5J42 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF M2HTDP2-CAT IN COMPLEX WITH A SMALL MOL INHIBITOR
• Keywords: TYROSYL DNA PHOSPHODIESTERASE 2 CATALYTIC DOMAIN, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5J42	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TYROSYL-DNA PHOSPHODIESTERASE 2	A	248	1940	0
2	Protein	TYROSYL-DNA PHOSPHODIESTERASE 2	B	249	1943	0
3	Ligand	TYROSYL-DNA PHOSPHODIESTERASE 2	A	6	0	56
4	Ligand	TYROSYL-DNA PHOSPHODIESTERASE 2	B	8	0	76
5	Water			693	0	693
total				1204	3883	825

Proteins

Unit 1

THR 123 ILE 124 SER 125 PHE 126 ILE 127 THR 128 TRP 129 ASN 130 ILE 131 ASP 132 GLY 133 LEU 134 ASP 135 GLY 136 CYS 137 ASN 138 LEU 139 PRO 140 GLU 141 ARG 142 ALA 143 ARG 144 GLY 145 VAL 146 CYS 147 SER 148 CYS 149 LEU 150 ALA 151 LEU 152 TYR 153 SER 154 PRO 155 ASP 156 VAL 157 VAL 158 PHE 159 LEU 160 GLN 161 GLU 162 VAL 163 ILE 164 PRO 165 PRO 166 TYR 167 CYS 168 ALA 169 TYR 170 LEU 171 LYS 172 LYS 173 ARG 174 ALA 175 ALA 176 SER 177 TYR 178 THR 179 ILE 180 ILE 181 THR 182 GLY 183 ASN 184 GLU 185 GLU 186 GLY 187 TYR 188 PHE 189 THR 190 ALA 191 ILE 192 LEU 193 LEU 194 LYS 195 LYS 196 GLY 197 ARG 198 VAL 199 LYS 200 PHE 201 LYS 202 SER 203 GLN 204 GLU 205 ILE 206 ILE 207 PRO 208 PHE 209 PRO 210 ASN 211 THR 212 LYS 213 MET 214 MET 215 ARG 216 ASN 217 LEU 218 LEU 219 CYS 220 VAL 221 ASN 222 VAL 223 SER 224 LEU 225 GLY 226 GLY 227 ASN 228 GLU 229 PHE 230 CYS 231 LEU 232 MET 233 THR 234 SER 235 HIS 236 LEU 237 GLU 238 SER 239 THR 240 ARG 241 GLY 242 HIS 243 SER 244 ALA 245 GLU 246 ARG 247 ILE 248 ARG 249 GLN 250 LEU 251 LYS 252 THR 253 VAL 254 LEU 255 GLY 256 LYS 257 MET 258 GLN 259 GLU 260 ALA 261 PRO 262 ASP 263 SER 264 THR 265 THR 266 VAL 267 ILE 268 PHE 269 ALA 270 GLY 271 ASP 272 THR 273 ASN 274 LEU 275 ARG 276 ASP 277 ARG 278 GLU 279 VAL 280 ILE 281 LYS 282 CYS 283 GLY 284 GLY 285 LEU 286 PRO 287 ASP 288 ASN 289 VAL 290 PHE 291 ASP 292 ALA 293 TRP 294 GLU 295 PHE 296 LEU 297 GLY 298 LYS 299 PRO 300 LYS 301 HIS 302 CYS 303 GLN 304 TYR 305 THR 306 TRP 307 ASP 308 THR 309 LYS 310 ALA 311 ASN 312 ASN 313 ASN 314 LEU 315 ARG 316 ILE 317 PRO 318 ALA 319 ALA 320 CYS 321 LYS 322 LEU 323 ARG 324 PHE 325 ASP 326 ARG 327 ILE 328 PHE 329 PHE 330 ARG 331 ALA 332 GLU 333 GLU 334 GLY 335 HIS 336 LEU 337 ILE 338 PRO 339 GLN 340 SER 341 LEU 342 ASP 343 LEU 344 VAL 345 GLY 346 LEU 347 GLU 348 LYS 349 LEU 350 ASP 351 CYS 352 GLY 353 ARG 354 PHE 355 PRO 356 SER 357 ASP 358 HIS 359 TRP 360 GLY 361 LEU 362 LEU 363 CYS 364 THR 365 LEU 366 ASN 367 VAL 368 VAL 369 LEU 370

Unit 2

SER 122 THR 123 ILE 124 SER 125 PHE 126 ILE 127 THR 128 TRP 129 ASN 130 ILE 131 ASP 132 GLY 133 LEU 134 ASP 135 GLY 136 CYS 137 ASN 138 LEU 139 PRO 140 GLU 141 ARG 142 ALA 143 ARG 144 GLY 145 VAL 146 CYS 147 SER 148 CYS 149 LEU 150 ALA 151 LEU 152 TYR 153 SER 154 PRO 155 ASP 156 VAL 157 VAL 158 PHE 159 LEU 160 GLN 161 GLU 162 VAL 163 ILE 164 PRO 165 PRO 166 TYR 167 CYS 168 ALA 169 TYR 170 LEU 171 LYS 172 LYS 173 ARG 174 ALA 175 ALA 176 SER 177 TYR 178 THR 179 ILE 180 ILE 181 THR 182 GLY 183 ASN 184 GLU 185 GLU 186 GLY 187 TYR 188 PHE 189 THR 190 ALA 191 ILE 192 LEU 193 LEU 194 LYS 195 LYS 196 GLY 197 ARG 198 VAL 199 LYS 200 PHE 201 LYS 202 SER 203 GLN 204 GLU 205 ILE 206 ILE 207 PRO 208 PHE 209 PRO 210 ASN 211 THR 212 LYS 213 MET 214 MET 215 ARG 216 ASN 217 LEU 218 LEU 219 CYS 220 VAL 221 ASN 222 VAL 223 SER 224 LEU 225 GLY 226 GLY 227 ASN 228 GLU 229 PHE 230 CYS 231 LEU 232 MET 233 THR 234 SER 235 HIS 236 LEU 237 GLU 238 SER 239 THR 240 ARG 241 GLY 242 HIS 243 SER 244 ALA 245 GLU 246 ARG 247 ILE 248 ARG 249 GLN 250 LEU 251 LYS 252 THR 253 VAL 254 LEU 255 GLY 256 LYS 257 MET 258 GLN 259 GLU 260 ALA 261 PRO 262 ASP 263 SER 264 THR 265 THR 266 VAL 267 ILE 268 PHE 269 ALA 270 GLY 271 ASP 272 THR 273 ASN 274 LEU 275 ARG 276 ASP 277 ARG 278 GLU 279 VAL 280 ILE 281 LYS 282 CYS 283 GLY 284 GLY 285 LEU 286 PRO 287 ASP 288 ASN 289 VAL 290 PHE 291 ASP 292 ALA 293 TRP 294 GLU 295 PHE 296 LEU 297 GLY 298 LYS 299 PRO 300 LYS 301 HIS 302 CYS 303 GLN 304 TYR 305 THR 306 TRP 307 ASP 308 THR 309 LYS 310 ALA 311 ASN 312 ASN 313 ASN 314 LEU 315 ARG 316 ILE 317 PRO 318 ALA 319 ALA 320 CYS 321 LYS 322 LEU 323 ARG 324 PHE 325 ASP 326 ARG 327 ILE 328 PHE 329 PHE 330 ARG 331 ALA 332 GLU 333 GLU 334 GLY 335 HIS 336 LEU 337 ILE 338 PRO 339 GLN 340 SER 341 LEU 342 ASP 343 LEU 344 VAL 345 GLY 346 LEU 347 GLU 348 LYS 349 LEU 350 ASP 351 CYS 352 GLY 353 ARG 354 PHE 355 PRO 356 SER 357 ASP 358 HIS 359 TRP 360 GLY 361 LEU 362 LEU 363 CYS 364 THR 365 LEU 366 ASN 367 VAL 368 VAL 369 LEU 370

Ligands

Unit 3	6FV 401 TLA 402 TLA 403 GOL 404 EDO 405 MN 406
Unit 4	6FV 401 TLA 402 TLA 403 TLA 404 TLA 405 GOL 406 EDO 407 MN 408