 PRO 42 GLY 43 LYS 44 GLU 45 ARG 46 GLU 47 GLY 48 VAL 49 SER 50 CYS 51 ILE 52 SER 53 SER 54 SER 55 GLY 56 GLY 57 THR 58 THR 59 ASN 60 TYR 61 ALA 62 ASP 63 SER 64 VAL 65 LYS 66 GLY 67 ARG 68 PHE 69 THR 70 VAL 71 SER 72 ARG 73 ASP 74 ASN 75 ALA 76 LYS 77 ASN 78 THR 79 VAL 80 TYR 81 LEU 82 GLN 83 MET 84 ASN 85 SER 86 LEU 87 LYS 88 PRO 89 GLU 90 ASP 91 THR 92 ALA 93 VAL 94 TYR 95 TYR 96 CYS 97 VAL 98 ALA 99 ASP 100 PHE 101 ALA 102 CYS 103 PRO 104 LEU 105 ILE 106 ARG 107 GLU 108 TYR 109 ASP 110 TYR 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 GLN 117 VAL 118 THR 119 VAL 120 SER 121 SER 122
Unit 3	HIS 0 MET 1 LYS 2 SER 3 VAL 4 PHE 5 VAL 6 GLU 7 SER 8 THR 9 ILE 10 PHE 11 GLU 12 LYS 13 TYR 14 ARG 15 ASP 16 GLU 17 TYR 18 LEU 19 SER 20 ASP 21 GLU 22 GLU 23 TYR 24 ARG 25 LEU 26 PHE 27 GLN 28 ALA 29 GLU 30 LEU 31 MET 32 LEU 33 ASN 34 PRO 35 LYS 36 LEU 37 GLY 38 ASP 39 VAL 40 ILE 41 GLN 42 GLY 43 THR 44 GLY 45 GLY 46 LEU 47 ARG 48 LYS 49 ILE 50 ARG 51 VAL 52 ALA 53 SER 54 LYS 55 LYS 59 ARG 60 GLY 61 GLY 62 SER 63 ARG 64 ILE 65 ILE 66 TYR 67 TYR 68 PHE 69 LEU 70 ASP 71 GLU 72 LYS 73 ARG 74 ARG 75 PHE 76 TYR 77 LEU 78 LEU 79 THR 80 ILE 81 TYR 82 GLY 83 LYS 84 ASN 85 GLU 86 MET 87 SER 88 ASP 89 LEU 90 ASN 91 ALA 92 ASN 93 GLN 94 ARG 95 LYS 96 GLN 97 LEU 98 MET 99 ALA 100 PHE 101 MET 102 GLU 103 ALA 104 TRP 105 ARG 106 ASN 107 GLU 108 GLN 109 SER 110
Unit 4	GLN 2 VAL 3 GLN 4 LEU 5 GLN 6 GLU 7 SER 8 GLY 9 GLY 10 GLY 11 LEU 12 VAL 13 GLN 14 PRO 15 GLY 16 GLY 17 SER 18 LEU 19 ARG 20 LEU 21 SER 22 CYS 23 ALA 24 ALA 25 SER 26 GLY 27 PHE 28 THR 29 LEU 30 ASP 31 TYR 32 TYR 33 ALA 34 ILE 35 GLY 36 TRP 37 PHE 38 ARG 39 GLN 40 ALA 41 PRO 42 GLY 43 LYS 44 GLU 45 ARG 46 GLU 47 GLY 48 VAL 49 SER 50 CYS 51 ILE 52 SER 53 SER 54 SER 55 GLY 56 GLY 57 THR 58 THR 59 ASN 60 TYR 61 ALA 62 ASP 63 SER 64 VAL 65 LYS 66 GLY 67 ARG 68 PHE 69 THR 70 VAL 71 SER 72 ARG 73 ASP 74 ASN 75 ALA 76 LYS 77 ASN 78 THR 79 VAL 80 TYR 81 LEU 82 GLN 83 MET 84 ASN 85 SER 86 LEU 87 LYS 88 PRO 89 GLU 90 ASP 91 THR 92 ALA 93 VAL 94 TYR 95 TYR 96 CYS 97 VAL 98 ALA 99 ASP 100 PHE 101 ALA 102 CYS 103 PRO 104 LEU 105 ILE 106 ARG 107 GLU 108 TYR 109 ASP 110 TYR 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 GLN 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 HIS 123 HIS 124 HIS 125 HIS 126 HIS 127 HIS 128
Unit 5	HIS 0 MET 1 LYS 2 SER 3 VAL 4 PHE 5 VAL 6 GLU 7 SER 8 THR 9 ILE 10 PHE 11 GLU 12 LYS 13 TYR 14 ARG 15 ASP 16 GLU 17 TYR 18 LEU 19 SER 20 ASP 21 GLU 22 GLU 23 TYR 24 ARG 25 LEU 26 PHE 27 GLN 28 ALA 29 GLU 30 LEU 31 MET 32 LEU 33 ASN 34 PRO 35 LYS 36 LEU 37 GLY 38 ASP 39 VAL 40 ILE 41 GLN 42 GLY 43 THR 44 GLY 45 GLY 46 LEU 47 ARG 48 LYS 49 ILE 50 ARG 51 VAL 52 ALA 53 SER 54 LYS 55 ARG 60 GLY 61 GLY 62 SER 63 ARG 64 ILE 65 ILE 66 TYR 67 TYR 68 PHE 69 LEU 70 ASP 71 GLU 72 LYS 73 ARG 74 ARG 75 PHE 76 TYR 77 LEU 78 LEU 79 THR 80 ILE 81 TYR 82 GLY 83 LYS 84 ASN 85 GLU 86 MET 87 SER 88 ASP 89 LEU 90 ASN 91 ALA 92 ASN 93 GLN 94 ARG 95 LYS 96 GLN 97 LEU 98 MET 99 ALA 100 PHE 101 MET 102 GLU 103 ALA 104 TRP 105 ARG 106 ASN 107 GLU 108 GLN 109 SER 110
Unit 6	GLN 2 VAL 3 GLN 4 LEU 5 GLN 6 GLU 7 SER 8 GLY 9 GLY 10 GLY 11 LEU 12 VAL 13 GLN 14 PRO 15 GLY 16 GLY 17 SER 18 LEU 19 ARG 20 LEU 21 SER 22 CYS 23 ALA 24 ALA 25 SER 26 GLY 27 PHE 28 THR 29 LEU 30 ASP 31 TYR 32 TYR 33 ALA 34 ILE 35 GLY 36 TRP 37 PHE 38 ARG 39 GLN 40 ALA 41 PRO 42 GLY 43 LYS 44 GLU 45 ARG 46 GLU 47 GLY 48 VAL 49 SER 50 CYS 51 ILE 52 SER 53 SER 54 SER 55 GLY 56 GLY 57 THR 58 THR 59 ASN 60 TYR 61 ALA 62 ASP 63 SER 64 VAL 65 LYS 66 GLY 67 ARG 68 PHE 69 THR 70 VAL 71 SER 72 ARG 73 ASP 74 ASN 75 ALA 76 LYS 77 ASN 78 THR 79 VAL 80 TYR 81 LEU 82 GLN 83 MET 84 ASN 85 SER 86 LEU 87 LYS 88 PRO 89 GLU 90 ASP 91 THR 92 ALA 93 VAL 94 TYR 95 TYR 96 CYS 97 VAL 98 ALA 99 ASP 100 PHE 101 ALA 102 CYS 103 PRO 104 LEU 105 ILE 106 ARG 107 GLU 108 TYR 109 ASP 110 TYR 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 GLN 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 HIS 123 HIS 124 HIS 125 HIS 126 HIS 127 HIS 128
Unit 7	HIS 0 MET 1 LYS 2 SER 3 VAL 4 PHE 5 VAL 6 GLU 7 SER 8 THR 9 ILE 10 PHE 11 GLU 12 LYS 13 TYR 14 ARG 15 ASP 16 GLU 17 TYR 18 LEU 19 SER 20 ASP 21 GLU 22 GLU 23 TYR 24 ARG 25 LEU 26 PHE 27 GLN 28 ALA 29 GLU 30 LEU 31 MET 32 LEU 33 ASN 34 PRO 35 LYS 36 LEU 37 GLY 38 ASP 39 VAL 40 ILE 41 GLN 42 GLY 43 THR 44 GLY 45 GLY 46 LEU 47 ARG 48 LYS 49 ILE 50 ARG 51 VAL 52 ALA 53 SER 54 GLY 61 GLY 62 SER 63 ARG 64 ILE 65 ILE 66 TYR 67 TYR 68 PHE 69 LEU 70 ASP 71 GLU 72 LYS 73 ARG 74 ARG 75 PHE 76 TYR 77 LEU 78 LEU 79 THR 80 ILE 81 TYR 82 GLY 83 LYS 84 ASN 85 GLU 86 MET 87 SER 88 ASP 89 LEU 90 ASN 91 ALA 92 ASN 93 GLN 94 ARG 95 LYS 96 GLN 97 LEU 98 MET 99 ALA 100 PHE 101 MET 102 GLU 103 ALA 104 TRP 105 ARG 106 ASN 107 GLU 108 GLN 109 SER 110
Unit 8	GLN 2 VAL 3 GLN 4 LEU 5 GLN 6 GLU 7 SER 8 GLY 9 GLY 10 GLY 11 LEU 12 VAL 13 GLN 14 PRO 15 GLY 16 GLY 17 SER 18 LEU 19 ARG 20 LEU 21 SER 22 CYS 23 ALA 24 ALA 25 SER 26 GLY 27 PHE 28 THR 29 LEU 30 ASP 31 TYR 32 TYR 33 ALA 34 ILE 35 GLY 36 TRP 37 PHE 38 ARG 39 GLN 40 ALA 41 PRO 42 GLY 43 LYS 44 GLU 45 ARG 46 GLU 47 GLY 48 VAL 49 SER 50 CYS 51 ILE 52 SER 53 SER 54 SER 55 GLY 56 GLY 57 THR 58 THR 59 ASN 60 TYR 61 ALA 62 ASP 63 SER 64 VAL 65 LYS 66 GLY 67 ARG 68 PHE 69 THR 70 VAL 71 SER 72 ARG 73 ASP 74 ASN 75 ALA 76 LYS 77 ASN 78 THR 79 VAL 80 TYR 81 LEU 82 GLN 83 MET 84 ASN 85 SER 86 LEU 87 LYS 88 PRO 89 GLU 90 ASP 91 THR 92 ALA 93 VAL 94 TYR 95 TYR 96 CYS 97 VAL 98 ALA 99 ASP 100 PHE 101 ALA 102 CYS 103 PRO 104 LEU 105 ILE 106 ARG 107 GLU 108 TYR 109 ASP 110 TYR 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 GLN 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 HIS 123

Ligands

Unit 9	PO4 201 PO4 202 ACT 203
Unit 10	PO4 201 EDO 202
Unit 11	PO4 201 PO4 202
Unit 12	EPE 201 PO4 202 PO4 203 PDO 204
Unit 13	PO4 201 PO4 202
Unit 14	EPE 201
Unit 15	PO4 201 PDO 202