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Title | CRYSTAL STRUCTURE OF A CHIMERA OF HUMAN DESMOCOLLIN-2 EC1 AN DESMOGLEIN-2 EC2-EC5 | |
Keywords | EXTRACELLULAR CADHERIN DOMAIN, CELL ADHESION, DESMOSOME, CEL | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5J5J | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | DESMOCOLLIN-2,DESMOGLEIN-2 | A | 552 | 8608 | 0 |
2 | Ligand | B | 8 | 0 | 200 | |
3 | Ligand | C | 6 | 0 | 143 | |
4 | Ligand | D | 2 | 0 | 56 | |
5 | Ligand | DESMOCOLLIN-2,DESMOGLEIN-2 | A | 18 | 0 | 135 |
6 | Water | 9 | 0 | 9 | ||
total | 595 | 8608 | 543 |
Unit 1 | ARG1 TRP2 ALA3 PRO4 ILE5 PRO6 CYS7 SER8 MET9 LEU10 GLU11 ASN12 SER13 LEU14 GLY15 PRO16 PHE17 PRO18 LEU19 PHE20 LEU21 GLN22 GLN23 VAL24 GLN25 SER26 ASP27 THR28 ALA29 GLN30 ASN31 TYR32 THR33 ILE34 TYR35 TYR36 SER37 ILE38 ARG39 GLY40 PRO41 GLY42 VAL43 ASP44 GLN45 GLU46 PRO47 ARG48 ASN49 LEU50 PHE51 TYR52 VAL53 GLU54 ARG55 ASP56 THR57 GLY58 ASN59 LEU60 TYR61 CYS62 THR63 ARG64 PRO65 VAL66 ASP67 ARG68 GLU69 GLN70 TYR71 GLU72 SER73 PHE74 GLU75 ILE76 ILE77 ALA78 PHE79 ALA80 THR81 THR82 PRO83 ASP84 GLY85 TYR86 THR87 PRO88 GLU89 LEU90 PRO91 LEU92 PRO93 LEU94 ILE95 ILE96 LYS97 ILE98 GLU99 ASP100 ILE101 ASN102 ASP103 ASN104 GLU105 PRO106 VAL107 PHE108 THR109 GLN110 ASP111 VAL112 PHE113 VAL114 GLY115 SER116 VAL117 GLU118 GLU119 LEU120 SER121 ALA122 ALA123 HIS124 THR125 LEU126 VAL127 MET128 LYS129 ILE130 ASN131 ALA132 THR133 ASP134 ALA135 ASP136 GLU137 PRO138 ASN139 THR140 LEU141 ASN142 SER143 LYS144 ILE145 SER146 TYR147 ARG148 ILE149 VAL150 SER151 LEU152 GLU153 PRO154 ALA155 TYR156 PRO157 PRO158 VAL159 PHE160 TYR161 LEU162 ASN163 LYS164 ASP165 THR166 GLY167 GLU168 ILE169 TYR170 THR171 THR172 SER173 VAL174 THR175 LEU176 ASP177 ARG178 GLU179 GLU180 HIS181 SER182 SER183 TYR184 THR185 LEU186 THR187 VAL188 GLU189 ALA190 ARG191 ASP192 GLY193 ASN194 GLY195 GLU196 VAL197 THR198 ASP199 LYS200 PRO201 VAL202 LYS203 GLN204 ALA205 GLN206 VAL207 GLN208 ILE209 ARG210 ILE211 LEU212 ASP213 VAL214 ASN215 ASP216 ASN217 ILE218 PRO219 VAL220 VAL221 GLU222 ASN223 LYS224 VAL225 LEU226 GLU227 GLY228 MET229 VAL230 GLU231 GLU232 ASN233 GLN234 VAL235 ASN236 VAL237 GLU238 VAL239 THR240 ARG241 ILE242 LYS243 VAL244 PHE245 ASP246 ALA247 ASP248 GLU249 ILE250 GLY251 SER252 ASP253 ASN254 TRP255 LEU256 ALA257 ASN258 PHE259 THR260 PHE261 ALA262 SER263 GLY264 ASN265 GLU266 GLY267 GLY268 TYR269 PHE270 HIS271 ILE272 GLU273 THR274 ASP275 ALA276 GLN277 THR278 ASN279 GLU280 GLY281 ILE282 VAL283 THR284 LEU285 ILE286 LYS287 GLU288 VAL289 ASP290 TYR291 GLU292 GLU293 MET294 LYS295 ASN296 LEU297 ASP298 PHE299 SER300 VAL301 ILE302 VAL303 ALA304 ASN305 LYS306 ALA307 ALA308 PHE309 HIS310 LYS311 SER312 ILE313 ARG314 SER315 LYS316 TYR317 LYS318 PRO319 THR320 PRO321 ILE322 PRO323 ILE324 LYS325 VAL326 LYS327 VAL328 LYS329 ASN330 VAL331 LYS332 GLU333 GLY334 ILE335 HIS336 PHE337 LYS338 SER339 SER340 VAL341 ILE342 SER343 ILE344 TYR345 VAL346 SER347 GLU348 SER349 MET350 ASP351 ARG352 SER353 SER354 LYS355 GLY356 GLN357 ILE358 ILE359 GLY360 ASN361 PHE362 GLN363 ALA364 PHE365 ASP366 GLU367 ASP368 THR369 GLY370 LEU371 PRO372 ALA373 HIS374 ALA375 ARG376 TYR377 VAL378 LYS379 LEU380 GLU381 ASP382 ARG383 ASP384 ASN385 TRP386 ILE387 SER388 VAL389 ASP390 SER391 VAL392 THR393 SER394 GLU395 ILE396 LYS397 LEU398 ALA399 LYS400 LEU401 PRO402 ASP403 PHE404 GLU405 SER406 ARG407 TYR408 VAL409 GLN410 ASN411 GLY412 THR413 TYR414 THR415 VAL416 LYS417 ILE418 VAL419 ALA420 ILE421 SER422 GLU423 ASP424 TYR425 PRO426 ARG427 LYS428 THR429 ILE430 THR431 GLY432 THR433 VAL434 LEU435 ILE436 ASN437 VAL438 GLU439 ASP440 ILE441 ASN442 ASP443 ASN444 CYS445 PRO446 THR447 LEU448 ILE449 GLU450 PRO451 VAL452 GLN453 THR454 ILE455 CYS456 HIS457 ASP458 ALA459 GLU460 TYR461 VAL462 ASN463 VAL464 THR465 ALA466 GLU467 ASP468 LEU469 ASP470 GLY471 HIS472 PRO473 ASN474 SER475 GLY476 PRO477 PHE478 SER479 PHE480 SER481 VAL482 ILE483 ASP484 LYS485 PRO486 PRO487 GLY488 MET489 ALA490 GLU491 LYS492 TRP493 LYS494 ILE495 ALA496 ARG497 GLN498 GLU499 SER500 THR501 SER502 VAL503 LEU504 LEU505 GLN506 GLN507 SER508 GLU509 LYS510 LYS511 LEU512 GLY513 ARG514 SER515 GLU516 ILE517 GLN518 PHE519 LEU520 ILE521 SER522 ASP523 ASN524 GLN525 GLY526 PHE527 SER528 CYS529 PRO530 GLU531 LYS532 GLN533 VAL534 LEU535 THR536 LEU537 THR538 VAL539 CYS540 GLU541 CYS542 LEU543 HIS544 GLY545 SER546 GLY547 CYS548 ARG549 GLU550 ALA551 HIS552 |
Unit 2 | NAG1 NAG2 BMA3 MAN4 NAG5 GAL6 MAN7 NAG8 |
Unit 3 | NAG1 NAG2 BMA3 MAN4 MAN5 FUC6 |
Unit 4 | NAG1 NAG2 |
Unit 5 | MAN609 MAN610 MAN611 NAG620 NAG621 CA622 CA623 CA624 CA625 CA626 CA627 CA628 CA629 CA630 CA631 CA632 CL633 CL634 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |