5ITP - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE PERIPLASMIC BINDING PROTEIN NOCT FROM A.TUM IN COMPLEX WITH OCTOPINE
• Keywords: PERIPLASMIC BINDING PROTEIN, OPINE, MEMBRANE PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5ITP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NOPALINE-BINDING PERIPLASMIC PROTEIN	A	254	1949	0
2	Protein	NOPALINE-BINDING PERIPLASMIC PROTEIN	B	254	1949	0
3	Ligand	NOPALINE-BINDING PERIPLASMIC PROTEIN	A	9	0	52
4	Ligand	NOPALINE-BINDING PERIPLASMIC PROTEIN	B	1	0	17
5	Water			257	0	257
total				775	3898	326

Proteins

Unit 1

TYR 28 LYS 29 SER 30 ILE 31 THR 32 ILE 33 ALA 34 THR 35 GLU 36 GLY 37 SER 38 TYR 39 ALA 40 PRO 41 TYR 42 ASN 43 PHE 44 LYS 45 ASP 46 ALA 47 GLY 48 GLY 49 LYS 50 LEU 51 ILE 52 GLY 53 PHE 54 ASP 55 ILE 56 ASP 57 LEU 58 GLY 59 ASN 60 ASP 61 LEU 62 CYS 63 LYS 64 ARG 65 MET 66 ASN 67 ILE 68 GLU 69 CYS 70 LYS 71 PHE 72 VAL 73 GLU 74 GLN 75 ALA 76 TRP 77 ASP 78 GLY 79 ILE 80 ILE 81 PRO 82 SER 83 LEU 84 THR 85 ALA 86 GLY 87 ARG 88 TYR 89 ASP 90 ALA 91 ILE 92 MET 93 ALA 94 ALA 95 MET 96 GLY 97 ILE 98 GLN 99 PRO 100 ALA 101 ARG 102 GLU 103 LYS 104 VAL 105 ILE 106 ALA 107 PHE 108 SER 109 ARG 110 PRO 111 TYR 112 LEU 113 LEU 114 THR 115 PRO 116 MET 117 THR 118 PHE 119 LEU 120 THR 121 THR 122 ALA 123 ASP 124 SER 125 PRO 126 LEU 127 LEU 128 LYS 129 THR 130 GLN 131 VAL 132 ALA 133 ILE 134 GLU 135 ASN 136 LEU 137 PRO 138 LEU 139 ASP 140 ASN 141 ILE 142 THR 143 PRO 144 GLU 145 GLN 146 LYS 147 ALA 148 GLU 149 LEU 150 ASP 151 LYS 152 PHE 153 THR 154 LYS 155 ILE 156 PHE 157 GLU 158 GLY 159 VAL 160 LYS 161 PHE 162 GLY 163 VAL 164 GLN 165 ALA 166 GLY 167 THR 168 SER 169 HIS 170 GLU 171 ALA 172 PHE 173 MET 174 LYS 175 GLN 176 MET 177 MET 178 PRO 179 SER 180 VAL 181 GLN 182 ILE 183 SER 184 THR 185 TYR 186 ASP 187 THR 188 ILE 189 ASP 190 ASN 191 VAL 192 VAL 193 MET 194 ASP 195 LEU 196 LYS 197 ALA 198 GLY 199 ARG 200 ILE 201 ASP 202 ALA 203 SER 204 LEU 205 ALA 206 SER 207 VAL 208 SER 209 PHE 210 LEU 211 LYS 212 PRO 213 LEU 214 THR 215 ASP 216 LYS 217 PRO 218 ASP 219 ASN 220 LYS 221 ASP 222 LEU 223 LYS 224 MET 225 PHE 226 GLY 227 PRO 228 ARG 229 MET 230 THR 231 GLY 232 GLY 233 LEU 234 PHE 235 GLY 236 LYS 237 GLY 238 VAL 239 GLY 240 VAL 241 GLY 242 ILE 243 ARG 244 LYS 245 GLU 246 ASP 247 ALA 248 ASP 249 LEU 250 LYS 251 ALA 252 LEU 253 PHE 254 ASP 255 LYS 256 ALA 257 ILE 258 ASP 259 ALA 260 ALA 261 ILE 262 ALA 263 ASP 264 GLY 265 THR 266 VAL 267 GLN 268 LYS 269 LEU 270 SER 271 GLN 272 GLN 273 TRP 274 PHE 275 GLY 276 TYR 277 ASP 278 ALA 279 SER 280 PRO 281

Unit 2

TYR 28 LYS 29 SER 30 ILE 31 THR 32 ILE 33 ALA 34 THR 35 GLU 36 GLY 37 SER 38 TYR 39 ALA 40 PRO 41 TYR 42 ASN 43 PHE 44 LYS 45 ASP 46 ALA 47 GLY 48 GLY 49 LYS 50 LEU 51 ILE 52 GLY 53 PHE 54 ASP 55 ILE 56 ASP 57 LEU 58 GLY 59 ASN 60 ASP 61 LEU 62 CYS 63 LYS 64 ARG 65 MET 66 ASN 67 ILE 68 GLU 69 CYS 70 LYS 71 PHE 72 VAL 73 GLU 74 GLN 75 ALA 76 TRP 77 ASP 78 GLY 79 ILE 80 ILE 81 PRO 82 SER 83 LEU 84 THR 85 ALA 86 GLY 87 ARG 88 TYR 89 ASP 90 ALA 91 ILE 92 MET 93 ALA 94 ALA 95 MET 96 GLY 97 ILE 98 GLN 99 PRO 100 ALA 101 ARG 102 GLU 103 LYS 104 VAL 105 ILE 106 ALA 107 PHE 108 SER 109 ARG 110 PRO 111 TYR 112 LEU 113 LEU 114 THR 115 PRO 116 MET 117 THR 118 PHE 119 LEU 120 THR 121 THR 122 ALA 123 ASP 124 SER 125 PRO 126 LEU 127 LEU 128 LYS 129 THR 130 GLN 131 VAL 132 ALA 133 ILE 134 GLU 135 ASN 136 LEU 137 PRO 138 LEU 139 ASP 140 ASN 141 ILE 142 THR 143 PRO 144 GLU 145 GLN 146 LYS 147 ALA 148 GLU 149 LEU 150 ASP 151 LYS 152 PHE 153 THR 154 LYS 155 ILE 156 PHE 157 GLU 158 GLY 159 VAL 160 LYS 161 PHE 162 GLY 163 VAL 164 GLN 165 ALA 166 GLY 167 THR 168 SER 169 HIS 170 GLU 171 ALA 172 PHE 173 MET 174 LYS 175 GLN 176 MET 177 MET 178 PRO 179 SER 180 VAL 181 GLN 182 ILE 183 SER 184 THR 185 TYR 186 ASP 187 THR 188 ILE 189 ASP 190 ASN 191 VAL 192 VAL 193 MET 194 ASP 195 LEU 196 LYS 197 ALA 198 GLY 199 ARG 200 ILE 201 ASP 202 ALA 203 SER 204 LEU 205 ALA 206 SER 207 VAL 208 SER 209 PHE 210 LEU 211 LYS 212 PRO 213 LEU 214 THR 215 ASP 216 LYS 217 PRO 218 ASP 219 ASN 220 LYS 221 ASP 222 LEU 223 LYS 224 MET 225 PHE 226 GLY 227 PRO 228 ARG 229 MET 230 THR 231 GLY 232 GLY 233 LEU 234 PHE 235 GLY 236 LYS 237 GLY 238 VAL 239 GLY 240 VAL 241 GLY 242 ILE 243 ARG 244 LYS 245 GLU 246 ASP 247 ALA 248 ASP 249 LEU 250 LYS 251 ALA 252 LEU 253 PHE 254 ASP 255 LYS 256 ALA 257 ILE 258 ASP 259 ALA 260 ALA 261 ILE 262 ALA 263 ASP 264 GLY 265 THR 266 VAL 267 GLN 268 LYS 269 LEU 270 SER 271 GLN 272 GLN 273 TRP 274 PHE 275 GLY 276 TYR 277 ASP 278 ALA 279 SER 280 PRO 281

Ligands

Unit 3	6DB 301 EDO 302 EDO 303 EDO 304 EDO 305 EDO 306 EDO 307 EDO 308 PEG 309
Unit 4	6DB 301