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Sequence, Chains, Asymmetric and Biological Units

Title SIGMAS-TRANSCRIPTION INITIATION COMPLEX WITH 4-NT NASCENT RN
Keywords TRANSCRIPTION INITIATION, RNA POLYMERASE, GENERAL STRESS SIG FACTOR, PYROPHOSPHATE RELEASE, TRANSCRIPTION, TRANSFERASE-D COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5IPM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA  A 230 1787 0
2  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA  B 228 1767 0
3  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA  C 1340 10570 0
4  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'  D 1362 10568 0
5  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT OMEGA  E 79 627 0
6  Protein   RNA POLYMERASE SIGMA FACTOR RPOS  F 277 2253 0
7  Other macromolecule   SYNTHETIC NON-TEMPLATE STRAND DNA (50-MER)  1 33 680 0
8  Other macromolecule   SYNTHETIC TEMPLATE STRAND DNA (50-MER)  2 33 675 0
9  RNA    3 4 65 32
10  Ligand   DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'  D 3 0 3
total       3589 28992 35
Proteins
Unit 1 THR6 GLU7 PHE8 LEU9 LYS10 PRO11 ARG12 LEU13 VAL14 ASP15 ILE16 GLU17 GLN18 VAL19 SER20 SER21 THR22 HIS23 ALA24 LYS25 VAL26 THR27 LEU28 GLU29 PRO30 LEU31 GLU32 ARG33 GLY34 PHE35 GLY36 HIS37 THR38 LEU39 GLY40 ASN41 ALA42 LEU43 ARG44 ARG45 ILE46 LEU47 LEU48 SER49 SER50 MET51 PRO52 GLY53 CYS54 ALA55 VAL56 THR57 GLU58 VAL59 GLU60 ILE61 ASP62 GLY63 VAL64 LEU65 HIS66 GLU67 TYR68 SER69 THR70 LYS71 GLU72 GLY73 VAL74 GLN75 GLU76 ASP77 ILE78 LEU79 GLU80 ILE81 LEU82 LEU83 ASN84 LEU85 LYS86 GLY87 LEU88 ALA89 VAL90 ARG91 VAL92 GLN93 GLY94 LYS95 ASP96 GLU97 VAL98 ILE99 LEU100 THR101 LEU102 ASN103 LYS104 SER105 GLY106 ILE107 GLY108 PRO109 VAL110 THR111 ALA112 ALA113 ASP114 ILE115 THR116 HIS117 ASP118 GLY119 ASP120 VAL121 GLU122 ILE123 VAL124 LYS125 PRO126 GLN127 HIS128 VAL129 ILE130 CYS131 HIS132 LEU133 THR134 ASP135 GLU136 ASN137 ALA138 SER139 ILE140 SER141 MET142 ARG143 ILE144 LYS145 VAL146 GLN147 ARG148 GLY149 ARG150 GLY151 TYR152 VAL153 PRO154 ALA155 SER156 THR157 ARG158 ILE159 HIS160 SER161 GLU162 GLU163 ASP164 GLU165 ARG166 PRO167 ILE168 GLY169 ARG170 LEU171 LEU172 VAL173 ASP174 ALA175 CYS176 TYR177 SER178 PRO179 VAL180 GLU181 ARG182 ILE183 ALA184 TYR185 ASN186 VAL187 GLU188 ALA189 ALA190 ARG191 VAL192 GLU193 GLN194 ARG195 THR196 ASP197 LEU198 ASP199 LYS200 LEU201 VAL202 ILE203 GLU204 MET205 GLU206 THR207 ASN208 GLY209 THR210 ILE211 ASP212 PRO213 GLU214 GLU215 ALA216 ILE217 ARG218 ARG219 ALA220 ALA221 THR222 ILE223 LEU224 ALA225 GLU226 GLN227 LEU228 GLU229 ALA230 PHE231 VAL232 ASP233 LEU234 ARG235
Unit 2 THR6 GLU7 PHE8 LEU9 LYS10 PRO11 ARG12 LEU13 VAL14 ASP15 ILE16 GLU17 GLN18 VAL19 SER20 SER21 THR22 HIS23 ALA24 LYS25 VAL26 THR27 LEU28 GLU29 PRO30 LEU31 GLU32 ARG33 GLY34 PHE35 GLY36 HIS37 THR38 LEU39 GLY40 ASN41 ALA42 LEU43 ARG44 ARG45 ILE46 LEU47 LEU48 SER49 SER50 MET51 PRO52 GLY53 CYS54 ALA55 VAL56 THR57 GLU58 VAL59 GLU60 ILE61 ASP62 GLY63 VAL64 LEU65 HIS66 GLU67 TYR68 SER69 THR70 LYS71 GLU72 GLY73 VAL74 GLN75 GLU76 ASP77 ILE78 LEU79 GLU80 ILE81 LEU82 LEU83 ASN84 LEU85 LYS86 GLY87 LEU88 ALA89 VAL90 ARG91 VAL92 GLN93 GLY94 LYS95 ASP96 GLU97 VAL98 ILE99 LEU100 THR101 LEU102 ASN103 LYS104 SER105 GLY106 ILE107 GLY108 PRO109 VAL110 THR111 ALA112 ALA113 ASP114 ILE115 THR116 HIS117 ASP118 GLY119 ASP120 VAL121 GLU122 ILE123 VAL124 LYS125 PRO126 GLN127 HIS128 VAL129 ILE130 CYS131 HIS132 LEU133 THR134 ASP135 GLU136 ASN137 ALA138 SER139 ILE140 SER141 MET142 ARG143 ILE144 LYS145 VAL146 GLN147 ARG148 GLY149 ARG150 GLY151 TYR152 VAL153 PRO154 ALA155 SER156 THR157 ARG158 ILE159 HIS160 SER161 GLU162 GLU163 ASP164 GLU165 ARG166 PRO167 ILE168 GLY169 ARG170 LEU171 LEU172 VAL173 ASP174 ALA175 CYS176 TYR177 SER178 PRO179 VAL180 GLU181 ARG182 ILE183 ALA184 TYR185 ASN186 VAL187 GLU188 ALA189 ALA190 ARG191 VAL192 GLU193 GLN194 ARG195 THR196 ASP197 LEU198 ASP199 LYS200 LEU201 VAL202 ILE203 GLU204 MET205 GLU206 THR207 ASN208 GLY209 THR210 ILE211 ASP212 PRO213 GLU214 GLU215 ALA216 ILE217 ARG218 ARG219 ALA220 ALA221 THR222 ILE223 LEU224 ALA225 GLU226 GLN227 LEU228 GLU229 ALA230 PHE231 VAL232 ASP233
Unit 3 TYR3 SER4 TYR5 THR6 GLU7 LYS8 LYS9 ARG10 ILE11 ARG12 LYS13 ASP14 PHE15 GLY16 LYS17 ARG18 PRO19 GLN20 VAL21 LEU22 ASP23 VAL24 PRO25 TYR26 LEU27 LEU28 SER29 ILE30 GLN31 LEU32 ASP33 SER34 PHE35 GLN36 LYS37 PHE38 ILE39 GLU40 GLN41 ASP42 PRO43 GLU44 GLY45 GLN46 TYR47 GLY48 LEU49 GLU50 ALA51 ALA52 PHE53 ARG54 SER55 VAL56 PHE57 PRO58 ILE59 GLN60 SER61 TYR62 SER63 GLY64 ASN65 SER66 GLU67 LEU68 GLN69 TYR70 VAL71 SER72 TYR73 ARG74 LEU75 GLY76 GLU77 PRO78 VAL79 PHE80 ASP81 VAL82 GLN83 GLU84 CYS85 GLN86 ILE87 ARG88 GLY89 VAL90 THR91 TYR92 SER93 ALA94 PRO95 LEU96 ARG97 VAL98 LYS99 LEU100 ARG101 LEU102 VAL103 ILE104 TYR105 GLU106 ARG107 GLU108 ALA109 PRO110 GLU111 GLY112 THR113 VAL114 LYS115 ASP116 ILE117 LYS118 GLU119 GLN120 GLU121 VAL122 TYR123 MET124 GLY125 GLU126 ILE127 PRO128 LEU129 MET130 THR131 ASP132 ASN133 GLY134 THR135 PHE136 VAL137 ILE138 ASN139 GLY140 THR141 GLU142 ARG143 VAL144 ILE145 VAL146 SER147 GLN148 LEU149 HIS150 ARG151 SER152 PRO153 GLY154 VAL155 PHE156 PHE157 ASP158 SER159 ASP160 LYS161 GLY162 LYS163 THR164 HIS165 SER166 SER167 GLY168 LYS169 VAL170 LEU171 TYR172 ASN173 ALA174 ARG175 ILE176 ILE177 PRO178 TYR179 ARG180 GLY181 SER182 TRP183 LEU184 ASP185 PHE186 GLU187 PHE188 ASP189 PRO190 LYS191 ASP192 ASN193 LEU194 PHE195 VAL196 ARG197 ILE198 ASP199 ARG200 ARG201 ARG202 LYS203 LEU204 PRO205 ALA206 THR207 ILE208 ILE209 LEU210 ARG211 ALA212 LEU213 ASN214 TYR215 THR216 THR217 GLU218 GLN219 ILE220 LEU221 ASP222 LEU223 PHE224 PHE225 GLU226 LYS227 VAL228 ILE229 PHE230 GLU231 ILE232 ARG233 ASP234 ASN235 LYS236 LEU237 GLN238 MET239 GLU240 LEU241 VAL242 PRO243 GLU244 ARG245 LEU246 ARG247 GLY248 GLU249 THR250 ALA251 SER252 PHE253 ASP254 ILE255 GLU256 ALA257 ASN258 GLY259 LYS260 VAL261 TYR262 VAL263 GLU264 LYS265 GLY266 ARG267 ARG268 ILE269 THR270 ALA271 ARG272 HIS273 ILE274 ARG275 GLN276 LEU277 GLU278 LYS279 ASP280 ASP281 VAL282 LYS283 LEU284 ILE285 GLU286 VAL287 PRO288 VAL289 GLU290 TYR291 ILE292 ALA293 GLY294 LYS295 VAL296 VAL297 ALA298 LYS299 ASP300 TYR301 ILE302 ASP303 GLU304 SER305 THR306 GLY307 GLU308 LEU309 ILE310 CYS311 ALA312 ALA313 ASN314 MET315 GLU316 LEU317 SER318 LEU319 ASP320 LEU321 LEU322 ALA323 LYS324 LEU325 SER326 GLN327 SER328 GLY329 HIS330 LYS331 ARG332 ILE333 GLU334 THR335 LEU336 PHE337 THR338 ASN339 ASP340 LEU341 ASP342 HIS343 GLY344 PRO345 TYR346 ILE347 SER348 GLU349 THR350 LEU351 ARG352 VAL353 ASP354 PRO355 THR356 ASN357 ASP358 ARG359 LEU360 SER361 ALA362 LEU363 VAL364 GLU365 ILE366 TYR367 ARG368 MET369 MET370 ARG371 PRO372 GLY373 GLU374 PRO375 PRO376 THR377 ARG378 GLU379 ALA380 ALA381 GLU382 SER383 LEU384 PHE385 GLU386 ASN387 LEU388 PHE389 PHE390 SER391 GLU392 ASP393 ARG394 TYR395 ASP396 LEU397 SER398 ALA399 VAL400 GLY401 ARG402 MET403 LYS404 PHE405 ASN406 ARG407 SER408 LEU409 LEU410 ARG411 GLU412 GLU413 ILE414 GLU415 GLY416 SER417 GLY418 ILE419 LEU420 SER421 LYS422 ASP423 ASP424 ILE425 ILE426 ASP427 VAL428 MET429 LYS430 LYS431 LEU432 ILE433 ASP434 ILE435 ARG436 ASN437 GLY438 LYS439 GLY440 GLU441 VAL442 ASP443 ASP444 ILE445 ASP446 HIS447 LEU448 GLY449 ASN450 ARG451 ARG452 ILE453 ARG454 SER455 VAL456 GLY457 GLU458 MET459 ALA460 GLU461 ASN462 GLN463 PHE464 ARG465 VAL466 GLY467 LEU468 VAL469 ARG470 VAL471 GLU472 ARG473 ALA474 VAL475 LYS476 GLU477 ARG478 LEU479 SER480 LEU481 GLY482 ASP483 LEU484 ASP485 THR486 LEU487 MET488 PRO489 GLN490 ASP491 MET492 ILE493 ASN494 ALA495 LYS496 PRO497 ILE498 SER499 ALA500 ALA501 VAL502 LYS503 GLU504 PHE505 PHE506 GLY507 SER508 SER509 GLN510 LEU511 SER512 GLN513 PHE514 MET515 ASP516 GLN517 ASN518 ASN519 PRO520 LEU521 SER522 GLU523 ILE524 THR525 HIS526 LYS527 ARG528 ARG529 ILE530 SER531 ALA532 LEU533 GLY534 PRO535 GLY536 GLY537 LEU538 THR539 ARG540 GLU541 ARG542 ALA543 GLY544 PHE545 GLU546 VAL547 ARG548 ASP549 VAL550 HIS551 PRO552 THR553 HIS554 TYR555 GLY556 ARG557 VAL558 CYS559 PRO560 ILE561 GLU562 THR563 PRO564 GLU565 GLY566 PRO567 ASN568 ILE569 GLY570 LEU571 ILE572 ASN573 SER574 LEU575 SER576 VAL577 TYR578 ALA579 GLN580 THR581 ASN582 GLU583 TYR584 GLY585 PHE586 LEU587 GLU588 THR589 PRO590 TYR591 ARG592 LYS593 VAL594 THR595 ASP596 GLY597 VAL598 VAL599 THR600 ASP601 GLU602 ILE603 HIS604 TYR605 LEU606 SER607 ALA608 ILE609 GLU610 GLU611 GLY612 ASN613 TYR614 VAL615 ILE616 ALA617 GLN618 ALA619 ASN620 SER621 ASN622 LEU623 ASP624 GLU625 GLU626 GLY627 HIS628 PHE629 VAL630 GLU631 ASP632 LEU633 VAL634 THR635 CYS636 ARG637 SER638 LYS639 GLY640 GLU641 SER642 SER643 LEU644 PHE645 SER646 ARG647 ASP648 GLN649 VAL650 ASP651 TYR652 MET653 ASP654 VAL655 SER656 THR657 GLN658 GLN659 VAL660 VAL661 SER662 VAL663 GLY664 ALA665 SER666 LEU667 ILE668 PRO669 PHE670 LEU671 GLU672 HIS673 ASP674 ASP675 ALA676 ASN677 ARG678 ALA679 LEU680 MET681 GLY682 ALA683 ASN684 MET685 GLN686 ARG687 GLN688 ALA689 VAL690 PRO691 THR692 LEU693 ARG694 ALA695 ASP696 LYS697 PRO698 LEU699 VAL700 GLY701 THR702 GLY703 MET704 GLU705 ARG706 ALA707 VAL708 ALA709 VAL710 ASP711 SER712 GLY713 VAL714 THR715 ALA716 VAL717 ALA718 LYS719 ARG720 GLY721 GLY722 VAL723 VAL724 GLN725 TYR726 VAL727 ASP728 ALA729 SER730 ARG731 ILE732 VAL733 ILE734 LYS735 VAL736 ASN737 GLU738 ASP739 GLU740 MET741 TYR742 PRO743 GLY744 GLU745 ALA746 GLY747 ILE748 ASP749 ILE750 TYR751 ASN752 LEU753 THR754 LYS755 TYR756 THR757 ARG758 SER759 ASN760 GLN761 ASN762 THR763 CYS764 ILE765 ASN766 GLN767 MET768 PRO769 CYS770 VAL771 SER772 LEU773 GLY774 GLU775 PRO776 VAL777 GLU778 ARG779 GLY780 ASP781 VAL782 LEU783 ALA784 ASP785 GLY786 PRO787 SER788 THR789 ASP790 LEU791 GLY792 GLU793 LEU794 ALA795 LEU796 GLY797 GLN798 ASN799 MET800 ARG801 VAL802 ALA803 PHE804 MET805 PRO806 TRP807 ASN808 GLY809 TYR810 ASN811 PHE812 GLU813 ASP814 SER815 ILE816 LEU817 VAL818 SER819 GLU820 ARG821 VAL822 VAL823 GLN824 GLU825 ASP826 ARG827 PHE828 THR829 THR830 ILE831 HIS832 ILE833 GLN834 GLU835 LEU836 ALA837 CYS838 VAL839 SER840 ARG841 ASP842 THR843 LYS844 LEU845 GLY846 PRO847 GLU848 GLU849 ILE850 THR851 ALA852 ASP853 ILE854 PRO855 ASN856 VAL857 GLY858 GLU859 ALA860 ALA861 LEU862 SER863 LYS864 LEU865 ASP866 GLU867 SER868 GLY869 ILE870 VAL871 TYR872 ILE873 GLY874 ALA875 GLU876 VAL877 THR878 GLY879 GLY880 ASP881 ILE882 LEU883 VAL884 GLY885 LYS886 VAL887 THR888 PRO889 LYS890 GLY891 GLU892 THR893 GLN894 LEU895 THR896 PRO897 GLU898 GLU899 LYS900 LEU901 LEU902 ARG903 ALA904 ILE905 PHE906 GLY907 GLU908 LYS909 ALA910 SER911 ASP912 VAL913 LYS914 ASP915 SER916 SER917 LEU918 ARG919 VAL920 PRO921 ASN922 GLY923 VAL924 SER925 GLY926 THR927 VAL928 ILE929 ASP930 VAL931 GLN932 VAL933 PHE934 THR935 ARG936 ASP937 GLY938 VAL939 GLU940 LYS941 ASP942 LYS943 ARG944 ALA945 LEU946 GLU947 ILE948 GLU949 GLU950 MET951 GLN952 LEU953 LYS954 GLN955 ALA956 LYS957 LYS958 ASP959 LEU960 SER961 GLU962 GLU963 LEU964 GLN965 ILE966 LEU967 GLU968 ALA969 GLY970 LEU971 PHE972 SER973 ARG974 ILE975 ARG976 ALA977 VAL978 LEU979 VAL980 ALA981 GLY982 GLY983 VAL984 GLU985 ALA986 GLU987 LYS988 LEU989 ASP990 LYS991 LEU992 PRO993 ARG994 ASP995 ARG996 TRP997 LEU998 GLU999 LEU1000 GLY1001 LEU1002 THR1003 ASP1004 GLU1005 GLU1006 LYS1007 GLN1008 ASN1009 GLN1010 LEU1011 GLU1012 GLN1013 LEU1014 ALA1015 GLU1016 GLN1017 TYR1018 ASP1019 GLU1020 LEU1021 LYS1022 HIS1023 GLU1024 PHE1025 GLU1026 LYS1027 LYS1028 LEU1029 GLU1030 ALA1031 LYS1032 ARG1033 ARG1034 LYS1035 ILE1036 THR1037 GLN1038 GLY1039 ASP1040 ASP1041 LEU1042 ALA1043 PRO1044 GLY1045 VAL1046 LEU1047 LYS1048 ILE1049 VAL1050 LYS1051 VAL1052 TYR1053 LEU1054 ALA1055 VAL1056 LYS1057 ARG1058 ARG1059 ILE1060 GLN1061 PRO1062 GLY1063 ASP1064 LYS1065 MET1066 ALA1067 GLY1068 ARG1069 HIS1070 GLY1071 ASN1072 LYS1073 GLY1074 VAL1075 ILE1076 SER1077 LYS1078 ILE1079 ASN1080 PRO1081 ILE1082 GLU1083 ASP1084 MET1085 PRO1086 TYR1087 ASP1088 GLU1089 ASN1090 GLY1091 THR1092 PRO1093 VAL1094 ASP1095 ILE1096 VAL1097 LEU1098 ASN1099 PRO1100 LEU1101 GLY1102 VAL1103 PRO1104 SER1105 ARG1106 MET1107 ASN1108 ILE1109 GLY1110 GLN1111 ILE1112 LEU1113 GLU1114 THR1115 HIS1116 LEU1117 GLY1118 MET1119 ALA1120 ALA1121 LYS1122 GLY1123 ILE1124 GLY1125 ASP1126 LYS1127 ILE1128 ASN1129 ALA1130 MET1131 LEU1132 LYS1133 GLN1134 GLN1135 GLN1136 GLU1137 VAL1138 ALA1139 LYS1140 LEU1141 ARG1142 GLU1143 PHE1144 ILE1145 GLN1146 ARG1147 ALA1148 TYR1149 ASP1150 LEU1151 GLY1152 ALA1153 ASP1154 VAL1155 ARG1156 GLN1157 LYS1158 VAL1159 ASP1160 LEU1161 SER1162 THR1163 PHE1164 SER1165 ASP1166 GLU1167 GLU1168 VAL1169 MET1170 ARG1171 LEU1172 ALA1173 GLU1174 ASN1175 LEU1176 ARG1177 LYS1178 GLY1179 MET1180 PRO1181 ILE1182 ALA1183 THR1184 PRO1185 VAL1186 PHE1187 ASP1188 GLY1189 ALA1190 LYS1191 GLU1192 ALA1193 GLU1194 ILE1195 LYS1196 GLU1197 LEU1198 LEU1199 LYS1200 LEU1201 GLY1202 ASP1203 LEU1204 PRO1205 THR1206 SER1207 GLY1208 GLN1209 ILE1210 ARG1211 LEU1212 TYR1213 ASP1214 GLY1215 ARG1216 THR1217 GLY1218 GLU1219 GLN1220 PHE1221 GLU1222 ARG1223 PRO1224 VAL1225 THR1226 VAL1227 GLY1228 TYR1229 MET1230 TYR1231 MET1232 LEU1233 LYS1234 LEU1235 ASN1236 HIS1237 LEU1238 VAL1239 ASP1240 ASP1241 LYS1242 MET1243 HIS1244 ALA1245 ARG1246 SER1247 THR1248 GLY1249 SER1250 TYR1251 SER1252 LEU1253 VAL1254 THR1255 GLN1256 GLN1257 PRO1258 LEU1259 GLY1260 GLY1261 LYS1262 ALA1263 GLN1264 PHE1265 GLY1266 GLY1267 GLN1268 ARG1269 PHE1270 GLY1271 GLU1272 MET1273 GLU1274 VAL1275 TRP1276 ALA1277 LEU1278 GLU1279 ALA1280 TYR1281 GLY1282 ALA1283 ALA1284 TYR1285 THR1286 LEU1287 GLN1288 GLU1289 MET1290 LEU1291 THR1292 VAL1293 LYS1294 SER1295 ASP1296 ASP1297 VAL1298 ASN1299 GLY1300 ARG1301 THR1302 LYS1303 MET1304 TYR1305 LYS1306 ASN1307 ILE1308 VAL1309 ASP1310 GLY1311 ASN1312 HIS1313 GLN1314 MET1315 GLU1316 PRO1317 GLY1318 MET1319 PRO1320 GLU1321 SER1322 PHE1323 ASN1324 VAL1325 LEU1326 LEU1327 LYS1328 GLU1329 ILE1330 ARG1331 SER1332 LEU1333 GLY1334 ILE1335 ASN1336 ILE1337 GLU1338 LEU1339 GLU1340 ASP1341 GLU1342
Unit 4 GLU15 GLU16 PHE17 ASP18 ALA19 ILE20 LYS21 ILE22 ALA23 LEU24 ALA25 SER26 PRO27 ASP28 MET29 ILE30 ARG31 SER32 TRP33 SER34 PHE35 GLY36 GLU37 VAL38 LYS39 LYS40 PRO41 GLU42 THR43 ILE44 ASN45 TYR46 ARG47 THR48 PHE49 LYS50 PRO51 GLU52 ARG53 ASP54 GLY55 LEU56 PHE57 CYS58 ALA59 ARG60 ILE61 PHE62 GLY63 PRO64 VAL65 LYS66 ASP67 TYR68 GLU69 CYS70 LEU71 CYS72 GLY73 LYS74 TYR75 LYS76 ARG77 LEU78 LYS79 HIS80 ARG81 GLY82 VAL83 ILE84 CYS85 GLU86 LYS87 CYS88 GLY89 VAL90 GLU91 VAL92 THR93 GLN94 THR95 LYS96 VAL97 ARG98 ARG99 GLU100 ARG101 MET102 GLY103 HIS104 ILE105 GLU106 LEU107 ALA108 SER109 PRO110 THR111 ALA112 HIS113 ILE114 TRP115 PHE116 LEU117 LYS118 SER119 LEU120 PRO121 SER122 ARG123 ILE124 GLY125 LEU126 LEU127 LEU128 ASP129 MET130 PRO131 LEU132 ARG133 ASP134 ILE135 GLU136 ARG137 VAL138 LEU139 TYR140 PHE141 GLU142 SER143 TYR144 VAL145 VAL146 ILE147 GLU148 GLY149 GLY150 MET151 THR152 ASN153 LEU154 GLU155 ARG156 GLN157 GLN158 ILE159 LEU160 THR161 GLU162 GLU163 GLN164 TYR165 LEU166 ASP167 ALA168 LEU169 GLU170 GLU171 PHE172 GLY173 ASP174 GLU175 PHE176 ASP177 ALA178 LYS179 MET180 GLY181 ALA182 GLU183 ALA184 ILE185 GLN186 ALA187 LEU188 LEU189 LYS190 SER191 MET192 ASP193 LEU194 GLU195 GLN196 GLU197 CYS198 GLU199 GLN200 LEU201 ARG202 GLU203 GLU204 LEU205 ASN206 GLU207 THR208 ASN209 SER210 GLU211 THR212 LYS213 ARG214 LYS215 LYS216 LEU217 THR218 LYS219 ARG220 ILE221 LYS222 LEU223 LEU224 GLU225 ALA226 PHE227 VAL228 GLN229 SER230 GLY231 ASN232 LYS233 PRO234 GLU235 TRP236 MET237 ILE238 LEU239 THR240 VAL241 LEU242 PRO243 VAL244 LEU245 PRO246 PRO247 ASP248 LEU249 ARG250 PRO251 LEU252 VAL253 PRO254 LEU255 ASP256 GLY257 GLY258 ARG259 PHE260 ALA261 THR262 SER263 ASP264 LEU265 ASN266 ASP267 LEU268 TYR269 ARG270 ARG271 VAL272 ILE273 ASN274 ARG275 ASN276 ASN277 ARG278 LEU279 LYS280 ARG281 LEU282 LEU283 ASP284 LEU285 ALA286 ALA287 PRO288 ASP289 ILE290 ILE291 VAL292 ARG293 ASN294 GLU295 LYS296 ARG297 MET298 LEU299 GLN300 GLU301 ALA302 VAL303 ASP304 ALA305 LEU306 LEU307 ASP308 ASN309 GLY310 ARG311 ARG312 GLY313 ARG314 ALA315 ILE316 THR317 GLY318 SER319 ASN320 LYS321 ARG322 PRO323 LEU324 LYS325 SER326 LEU327 ALA328 ASP329 MET330 ILE331 LYS332 GLY333 LYS334 GLN335 GLY336 ARG337 PHE338 ARG339 GLN340 ASN341 LEU342 LEU343 GLY344 LYS345 ARG346 VAL347 ASP348 TYR349 SER350 GLY351 ARG352 SER353 VAL354 ILE355 THR356 VAL357 GLY358 PRO359 TYR360 LEU361 ARG362 LEU363 HIS364 GLN365 CYS366 GLY367 LEU368 PRO369 LYS370 LYS371 MET372 ALA373 LEU374 GLU375 LEU376 PHE377 LYS378 PRO379 PHE380 ILE381 TYR382 GLY383 LYS384 LEU385 GLU386 LEU387 ARG388 GLY389 LEU390 ALA391 THR392 THR393 ILE394 LYS395 ALA396 ALA397 LYS398 LYS399 MET400 VAL401 GLU402 ARG403 GLU404 GLU405 ALA406 VAL407 VAL408 TRP409 ASP410 ILE411 LEU412 ASP413 GLU414 VAL415 ILE416 ARG417 GLU418 HIS419 PRO420 VAL421 LEU422 LEU423 ASN424 ARG425 ALA426 PRO427 THR428 LEU429 HIS430 ARG431 LEU432 GLY433 ILE434 GLN435 ALA436 PHE437 GLU438 PRO439 VAL440 LEU441 ILE442 GLU443 GLY444 LYS445 ALA446 ILE447 GLN448 LEU449 HIS450 PRO451 LEU452 VAL453 CYS454 ALA455 ALA456 TYR457 ASN458 ALA459 ASP460 PHE461 ASP462 GLY463 ASP464 GLN465 MET466 ALA467 VAL468 HIS469 VAL470 PRO471 LEU472 THR473 LEU474 GLU475 ALA476 GLN477 LEU478 GLU479 ALA480 ARG481 ALA482 LEU483 MET484 MET485 SER486 THR487 ASN488 ASN489 ILE490 LEU491 SER492 PRO493 ALA494 ASN495 GLY496 GLU497 PRO498 ILE499 ILE500 VAL501 PRO502 SER503 GLN504 ASP505 VAL506 VAL507 LEU508 GLY509 LEU510 TYR511 TYR512 MET513 THR514 ARG515 ASP516 CYS517 VAL518 ASN519 ALA520 LYS521 GLY522 GLU523 GLY524 MET525 VAL526 LEU527 THR528 GLY529 PRO530 LYS531 GLU532 ALA533 GLU534 ARG535 LEU536 TYR537 ARG538 SER539 GLY540 LEU541 ALA542 SER543 LEU544 HIS545 ALA546 ARG547 VAL548 LYS549 VAL550 ARG551 ILE552 THR553 GLU554 TYR555 GLU556 LYS557 ASP558 ALA559 ASN560 GLY561 GLU562 LEU563 VAL564 ALA565 LYS566 THR567 SER568 LEU569 LYS570 ASP571 THR572 THR573 VAL574 GLY575 ARG576 ALA577 ILE578 LEU579 TRP580 MET581 ILE582 VAL583 PRO584 LYS585 GLY586 LEU587 PRO588 TYR589 SER590 ILE591 VAL592 ASN593 GLN594 ALA595 LEU596 GLY597 LYS598 LYS599 ALA600 ILE601 SER602 LYS603 MET604 LEU605 ASN606 THR607 CYS608 TYR609 ARG610 ILE611 LEU612 GLY613 LEU614 LYS615 PRO616 THR617 VAL618 ILE619 PHE620 ALA621 ASP622 GLN623 ILE624 MET625 TYR626 THR627 GLY628 PHE629 ALA630 TYR631 ALA632 ALA633 ARG634 SER635 GLY636 ALA637 SER638 VAL639 GLY640 ILE641 ASP642 ASP643 MET644 VAL645 ILE646 PRO647 GLU648 LYS649 LYS650 HIS651 GLU652 ILE653 ILE654 SER655 GLU656 ALA657 GLU658 ALA659 GLU660 VAL661 ALA662 GLU663 ILE664 GLN665 GLU666 GLN667 PHE668 GLN669 SER670 GLY671 LEU672 VAL673 THR674 ALA675 GLY676 GLU677 ARG678 TYR679 ASN680 LYS681 VAL682 ILE683 ASP684 ILE685 TRP686 ALA687 ALA688 ALA689 ASN690 ASP691 ARG692 VAL693 SER694 LYS695 ALA696 MET697 MET698 ASP699 ASN700 LEU701 GLN702 THR703 GLU704 THR705 VAL706 ILE707 ASN708 ARG709 ASP710 GLY711 GLN712 GLU713 GLU714 LYS715 GLN716 VAL717 SER718 PHE719 ASN720 SER721 ILE722 TYR723 MET724 MET725 ALA726 ASP727 SER728 GLY729 ALA730 ARG731 GLY732 SER733 ALA734 ALA735 GLN736 ILE737 ARG738 GLN739 LEU740 ALA741 GLY742 MET743 ARG744 GLY745 LEU746 MET747 ALA748 LYS749 PRO750 ASP751 GLY752 SER753 ILE754 ILE755 GLU756 THR757 PRO758 ILE759 THR760 ALA761 ASN762 PHE763 ARG764 GLU765 GLY766 LEU767 ASN768 VAL769 LEU770 GLN771 TYR772 PHE773 ILE774 SER775 THR776 HIS777 GLY778 ALA779 ARG780 LYS781 GLY782 LEU783 ALA784 ASP785 THR786 ALA787 LEU788 LYS789 THR790 ALA791 ASN792 SER793 GLY794 TYR795 LEU796 THR797 ARG798 ARG799 LEU800 VAL801 ASP802 VAL803 ALA804 GLN805 ASP806 LEU807 VAL808 VAL809 THR810 GLU811 ASP812 ASP813 CYS814 GLY815 THR816 HIS817 GLU818 GLY819 ILE820 MET821 MET822 THR823 PRO824 VAL825 ILE826 GLU827 GLY828 GLY829 ASP830 VAL831 LYS832 GLU833 PRO834 LEU835 ARG836 ASP837 ARG838 VAL839 LEU840 GLY841 ARG842 VAL843 THR844 ALA845 GLU846 ASP847 VAL848 LEU849 LYS850 PRO851 GLY852 THR853 ALA854 ASP855 ILE856 LEU857 VAL858 PRO859 ARG860 ASN861 THR862 LEU863 LEU864 HIS865 GLU866 GLN867 TRP868 CYS869 ASP870 LEU871 LEU872 GLU873 GLU874 ASN875 SER876 VAL877 ASP878 ALA879 VAL880 LYS881 VAL882 ARG883 SER884 VAL885 VAL886 SER887 CYS888 ASP889 THR890 ASP891 PHE892 GLY893 VAL894 CYS895 ALA896 HIS897 CYS898 TYR899 GLY900 ARG901 ASP902 LEU903 ALA904 ARG905 GLY906 HIS907 ILE908 ILE909 ASN910 LYS911 GLY912 GLU913 ALA914 ILE915 GLY916 VAL917 ILE918 ALA919 ALA920 GLN921 SER922 ILE923 GLY924 GLU925 PRO926 GLY927 THR928 GLN929 LEU930 THR931 MET932 ARG933 THR934 PHE935 HIS936 ILE937 GLY938 GLY939 ALA940 ALA941 SER942 ARG943 ALA944 ALA945 ALA946 GLU947 SER948 SER949 ILE950 GLN951 VAL952 LYS953 ASN954 LYS955 GLY956 SER957 ILE958 LYS959 LEU960 SER961 ASN962 VAL963 LYS964 SER965 VAL966 VAL967 ASN968 SER969 SER970 GLY971 LYS972 LEU973 VAL974 ILE975 THR976 SER977 ARG978 ASN979 THR980 GLU981 LEU982 LYS983 LEU984 ILE985 ASP986 GLU987 PHE988 GLY989 ARG990 THR991 LYS992 GLU993 SER994 TYR995 LYS996 VAL997 PRO998 TYR999 GLY1000 ALA1001 VAL1002 LEU1003 ALA1004 LYS1005 GLY1006 ASP1007 GLY1008 GLU1009 GLN1010 VAL1011 ALA1012 GLY1013 GLY1014 GLU1015 THR1016 VAL1017 ALA1018 ASN1019 TRP1020 ASP1021 PRO1022 HIS1023 THR1024 MET1025 PRO1026 VAL1027 ILE1028 THR1029 GLU1030 VAL1031 SER1032 GLY1033 PHE1034 VAL1035 ARG1036 PHE1037 THR1038 ASP1039 MET1040 ILE1041 ASP1042 GLY1043 GLN1044 THR1045 ILE1046 THR1047 ARG1048 GLN1049 THR1050 ASP1051 GLU1052 LEU1053 THR1054 GLY1055 LEU1056 SER1057 SER1058 LEU1059 VAL1060 VAL1061 LEU1062 ASP1063 SER1064 ALA1065 GLU1066 ARG1067 THR1068 ALA1069 GLY1070 GLY1071 LYS1072 ASP1073 LEU1074 ARG1075 PRO1076 ALA1077 LEU1078 LYS1079 ILE1080 VAL1081 ASP1082 ALA1083 GLN1084 GLY1085 ASN1086 ASP1087 VAL1088 LEU1089 ILE1090 PRO1091 GLY1092 THR1093 ASP1094 MET1095 PRO1096 ALA1097 GLN1098 TYR1099 PHE1100 LEU1101 PRO1102 GLY1103 LYS1104 ALA1105 ILE1106 VAL1107 GLN1108 LEU1109 GLU1110 ASP1111 GLY1112 VAL1113 GLN1114 ILE1115 SER1116 SER1117 GLY1118 ASP1119 THR1120 LEU1121 ALA1122 ARG1123 ILE1124 PRO1125 GLN1126 GLU1127 SER1128 GLY1129 GLY1130 THR1131 LYS1132 ASP1133 ILE1134 THR1135 GLY1136 GLY1137 LEU1138 PRO1139 ARG1140 VAL1141 ALA1142 ASP1143 LEU1144 PHE1145 GLU1146 ALA1147 ARG1148 ARG1149 PRO1150 LYS1151 GLU1152 PRO1153 ALA1154 ILE1155 LEU1156 ALA1157 GLU1158 ILE1159 SER1160 GLY1161 ILE1162 VAL1163 SER1164 PHE1165 GLY1166 LYS1167 GLU1168 THR1169 LYS1170 GLY1171 LYS1172 ARG1173 ARG1174 LEU1175 VAL1176 ILE1177 THR1178 PRO1179 VAL1180 ASP1181 GLY1182 SER1183 ASP1184 PRO1185 TYR1186 GLU1187 GLU1188 MET1189 ILE1190 PRO1191 LYS1192 TRP1193 ARG1194 GLN1195 LEU1196 ASN1197 VAL1198 PHE1199 GLU1200 GLY1201 GLU1202 ARG1203 VAL1204 GLU1205 ARG1206 GLY1207 ASP1208 VAL1209 ILE1210 SER1211 ASP1212 GLY1213 PRO1214 GLU1215 ALA1216 PRO1217 HIS1218 ASP1219 ILE1220 LEU1221 ARG1222 LEU1223 ARG1224 GLY1225 VAL1226 HIS1227 ALA1228 VAL1229 THR1230 ARG1231 TYR1232 ILE1233 VAL1234 ASN1235 GLU1236 VAL1237 GLN1238 ASP1239 VAL1240 TYR1241 ARG1242 LEU1243 GLN1244 GLY1245 VAL1246 LYS1247 ILE1248 ASN1249 ASP1250 LYS1251 HIS1252 ILE1253 GLU1254 VAL1255 ILE1256 VAL1257 ARG1258 GLN1259 MET1260 LEU1261 ARG1262 LYS1263 ALA1264 THR1265 ILE1266 VAL1267 ASN1268 ALA1269 GLY1270 SER1271 SER1272 ASP1273 PHE1274 LEU1275 GLU1276 GLY1277 GLU1278 GLN1279 VAL1280 GLU1281 TYR1282 SER1283 ARG1284 VAL1285 LYS1286 ILE1287 ALA1288 ASN1289 ARG1290 GLU1291 LEU1292 GLU1293 ALA1294 ASN1295 GLY1296 LYS1297 VAL1298 GLY1299 ALA1300 THR1301 TYR1302 SER1303 ARG1304 ASP1305 LEU1306 LEU1307 GLY1308 ILE1309 THR1310 LYS1311 ALA1312 SER1313 LEU1314 ALA1315 THR1316 GLU1317 SER1318 PHE1319 ILE1320 SER1321 ALA1322 ALA1323 SER1324 PHE1325 GLN1326 GLU1327 THR1328 THR1329 ARG1330 VAL1331 LEU1332 THR1333 GLU1334 ALA1335 ALA1336 VAL1337 ALA1338 GLY1339 LYS1340 ARG1341 ASP1342 GLU1343 LEU1344 ARG1345 GLY1346 LEU1347 LYS1348 GLU1349 ASN1350 VAL1351 ILE1352 VAL1353 GLY1354 ARG1355 LEU1356 ILE1357 PRO1358 ALA1359 GLY1360 THR1361 GLY1362 TYR1363 ALA1364 TYR1365 HIS1366 GLN1367 ASP1368 ARG1369 MET1370 ARG1371 ARG1372 ARG1373 ALA1374 ALA1375 GLY1376
Unit 5 ALA2 ARG3 VAL4 THR5 VAL6 GLN7 ASP8 ALA9 VAL10 GLU11 LYS12 ILE13 GLY14 ASN15 ARG16 PHE17 ASP18 LEU19 VAL20 LEU21 VAL22 ALA23 ALA24 ARG25 ARG26 ALA27 ARG28 GLN29 MET30 GLN31 VAL32 GLY33 GLY34 LYS35 ASP36 PRO37 LEU38 VAL39 PRO40 GLU41 GLU42 ASN43 ASP44 LYS45 THR46 THR47 VAL48 ILE49 ALA50 LEU51 ARG52 GLU53 ILE54 GLU55 GLU56 GLY57 LEU58 ILE59 ASN60 ASN61 GLN62 ILE63 LEU64 ASP65 VAL66 ARG67 GLU68 ARG69 GLN70 GLU71 GLN72 GLN73 GLU74 GLN75 GLU76 ALA77 ALA78 GLU79 LEU80
Unit 6 ARG53 VAL54 LEU55 ASP56 ALA57 THR58 GLN59 LEU60 TYR61 LEU62 GLY63 GLU64 ILE65 GLY66 TYR67 SER68 PRO69 LEU70 LEU71 THR72 ALA73 GLU74 GLU75 GLU76 VAL77 TYR78 PHE79 ALA80 ARG81 ARG82 ALA83 LEU84 ARG85 GLY86 ASP87 VAL88 ALA89 SER90 ARG91 ARG92 ARG93 MET94 ILE95 GLU96 SER97 ASN98 LEU99 ARG100 LEU101 VAL102 VAL103 LYS104 ILE105 ALA106 ARG107 ARG108 TYR109 GLY110 ASN111 ARG112 GLY113 LEU114 ALA115 LEU116 LEU117 ASP118 LEU119 ILE120 GLU121 GLU122 GLY123 ASN124 LEU125 GLY126 LEU127 ILE128 ARG129 ALA130 VAL131 GLU132 LYS133 PHE134 ASP135 PRO136 GLU137 ARG138 GLY139 PHE140 ARG141 PHE142 SER143 THR144 TYR145 ALA146 THR147 TRP148 TRP149 ILE150 ARG151 GLN152 THR153 ILE154 GLU155 ARG156 ALA157 ILE158 MET159 ASN160 GLN161 THR162 ARG163 THR164 ILE165 ARG166 LEU167 PRO168 ILE169 HIS170 ILE171 VAL172 LYS173 GLU174 LEU175 ASN176 VAL177 TYR178 LEU179 ARG180 THR181 ALA182 ARG183 GLU184 LEU185 SER186 HIS187 LYS188 LEU189 ASP190 HIS191 GLU192 PRO193 SER194 ALA195 GLU196 GLU197 ILE198 ALA199 GLU200 GLN201 LEU202 ASP203 LYS204 PRO205 VAL206 ASP207 ASP208 VAL209 SER210 ARG211 MET212 LEU213 ARG214 LEU215 ASN216 GLU217 ARG218 ILE219 THR220 SER221 VAL222 ASP223 THR224 PRO225 LEU226 GLY227 GLY228 ASP229 SER230 GLU231 LYS232 ALA233 LEU234 LEU235 ASP236 ILE237 LEU238 ALA239 ASP240 GLU241 LYS242 GLU243 ASN244 GLY245 PRO246 GLU247 ASP248 THR249 THR250 GLN251 ASP252 ASP253 ASP254 MET255 LYS256 GLN257 SER258 ILE259 VAL260 LYS261 TRP262 LEU263 PHE264 GLU265 LEU266 ASN267 ALA268 LYS269 GLN270 ARG271 GLU272 VAL273 LEU274 ALA275 ARG276 ARG277 PHE278 GLY279 LEU280 LEU281 GLY282 TYR283 GLU284 ALA285 ALA286 THR287 LEU288 GLU289 ASP290 VAL291 GLY292 ARG293 GLU294 ILE295 GLY296 LEU297 THR298 ARG299 GLU300 ARG301 VAL302 ARG303 GLN304 ILE305 GLN306 VAL307 GLU308 GLY309 LEU310 ARG311 ARG312 LEU313 ARG314 GLU315 ILE316 LEU317 GLN318 THR319 GLN320 GLY321 LEU322 ASN323 ILE324 GLU325 ALA326 LEU327 PHE328 LEU329
Nucleic acids
Unit 9 GTP14 A15 G16 U17
Other macromolecules
Unit 7 DC27 DA28 DC29 DG30 DT31 DA32 DT33 DG34 DC35 DT36 DA37 DT38 DA39 DA40 DT41 DG42 DT43 DG44 DT45 DG46 DC47 DA48 DG49 DT50 DC51 DT52 DG53 DA54 DC55 DG56 DC57 DG58 DG59
Unit 8 DC4 DC5 DG6 DC7 DG8 DT9 DC10 DA11 DG12 DA13 DC14 DT15 DC16 DG17 DT18 DA19 DG20 DG21 DA22 DT23 DT24 DA25 DT26 DA27 DG28 DC29 DA30 DT31 DA32 DC33 DG34 DT35 DG36
Ligands
Unit 10 ZN1501 ZN1502 MG1503
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany