5J5J - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A CHIMERA OF HUMAN DESMOCOLLIN-2 EC1 AN DESMOGLEIN-2 EC2-EC5
• Keywords: EXTRACELLULAR CADHERIN DOMAIN, CELL ADHESION, DESMOSOME, CEL
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5J5J	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DESMOCOLLIN-2,DESMOGLEIN-2	A	552	8608	0
2	Ligand		B	8	0	200
3	Ligand		C	6	0	143
4	Ligand		D	2	0	56
5	Ligand	DESMOCOLLIN-2,DESMOGLEIN-2	A	18	0	135
6	Water			9	0	9
total				595	8608	543

Proteins

Unit 1

ARG 1 TRP 2 ALA 3 PRO 4 ILE 5 PRO 6 CYS 7 SER 8 MET 9 LEU 10 GLU 11 ASN 12 SER 13 LEU 14 GLY 15 PRO 16 PHE 17 PRO 18 LEU 19 PHE 20 LEU 21 GLN 22 GLN 23 VAL 24 GLN 25 SER 26 ASP 27 THR 28 ALA 29 GLN 30 ASN 31 TYR 32 THR 33 ILE 34 TYR 35 TYR 36 SER 37 ILE 38 ARG 39 GLY 40 PRO 41 GLY 42 VAL 43 ASP 44 GLN 45 GLU 46 PRO 47 ARG 48 ASN 49 LEU 50 PHE 51 TYR 52 VAL 53 GLU 54 ARG 55 ASP 56 THR 57 GLY 58 ASN 59 LEU 60 TYR 61 CYS 62 THR 63 ARG 64 PRO 65 VAL 66 ASP 67 ARG 68 GLU 69 GLN 70 TYR 71 GLU 72 SER 73 PHE 74 GLU 75 ILE 76 ILE 77 ALA 78 PHE 79 ALA 80 THR 81 THR 82 PRO 83 ASP 84 GLY 85 TYR 86 THR 87 PRO 88 GLU 89 LEU 90 PRO 91 LEU 92 PRO 93 LEU 94 ILE 95 ILE 96 LYS 97 ILE 98 GLU 99 ASP 100 ILE 101 ASN 102 ASP 103 ASN 104 GLU 105 PRO 106 VAL 107 PHE 108 THR 109 GLN 110 ASP 111 VAL 112 PHE 113 VAL 114 GLY 115 SER 116 VAL 117 GLU 118 GLU 119 LEU 120 SER 121 ALA 122 ALA 123 HIS 124 THR 125 LEU 126 VAL 127 MET 128 LYS 129 ILE 130 ASN 131 ALA 132 THR 133 ASP 134 ALA 135 ASP 136 GLU 137 PRO 138 ASN 139 THR 140 LEU 141 ASN 142 SER 143 LYS 144 ILE 145 SER 146 TYR 147 ARG 148 ILE 149 VAL 150 SER 151 LEU 152 GLU 153 PRO 154 ALA 155 TYR 156 PRO 157 PRO 158 VAL 159 PHE 160 TYR 161 LEU 162 ASN 163 LYS 164 ASP 165 THR 166 GLY 167 GLU 168 ILE 169 TYR 170 THR 171 THR 172 SER 173 VAL 174 THR 175 LEU 176 ASP 177 ARG 178 GLU 179 GLU 180 HIS 181 SER 182 SER 183 TYR 184 THR 185 LEU 186 THR 187 VAL 188 GLU 189 ALA 190 ARG 191 ASP 192 GLY 193 ASN 194 GLY 195 GLU 196 VAL 197 THR 198 ASP 199 LYS 200 PRO 201 VAL 202 LYS 203 GLN 204 ALA 205 GLN 206 VAL 207 GLN 208 ILE 209 ARG 210 ILE 211 LEU 212 ASP 213 VAL 214 ASN 215 ASP 216 ASN 217 ILE 218 PRO 219 VAL 220 VAL 221 GLU 222 ASN 223 LYS 224 VAL 225 LEU 226 GLU 227 GLY 228 MET 229 VAL 230 GLU 231 GLU 232 ASN 233 GLN 234 VAL 235 ASN 236 VAL 237 GLU 238 VAL 239 THR 240 ARG 241 ILE 242 LYS 243 VAL 244 PHE 245 ASP 246 ALA 247 ASP 248 GLU 249 ILE 250 GLY 251 SER 252 ASP 253 ASN 254 TRP 255 LEU 256 ALA 257 ASN 258 PHE 259 THR 260 PHE 261 ALA 262 SER 263 GLY 264 ASN 265 GLU 266 GLY 267 GLY 268 TYR 269 PHE 270 HIS 271 ILE 272 GLU 273 THR 274 ASP 275 ALA 276 GLN 277 THR 278 ASN 279 GLU 280 GLY 281 ILE 282 VAL 283 THR 284 LEU 285 ILE 286 LYS 287 GLU 288 VAL 289 ASP 290 TYR 291 GLU 292 GLU 293 MET 294 LYS 295 ASN 296 LEU 297 ASP 298 PHE 299 SER 300 VAL 301 ILE 302 VAL 303 ALA 304 ASN 305 LYS 306 ALA 307 ALA 308 PHE 309 HIS 310 LYS 311 SER 312 ILE 313 ARG 314 SER 315 LYS 316 TYR 317 LYS 318 PRO 319 THR 320 PRO 321 ILE 322 PRO 323 ILE 324 LYS 325 VAL 326 LYS 327 VAL 328 LYS 329 ASN 330 VAL 331 LYS 332 GLU 333 GLY 334 ILE 335 HIS 336 PHE 337 LYS 338 SER 339 SER 340 VAL 341 ILE 342 SER 343 ILE 344 TYR 345 VAL 346 SER 347 GLU 348 SER 349 MET 350 ASP 351 ARG 352 SER 353 SER 354 LYS 355 GLY 356 GLN 357 ILE 358 ILE 359 GLY 360 ASN 361 PHE 362 GLN 363 ALA 364 PHE 365 ASP 366 GLU 367 ASP 368 THR 369 GLY 370 LEU 371 PRO 372 ALA 373 HIS 374 ALA 375 ARG 376 TYR 377 VAL 378 LYS 379 LEU 380 GLU 381 ASP 382 ARG 383 ASP 384 ASN 385 TRP 386 ILE 387 SER 388 VAL 389 ASP 390 SER 391 VAL 392 THR 393 SER 394 GLU 395 ILE 396 LYS 397 LEU 398 ALA 399 LYS 400 LEU 401 PRO 402 ASP 403 PHE 404 GLU 405 SER 406 ARG 407 TYR 408 VAL 409 GLN 410 ASN 411 GLY 412 THR 413 TYR 414 THR 415 VAL 416 LYS 417 ILE 418 VAL 419 ALA 420 ILE 421 SER 422 GLU 423 ASP 424 TYR 425 PRO 426 ARG 427 LYS 428 THR 429 ILE 430 THR 431 GLY 432 THR 433 VAL 434 LEU 435 ILE 436 ASN 437 VAL 438 GLU 439 ASP 440 ILE 441 ASN 442 ASP 443 ASN 444 CYS 445 PRO 446 THR 447 LEU 448 ILE 449 GLU 450 PRO 451 VAL 452 GLN 453 THR 454 ILE 455 CYS 456 HIS 457 ASP 458 ALA 459 GLU 460 TYR 461 VAL 462 ASN 463 VAL 464 THR 465 ALA 466 GLU 467 ASP 468 LEU 469 ASP 470 GLY 471 HIS 472 PRO 473 ASN 474 SER 475 GLY 476 PRO 477 PHE 478 SER 479 PHE 480 SER 481 VAL 482 ILE 483 ASP 484 LYS 485 PRO 486 PRO 487 GLY 488 MET 489 ALA 490 GLU 491 LYS 492 TRP 493 LYS 494 ILE 495 ALA 496 ARG 497 GLN 498 GLU 499 SER 500 THR 501 SER 502 VAL 503 LEU 504 LEU 505 GLN 506 GLN 507 SER 508 GLU 509 LYS 510 LYS 511 LEU 512 GLY 513 ARG 514 SER 515 GLU 516 ILE 517 GLN 518 PHE 519 LEU 520 ILE 521 SER 522 ASP 523 ASN 524 GLN 525 GLY 526 PHE 527 SER 528 CYS 529 PRO 530 GLU 531 LYS 532 GLN 533 VAL 534 LEU 535 THR 536 LEU 537 THR 538 VAL 539 CYS 540 GLU 541 CYS 542 LEU 543 HIS 544 GLY 545 SER 546 GLY 547 CYS 548 ARG 549 GLU 550 ALA 551 HIS 552

Ligands

Unit 2	NAG 1 NAG 2 BMA 3 MAN 4 NAG 5 GAL 6 MAN 7 NAG 8
Unit 3	NAG 1 NAG 2 BMA 3 MAN 4 MAN 5 FUC 6
Unit 4	NAG 1 NAG 2
Unit 5	MAN 609 MAN 610 MAN 611 NAG 620 NAG 621 CA 622 CA 623 CA 624 CA 625 CA 626 CA 627 CA 628 CA 629 CA 630 CA 631 CA 632 CL 633 CL 634