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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF HUMAN EEFSEC IN COMPLEX WITH GDPNP
Keywords ELONGATION FACTOR, SELENOCYSTEINE, SELENOCYSTEINE TRNA, TRAN GTPASE, GDPNP, GTP
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5IZM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  A 460 3028 112
2  Protein   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  B 495 3299 120
3  Ligand   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  A 2 0 33
4  Ligand   SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR  B 2 0 33
total       959 6327 298
Proteins
Unit 1 GLY3 ARG4 ARG5 VAL6 ASN7 VAL8 ASN9 VAL10 GLY11 VAL12 LEU13 GLY14 HIS15 ILE16 ASP17 SER18 GLY19 LYS20 THR21 ALA22 LEU23 ALA24 ARG25 ALA26 LEU27 SER28 THR29 THR30 ALA31 ILE47 THR48 LEU49 ASP50 LEU51 GLY52 PHE53 SER54 CYS55 PHE56 SER57 VAL58 PRO59 LEU60 PRO61 ALA62 ARG63 LEU64 ARG65 SER66 SER67 PRO84 LEU85 LEU86 GLN87 VAL88 THR89 LEU90 VAL91 ASP92 CYS93 PRO94 GLY95 HIS96 ALA97 SER98 LEU99 ILE100 ARG101 THR102 ILE103 ILE104 GLY105 GLY106 ALA107 GLN108 ILE109 ILE110 ASP111 LEU112 MSE113 MSE114 LEU115 VAL116 ILE117 ASP118 VAL119 THR120 LYS121 GLY122 MSE123 GLN124 THR125 GLN126 SER127 ALA128 GLU129 CYS130 LEU131 VAL132 ILE133 GLY134 GLN135 ILE136 ALA137 CYS138 GLN139 LYS140 LEU141 VAL142 VAL143 VAL144 LEU145 ASN146 LYS147 ILE148 ASP149 LEU150 LEU151 PRO152 GLU153 GLY154 LYS155 ARG156 GLN157 ALA158 ALA159 ILE160 ASP161 LYS162 MSE163 THR164 LYS165 LYS166 MSE167 GLN168 LYS169 THR170 LEU171 GLU172 ASN173 THR174 LYS175 PHE176 ARG177 GLY178 ALA179 PRO180 ILE181 ILE182 PRO183 VAL184 ALA185 ALA186 LYS187 PRO188 GLY189 GLY190 ALA198 PRO199 GLN200 GLY201 ILE202 PRO203 GLU204 LEU205 ILE206 GLU207 LEU208 LEU209 THR210 SER211 GLN212 ILE213 SER214 ILE215 PRO216 THR217 ARG218 ASP219 PRO220 SER221 GLY222 PRO223 PHE224 LEU225 MSE226 SER227 VAL228 ASP229 HIS230 CYS231 PHE232 SER233 ILE234 GLY238 THR239 VAL240 MSE241 THR242 GLY243 THR244 ILE245 LEU246 SER247 GLY248 SER249 ILE250 SER251 LEU252 GLY253 ASP254 SER255 VAL256 GLU257 ILE258 PRO259 ALA260 LEU261 LYS262 VAL263 VAL264 LYS265 LYS266 VAL267 LYS268 SER269 MSE270 GLN271 MSE272 PHE273 HIS274 MSE275 PRO276 ILE277 THR278 SER279 ALA280 MSE281 GLN282 GLY283 ASP284 ARG285 LEU286 GLY287 ILE288 CYS289 VAL290 THR291 GLN292 PHE293 ASP294 PRO295 LYS296 LEU297 LEU298 GLU299 ARG300 GLY301 LEU302 VAL303 CYS304 ALA305 PRO306 GLU307 SER308 LEU309 HIS310 THR311 VAL312 HIS313 ALA314 ALA315 LEU316 ILE317 SER318 VAL319 GLU320 LYS321 ILE322 PRO323 TYR324 PHE325 ARG326 GLY327 PRO328 LEU329 GLN330 THR331 LYS332 ALA333 LYS334 PHE335 HIS336 ILE337 THR338 VAL339 GLY340 HIS341 GLU342 THR343 VAL344 MSE345 GLY346 ARG347 LEU348 MSE349 PHE350 PHE351 SER352 PRO353 ALA354 PRO355 ASP356 ASN357 PHE358 ASP359 GLN360 GLU361 PRO362 ILE363 LEU364 ASP365 SER366 PHE367 ASN368 PHE369 SER370 GLN371 GLU372 TYR373 LEU374 PHE375 GLN376 GLU377 GLN378 TYR379 LEU380 SER381 PRO407 ARG408 GLN409 GLN410 TRP411 ALA412 LEU413 VAL414 GLU415 PHE416 GLU417 LYS418 PRO419 VAL420 THR421 CYS422 PRO423 ARG424 LEU425 CYS426 LEU427 VAL428 ILE429 GLY430 SER431 ARG432 LEU433 ASP434 ALA435 ASP436 ILE437 HIS438 THR439 ASN440 THR441 CYS442 ARG443 LEU444 ALA445 PHE446 HIS447 GLY448 ILE449 LEU450 LEU451 HIS452 GLY453 LEU454 GLU455 ASP456 ARG457 ASN458 TYR459 ALA460 ASP461 SER462 PHE463 LEU464 PRO465 ARG466 LEU467 LYS468 VAL469 TYR470 LYS471 LEU472 LYS473 HIS474 LYS475 ASP484 ASP485 TYR486 SER487 VAL488 GLN501 LEU502 PHE503 VAL504 GLY505 LEU506 LYS507 VAL508 HIS509 LEU510 SER511 THR512 GLY513 GLU514 LEU515 GLY516 ILE517 ILE518 ASP519 SER520 PHE528 LYS529 ILE530 HIS531 ILE532 PRO533 GLY534 GLY535 LEU536 LEU577 SER578 LEU579 THR580 PHE581 LYS582 ARG583 TYR584 VAL585 PHE586 ASP587 THR588 HIS589 LYS590 ARG591 MSE592 VAL593 GLN594 SER595
Unit 2 ARG4 ARG5 VAL6 ASN7 VAL8 ASN9 VAL10 GLY11 VAL12 LEU13 GLY14 HIS15 ILE16 ASP17 SER18 GLY19 LYS20 THR21 ALA22 LEU23 ALA24 ARG25 ALA26 LEU27 SER28 THR29 THR30 ALA31 GLY46 ILE47 THR48 LEU49 ASP50 LEU51 GLY52 PHE53 SER54 CYS55 PHE56 SER57 VAL58 PRO59 LEU60 PRO61 ALA62 ARG63 LEU64 ARG65 SER66 SER67 LEU68 GLU83 PRO84 LEU85 LEU86 GLN87 VAL88 THR89 LEU90 VAL91 ASP92 CYS93 PRO94 GLY95 HIS96 ALA97 SER98 LEU99 ILE100 ARG101 THR102 ILE103 ILE104 GLY105 GLY106 ALA107 GLN108 ILE109 ILE110 ASP111 LEU112 MSE113 MSE114 LEU115 VAL116 ILE117 ASP118 VAL119 THR120 LYS121 GLY122 MSE123 GLN124 THR125 GLN126 SER127 ALA128 GLU129 CYS130 LEU131 VAL132 ILE133 GLY134 GLN135 ILE136 ALA137 CYS138 GLN139 LYS140 LEU141 VAL142 VAL143 VAL144 LEU145 ASN146 LYS147 ILE148 ASP149 LEU150 LEU151 PRO152 GLU153 ARG156 GLN157 ALA158 ALA159 ILE160 ASP161 LYS162 MSE163 THR164 LYS165 LYS166 MSE167 GLN168 LYS169 THR170 LEU171 GLU172 ASN173 THR174 LYS175 PHE176 ARG177 GLY178 ALA179 PRO180 ILE181 ILE182 PRO183 VAL184 ALA185 ALA186 LYS187 PRO188 GLY189 GLY190 PRO199 GLN200 GLY201 ILE202 PRO203 GLU204 LEU205 ILE206 GLU207 LEU208 LEU209 THR210 SER211 GLN212 ILE213 SER214 ILE215 PRO216 THR217 ARG218 ASP219 PRO220 SER221 GLY222 PRO223 PHE224 LEU225 MSE226 SER227 VAL228 ASP229 HIS230 CYS231 PHE232 SER233 ILE234 LYS235 GLY236 GLN237 GLY238 THR239 VAL240 MSE241 THR242 GLY243 THR244 ILE245 LEU246 SER247 GLY248 SER249 ILE250 SER251 LEU252 GLY253 ASP254 SER255 VAL256 GLU257 ILE258 PRO259 ALA260 LEU261 LYS262 VAL263 VAL264 LYS265 LYS266 VAL267 LYS268 SER269 MSE270 GLN271 MSE272 PHE273 HIS274 MSE275 PRO276 ILE277 THR278 SER279 ALA280 MSE281 GLN282 GLY283 ASP284 ARG285 LEU286 GLY287 ILE288 CYS289 VAL290 THR291 GLN292 PHE293 ASP294 PRO295 LYS296 LEU297 LEU298 GLU299 ARG300 GLY301 LEU302 VAL303 CYS304 ALA305 PRO306 GLU307 SER308 LEU309 HIS310 THR311 VAL312 HIS313 ALA314 ALA315 LEU316 ILE317 SER318 VAL319 GLU320 LYS321 ILE322 PRO323 TYR324 PHE325 ARG326 GLY327 PRO328 LEU329 GLN330 THR331 LYS332 ALA333 LYS334 PHE335 HIS336 ILE337 THR338 VAL339 GLY340 HIS341 GLU342 THR343 VAL344 MSE345 GLY346 ARG347 LEU348 MSE349 PHE350 PHE351 SER352 PRO353 ALA354 PRO355 ASP356 ASN357 PHE358 ASP359 GLN360 GLU361 PRO362 ILE363 LEU364 ASP365 SER366 PHE367 ASN368 PHE369 SER370 GLN371 GLU372 TYR373 LEU374 PHE375 GLN376 GLU377 GLN378 TYR379 LEU380 SER381 PRO407 ARG408 GLN409 GLN410 TRP411 ALA412 LEU413 VAL414 GLU415 PHE416 GLU417 LYS418 PRO419 VAL420 THR421 CYS422 PRO423 ARG424 LEU425 CYS426 LEU427 VAL428 ILE429 GLY430 SER431 ARG432 LEU433 ASP434 ALA435 HIS438 THR439 ASN440 THR441 CYS442 ARG443 LEU444 ALA445 PHE446 HIS447 GLY448 ILE449 LEU450 LEU451 HIS452 GLY453 LEU454 GLU455 ASP456 ARG457 ASN458 TYR459 ALA460 ASP461 SER462 PHE463 LEU464 PRO465 ARG466 LEU467 LYS468 VAL469 TYR470 LYS471 LEU472 LYS473 HIS474 LYS475 HIS476 GLY477 LEU478 VAL479 GLU480 ARG481 ALA482 MSE483 ASP484 ASP485 TYR486 SER487 VAL488 ILE489 GLY490 ARG491 SER492 LEU493 PHE494 GLU497 THR498 ASN499 ILE500 GLN501 LEU502 PHE503 VAL504 GLY505 LEU506 LYS507 VAL508 HIS509 LEU510 SER511 THR512 GLY513 GLU514 LEU515 GLY516 ILE517 ILE518 ASP519 SER520 ALA521 PHE522 GLY523 LYS527 PHE528 LYS529 ILE530 HIS531 ILE532 PRO533 GLY534 GLY535 LEU536 SER537 PRO538 GLU539 SER540 LYS541 LYS542 ILE543 LEU544 SER572 GLN573 HIS574 VAL575 VAL576 LEU577 SER578 LEU579 THR580 PHE581 LYS582 ARG583 TYR584 VAL585 PHE586 ASP587 THR588 HIS589 LYS590 ARG591 MSE592 VAL593 GLN594 SER595
Ligands
Unit 3 MN1001 GNP1002
Unit 4 MN1001 GNP1002
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany