5IIA - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF RED ABALONE EGG VERL REPEAT 3 IN COMPLE SPERM LYSIN AT 1.7 A RESOLUTION (CRYSTAL FORM I)
• Keywords: CELL ADHESION, FERTILIZATION, EGG-SPERM INTERACTION, GAMETE RECOGNITION, SPERM RECEPTOR, EGG COAT, VITELLINE ENVELOPE, DOMAIN, ZP-N DOMAIN, SPERM ACROSOME, EGG COAT PENETRATION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5IIA	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	EGG-LYSIN	A	125	2129	0
2	Protein	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	B	107	1665	0
3	Protein	EGG-LYSIN	C	125	2129	0
4	Protein	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	D	107	1662	0
5	Protein	EGG-LYSIN	E	125	2129	0
6	Protein	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	F	105	1641	0
7	Protein	EGG-LYSIN	G	126	2151	0
8	Protein	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	H	102	1604	0
9	Ligand	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	B	2	0	56
10	Ligand	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	D	2	0	56
11	Ligand	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	F	2	0	56
12	Ligand	VITELLINE ENVELOPE SPERM LYSIN RECEPTOR	H	2	0	56
13	Water			577	0	577
total				1507	15110	801

Proteins

Unit 1	PHE 28 LEU 29 ASN 30 LYS 31 ALA 32 PHE 33 GLU 34 VAL 35 ALA 36 LEU 37 LYS 38 VAL 39 GLN 40 ILE 41 ILE 42 ALA 43 GLY 44 PHE 45 ASP 46 ARG 47 GLY 48 LEU 49 VAL 50 LYS 51 TRP 52 LEU 53 ARG 54 VAL 55 HIS 56 GLY 57 ARG 58 THR 59 LEU 60 SER 61 THR 62 VAL 63 GLN 64 LYS 65 LYS 66 ALA 67 LEU 68 TYR 69 PHE 70 VAL 71 ASN 72 ARG 73 ARG 74 TYR 75 MET 76 GLN 77 THR 78 HIS 79 TRP 80 ALA 81 ASN 82 TYR 83 MET 84 LEU 85 TRP 86 ILE 87 ASN 88 LYS 89 LYS 90 ILE 91 ASP 92 ALA 93 LEU 94 GLY 95 ARG 96 THR 97 PRO 98 VAL 99 VAL 100 GLY 101 ASP 102 TYR 103 THR 104 ARG 105 LEU 106 GLY 107 ALA 108 GLU 109 ILE 110 GLY 111 ARG 112 ARG 113 ILE 114 ASP 115 MET 116 ALA 117 TYR 118 PHE 119 TYR 120 ASP 121 PHE 122 LEU 123 LYS 124 ASP 125 LYS 126 ASN 127 MET 128 ILE 129 PRO 130 LYS 131 TYR 132 LEU 133 PRO 134 TYR 135 MET 136 GLU 137 GLU 138 ILE 139 ASN 140 ARG 141 MET 142 ARG 143 PRO 144 ALA 145 ASP 146 VAL 147 PRO 148 VAL 149 LYS 150 TYR 151 MET 152
Unit 2	ALA 338 ALA 339 ASP 340 TRP 341 ASP 342 VAL 343 TYR 344 CYS 345 SER 346 GLN 347 ASP 348 GLU 349 SER 350 ILE 351 PRO 352 ALA 353 LYS 354 PHE 355 ILE 356 SER 357 ARG 358 LEU 359 VAL 360 THR 361 ALA 366 LEU 367 GLU 368 LYS 369 THR 370 GLU 371 ILE 372 ASN 373 CYS 374 SER 375 ASN 376 GLY 377 LEU 378 VAL 379 PRO 380 ILE 381 THR 382 GLN 383 GLU 384 PHE 385 GLY 386 ILE 387 ASN 388 MET 389 MET 390 LEU 391 ILE 392 GLN 393 TYR 394 THR 395 ARG 396 ASN 397 GLU 398 LEU 399 LEU 400 ASP 401 SER 402 PRO 403 GLY 404 MET 405 CYS 406 VAL 407 PHE 408 TRP 409 GLY 410 PRO 411 TYR 412 SER 413 VAL 414 PRO 415 LYS 416 ASN 417 ASP 418 THR 419 VAL 420 VAL 421 LEU 422 TYR 423 THR 424 VAL 425 THR 426 ALA 427 ARG 428 LEU 429 LYS 430 TRP 431 SER 432 GLU 433 GLY 434 PRO 435 PRO 436 THR 437 ASN 438 LEU 439 SER 440 ILE 441 GLN 442 CYS 443 TYR 444 MET 445 PRO 446 LYS 447 SER 448
Unit 3	PHE 28 LEU 29 ASN 30 LYS 31 ALA 32 PHE 33 GLU 34 VAL 35 ALA 36 LEU 37 LYS 38 VAL 39 GLN 40 ILE 41 ILE 42 ALA 43 GLY 44 PHE 45 ASP 46 ARG 47 GLY 48 LEU 49 VAL 50 LYS 51 TRP 52 LEU 53 ARG 54 VAL 55 HIS 56 GLY 57 ARG 58 THR 59 LEU 60 SER 61 THR 62 VAL 63 GLN 64 LYS 65 LYS 66 ALA 67 LEU 68 TYR 69 PHE 70 VAL 71 ASN 72 ARG 73 ARG 74 TYR 75 MET 76 GLN 77 THR 78 HIS 79 TRP 80 ALA 81 ASN 82 TYR 83 MET 84 LEU 85 TRP 86 ILE 87 ASN 88 LYS 89 LYS 90 ILE 91 ASP 92 ALA 93 LEU 94 GLY 95 ARG 96 THR 97 PRO 98 VAL 99 VAL 100 GLY 101 ASP 102 TYR 103 THR 104 ARG 105 LEU 106 GLY 107 ALA 108 GLU 109 ILE 110 GLY 111 ARG 112 ARG 113 ILE 114 ASP 115 MET 116 ALA 117 TYR 118 PHE 119 TYR 120 ASP 121 PHE 122 LEU 123 LYS 124 ASP 125 LYS 126 ASN 127 MET 128 ILE 129 PRO 130 LYS 131 TYR 132 LEU 133 PRO 134 TYR 135 MET 136 GLU 137 GLU 138 ILE 139 ASN 140 ARG 141 MET 142 ARG 143 PRO 144 ALA 145 ASP 146 VAL 147 PRO 148 VAL 149 LYS 150 TYR 151 MET 152
Unit 4	ALA 337 ALA 338 ALA 339 ASP 340 TRP 341 ASP 342 VAL 343 TYR 344 CYS 345 SER 346 GLN 347 ASP 348 GLU 349 SER 350 ILE 351 PRO 352 ALA 353 LYS 354 PHE 355 ILE 356 SER 357 ARG 358 LEU 359 GLN 365 ALA 366 LEU 367 GLU 368 LYS 369 THR 370 GLU 371 ILE 372 ASN 373 CYS 374 SER 375 ASN 376 GLY 377 LEU 378 VAL 379 PRO 380 ILE 381 THR 382 GLN 383 GLU 384 PHE 385 GLY 386 ILE 387 ASN 388 MET 389 MET 390 LEU 391 ILE 392 GLN 393 TYR 394 THR 395 ARG 396 ASN 397 GLU 398 LEU 399 LEU 400 ASP 401 SER 402 PRO 403 GLY 404 MET 405 CYS 406 VAL 407 PHE 408 TRP 409 GLY 410 PRO 411 TYR 412 SER 413 VAL 414 PRO 415 LYS 416 ASN 417 ASP 418 THR 419 VAL 420 VAL 421 LEU 422 TYR 423 THR 424 VAL 425 THR 426 ALA 427 ARG 428 LEU 429 LYS 430 TRP 431 SER 432 GLU 433 GLY 434 PRO 435 PRO 436 THR 437 ASN 438 LEU 439 SER 440 ILE 441 GLN 442 CYS 443 TYR 444 MET 445 PRO 446 LYS 447 SER 448
Unit 5	PHE 28 LEU 29 ASN 30 LYS 31 ALA 32 PHE 33 GLU 34 VAL 35 ALA 36 LEU 37 LYS 38 VAL 39 GLN 40 ILE 41 ILE 42 ALA 43 GLY 44 PHE 45 ASP 46 ARG 47 GLY 48 LEU 49 VAL 50 LYS 51 TRP 52 LEU 53 ARG 54 VAL 55 HIS 56 GLY 57 ARG 58 THR 59 LEU 60 SER 61 THR 62 VAL 63 GLN 64 LYS 65 LYS 66 ALA 67 LEU 68 TYR 69 PHE 70 VAL 71 ASN 72 ARG 73 ARG 74 TYR 75 MET 76 GLN 77 THR 78 HIS 79 TRP 80 ALA 81 ASN 82 TYR 83 MET 84 LEU 85 TRP 86 ILE 87 ASN 88 LYS 89 LYS 90 ILE 91 ASP 92 ALA 93 LEU 94 GLY 95 ARG 96 THR 97 PRO 98 VAL 99 VAL 100 GLY 101 ASP 102 TYR 103 THR 104 ARG 105 LEU 106 GLY 107 ALA 108 GLU 109 ILE 110 GLY 111 ARG 112 ARG 113 ILE 114 ASP 115 MET 116 ALA 117 TYR 118 PHE 119 TYR 120 ASP 121 PHE 122 LEU 123 LYS 124 ASP 125 LYS 126 ASN 127 MET 128 ILE 129 PRO 130 LYS 131 TYR 132 LEU 133 PRO 134 TYR 135 MET 136 GLU 137 GLU 138 ILE 139 ASN 140 ARG 141 MET 142 ARG 143 PRO 144 ALA 145 ASP 146 VAL 147 PRO 148 VAL 149 LYS 150 TYR 151 MET 152
Unit 6	ALA 339 ASP 340 TRP 341 ASP 342 VAL 343 TYR 344 CYS 345 SER 346 GLN 347 ASP 348 GLU 349 SER 350 ILE 351 PRO 352 ALA 353 LYS 354 PHE 355 ILE 356 SER 357 ARG 358 LEU 359 VAL 360 ALA 366 LEU 367 GLU 368 LYS 369 THR 370 GLU 371 ILE 372 ASN 373 CYS 374 SER 375 ASN 376 GLY 377 LEU 378 VAL 379 PRO 380 ILE 381 THR 382 GLN 383 GLU 384 PHE 385 GLY 386 ILE 387 ASN 388 MET 389 MET 390 LEU 391 ILE 392 GLN 393 TYR 394 THR 395 ARG 396 ASN 397 GLU 398 LEU 399 LEU 400 ASP 401 SER 402 PRO 403 GLY 404 MET 405 CYS 406 VAL 407 PHE 408 TRP 409 GLY 410 PRO 411 TYR 412 SER 413 VAL 414 PRO 415 LYS 416 ASN 417 ASP 418 THR 419 VAL 420 VAL 421 LEU 422 TYR 423 THR 424 VAL 425 THR 426 ALA 427 ARG 428 LEU 429 LYS 430 TRP 431 SER 432 GLU 433 GLY 434 PRO 435 PRO 436 THR 437 ASN 438 LEU 439 SER 440 ILE 441 GLN 442 CYS 443 TYR 444 MET 445 PRO 446 LYS 447 SER 448
Unit 7	LYS 27 PHE 28 LEU 29 ASN 30 LYS 31 ALA 32 PHE 33 GLU 34 VAL 35 ALA 36 LEU 37 LYS 38 VAL 39 GLN 40 ILE 41 ILE 42 ALA 43 GLY 44 PHE 45 ASP 46 ARG 47 GLY 48 LEU 49 VAL 50 LYS 51 TRP 52 LEU 53 ARG 54 VAL 55 HIS 56 GLY 57 ARG 58 THR 59 LEU 60 SER 61 THR 62 VAL 63 GLN 64 LYS 65 LYS 66 ALA 67 LEU 68 TYR 69 PHE 70 VAL 71 ASN 72 ARG 73 ARG 74 TYR 75 MET 76 GLN 77 THR 78 HIS 79 TRP 80 ALA 81 ASN 82 TYR 83 MET 84 LEU 85 TRP 86 ILE 87 ASN 88 LYS 89 LYS 90 ILE 91 ASP 92 ALA 93 LEU 94 GLY 95 ARG 96 THR 97 PRO 98 VAL 99 VAL 100 GLY 101 ASP 102 TYR 103 THR 104 ARG 105 LEU 106 GLY 107 ALA 108 GLU 109 ILE 110 GLY 111 ARG 112 ARG 113 ILE 114 ASP 115 MET 116 ALA 117 TYR 118 PHE 119 TYR 120 ASP 121 PHE 122 LEU 123 LYS 124 ASP 125 LYS 126 ASN 127 MET 128 ILE 129 PRO 130 LYS 131 TYR 132 LEU 133 PRO 134 TYR 135 MET 136 GLU 137 GLU 138 ILE 139 ASN 140 ARG 141 MET 142 ARG 143 PRO 144 ALA 145 ASP 146 VAL 147 PRO 148 VAL 149 LYS 150 TYR 151 MET 152
Unit 8	ASP 340 TRP 341 ASP 342 VAL 343 TYR 344 CYS 345 SER 346 GLN 347 ASP 348 GLU 349 SER 350 ILE 351 PRO 352 ALA 353 LYS 354 PHE 355 ILE 356 SER 357 ARG 358 LEU 359 ALA 366 LEU 367 GLU 368 LYS 369 THR 370 GLU 371 ILE 372 ASN 373 CYS 374 SER 375 ASN 376 GLY 377 LEU 378 VAL 379 PRO 380 ILE 381 THR 382 GLN 383 GLU 384 PHE 385 GLY 386 ILE 387 ASN 388 MET 389 MET 390 LEU 391 ILE 392 GLN 393 TYR 394 THR 395 ARG 396 ASN 397 GLU 398 LEU 399 LEU 400 ASP 401 SER 402 PRO 403 GLY 404 MET 405 CYS 406 VAL 407 PHE 408 TRP 409 GLY 410 PRO 411 TYR 412 SER 413 VAL 414 PRO 415 LYS 416 ASN 417 ASP 418 THR 419 VAL 420 VAL 421 LEU 422 TYR 423 THR 424 VAL 425 THR 426 ALA 427 ARG 428 LEU 429 LYS 430 TRP 431 SER 432 GLU 433 GLY 434 PRO 435 PRO 436 THR 437 ASN 438 LEU 439 SER 440 ILE 441 GLN 442 CYS 443 TYR 444 MET 445 PRO 446 LYS 447

Ligands

Unit 9	NAG 501 NAG 502
Unit 10	NAG 501 NAG 502
Unit 11	NAG 501 NAG 502
Unit 12	NAG 501 NAG 502