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Sequence, Chains, Asymmetric and Biological Units

Title S. CEREVISIAE PRP43 IN COMPLEX WITH RNA AND ADPNP
Keywords HELICASE, RNA, UNWINDING, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5I8Q     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 752 6049 0
2  Protein    B 752 6049 0
3  RNA    C 9 177 0
4  RNA    F 13 257 0
5  Ligand    A 2 0 32
6  Ligand    B 2 0 32
total       1530 12532 64
Proteins
Unit 1 LYS4 ARG5 ARG6 PHE7 SER8 SER9 GLU10 HIS11 PRO12 ASP13 PRO14 VAL15 GLU16 THR17 SER18 ILE19 PRO20 GLU21 GLN22 ALA23 ALA24 GLU25 ILE26 ALA27 GLU28 GLU29 LEU30 SER31 LYS32 GLN33 HIS34 PRO35 LEU36 PRO37 SER38 GLU39 GLU40 PRO41 LEU42 VAL43 HIS44 HIS45 ASP46 ALA47 GLY48 GLU49 PHE50 LYS51 GLY52 LEU53 GLN54 ARG55 HIS56 HIS57 THR58 SER59 ALA60 GLU61 GLU62 ALA63 GLN64 LYS65 LEU66 GLU67 ASP68 GLY69 LYS70 ILE71 ASN72 PRO73 PHE74 THR75 GLY76 ARG77 GLU78 PHE79 THR80 PRO81 LYS82 TYR83 VAL84 ASP85 ILE86 LEU87 LYS88 ILE89 ARG90 ARG91 GLU92 LEU93 PRO94 VAL95 HIS96 ALA97 GLN98 ARG99 ASP100 GLU101 PHE102 LEU103 LYS104 LEU105 TYR106 GLN107 ASN108 ASN109 GLN110 ILE111 MET112 VAL113 PHE114 VAL115 GLY116 GLU117 THR118 GLY119 SER120 GLY121 LYS122 THR123 THR124 GLN125 ILE126 PRO127 GLN128 PHE129 VAL130 LEU131 PHE132 ASP133 GLU134 MET135 PRO136 HIS137 LEU138 GLU139 ASN140 THR141 GLN142 VAL143 ALA144 CYS145 THR146 GLN147 PRO148 ARG149 ARG150 VAL151 ALA152 ALA153 MET154 SER155 VAL156 ALA157 GLN158 ARG159 VAL160 ALA161 GLU162 GLU163 MET164 ASP165 VAL166 LYS167 LEU168 GLY169 GLU170 GLU171 VAL172 GLY173 TYR174 SER175 ILE176 ARG177 PHE178 GLU179 ASN180 LYS181 THR182 SER183 ASN184 LYS185 THR186 ILE187 LEU188 LYS189 TYR190 MET191 THR192 ASP193 GLY194 MET195 LEU196 LEU197 ARG198 GLU199 ALA200 MET201 GLU202 ASP203 HIS204 ASP205 LEU206 SER207 ARG208 TYR209 SER210 CYS211 ILE212 ILE213 LEU214 ASP215 GLU216 ALA217 HIS218 GLU219 ARG220 THR221 LEU222 ALA223 THR224 ASP225 ILE226 LEU227 MET228 GLY229 LEU230 LEU231 LYS232 GLN233 VAL234 VAL235 LYS236 ARG237 ARG238 PRO239 ASP240 LEU241 LYS242 ILE243 ILE244 ILE245 MET246 SER247 ALA248 THR249 LEU250 ASP251 ALA252 GLU253 LYS254 PHE255 GLN256 ARG257 TYR258 PHE259 ASN260 ASP261 ALA262 PRO263 LEU264 LEU265 ALA266 VAL267 PRO268 GLY269 ARG270 THR271 TYR272 PRO273 VAL274 GLU275 LEU276 TYR277 TYR278 THR279 PRO280 GLU281 PHE282 GLN283 ARG284 ASP285 TYR286 LEU287 ASP288 SER289 ALA290 ILE291 ARG292 THR293 VAL294 LEU295 GLN296 ILE297 HIS298 ALA299 THR300 GLU301 GLU302 ALA303 GLY304 ASP305 ILE306 LEU307 LEU308 PHE309 LEU310 THR311 GLY312 GLU313 ASP314 GLU315 ILE316 GLU317 ASP318 ALA319 VAL320 ARG321 LYS322 ILE323 SER324 LEU325 GLU326 GLY327 ASP328 GLN329 LEU330 VAL331 ARG332 GLU333 GLU334 GLY335 CYS336 GLY337 PRO338 LEU339 SER340 VAL341 TYR342 PRO343 LEU344 TYR345 GLY346 SER347 LEU348 PRO349 PRO350 HIS351 GLN352 GLN353 GLN354 ARG355 ILE356 PHE357 GLU358 PRO359 ALA360 PRO361 GLU362 SER363 HIS364 ASN365 GLY366 ARG367 PRO368 GLY369 ARG370 LYS371 VAL372 VAL373 ILE374 SER375 THR376 ASN377 ILE378 ALA379 GLU380 THR381 SER382 LEU383 THR384 ILE385 ASP386 GLY387 ILE388 VAL389 TYR390 VAL391 VAL392 ASP393 PRO394 GLY395 PHE396 SER397 LYS398 GLN399 LYS400 VAL401 TYR402 ASN403 PRO404 ARG405 ILE406 ARG407 VAL408 GLU409 SER410 LEU411 LEU412 VAL413 SER414 PRO415 ILE416 SER417 LYS418 ALA419 SER420 ALA421 GLN422 GLN423 ARG424 ALA425 GLY426 ARG427 ALA428 GLY429 ARG430 THR431 ARG432 PRO433 GLY434 LYS435 CYS436 PHE437 ARG438 LEU439 TYR440 THR441 GLU442 GLU443 ALA444 PHE445 GLN446 LYS447 GLU448 LEU449 ILE450 GLU451 GLN452 SER453 TYR454 PRO455 GLU456 ILE457 LEU458 ARG459 SER460 ASN461 LEU462 SER463 SER464 THR465 VAL466 LEU467 GLU468 LEU469 LYS470 LYS471 LEU472 GLY473 ILE474 ASP475 ASP476 LEU477 VAL478 HIS479 PHE480 ASP481 PHE482 MET483 ASP484 PRO485 PRO486 ALA487 PRO488 GLU489 THR490 MET491 MET492 ARG493 ALA494 LEU495 GLU496 GLU497 LEU498 ASN499 TYR500 LEU501 ALA502 CYS503 LEU504 ASP505 ASP506 GLU507 GLY508 ASN509 LEU510 THR511 PRO512 LEU513 GLY514 ARG515 LEU516 ALA517 SER518 GLN519 PHE520 PRO521 LEU522 ASP523 PRO524 MET525 LEU526 ALA527 VAL528 MET529 LEU530 ILE531 GLY532 SER533 PHE534 GLU535 PHE536 GLN537 CYS538 SER539 GLN540 GLU541 ILE542 LEU543 THR544 ILE545 VAL546 ALA547 MET548 LEU549 SER550 VAL551 PRO552 ASN553 VAL554 PHE555 ILE556 ARG557 PRO558 THR559 LYS560 ASP561 LYS562 LYS563 ARG564 ALA565 ASP566 ASP567 ALA568 LYS569 ASN570 ILE571 PHE572 ALA573 HIS574 PRO575 ASP576 GLY577 ASP578 HIS579 ILE580 THR581 LEU582 LEU583 ASN584 VAL585 TYR586 HIS587 ALA588 PHE589 LYS590 SER591 ASP592 GLU593 ALA594 TYR595 GLU596 TYR597 GLY598 ILE599 HIS600 LYS601 TRP602 CYS603 ARG604 ASP605 HIS606 TYR607 LEU608 ASN609 TYR610 ARG611 SER612 LEU613 SER614 ALA615 ALA616 ASP617 ASN618 ILE619 ARG620 SER621 GLN622 LEU623 GLU624 ARG625 LEU626 MET627 ASN628 ARG629 TYR630 ASN631 LEU632 GLU633 LEU634 ASN635 THR636 THR637 ASP638 TYR639 GLU640 SER641 PRO642 LYS643 TYR644 PHE645 ASP646 ASN647 ILE648 ARG649 LYS650 ALA651 LEU652 ALA653 SER654 GLY655 PHE656 PHE657 MET658 GLN659 VAL660 ALA661 LYS662 LYS663 ARG664 SER665 GLY666 ALA667 LYS668 GLY669 TYR670 ILE671 THR672 VAL673 LYS674 ASP675 ASN676 GLN677 ASP678 VAL679 LEU680 ILE681 HIS682 PRO683 SER684 THR685 VAL686 LEU687 GLY688 HIS689 ASP690 ALA691 GLU692 TRP693 VAL694 ILE695 TYR696 ASN697 GLU698 PHE699 VAL700 LEU701 THR702 SER703 LYS704 ASN705 TYR706 ILE707 ARG708 THR709 VAL710 THR711 SER712 VAL713 ARG714 PRO715 GLU716 TRP717 LEU718 ILE719 GLU720 ILE721 ALA722 PRO723 ALA724 TYR725 TYR726 ASP727 LEU728 SER729 ASN730 PHE731 GLN732 LYS733 GLY734 ASP735 VAL736 LYS737 LEU738 SER739 LEU740 GLU741 ARG742 ILE743 LYS744 GLU745 LYS746 VAL747 ASP748 ARG749 LEU750 ASN751 GLU752 LEU753 LYS754 GLN755
Unit 2 LYS4 ARG5 ARG6 PHE7 SER8 SER9 GLU10 HIS11 PRO12 ASP13 PRO14 VAL15 GLU16 THR17 SER18 ILE19 PRO20 GLU21 GLN22 ALA23 ALA24 GLU25 ILE26 ALA27 GLU28 GLU29 LEU30 SER31 LYS32 GLN33 HIS34 PRO35 LEU36 PRO37 SER38 GLU39 GLU40 PRO41 LEU42 VAL43 HIS44 HIS45 ASP46 ALA47 GLY48 GLU49 PHE50 LYS51 GLY52 LEU53 GLN54 ARG55 HIS56 HIS57 THR58 SER59 ALA60 GLU61 GLU62 ALA63 GLN64 LYS65 LEU66 GLU67 ASP68 GLY69 LYS70 ILE71 ASN72 PRO73 PHE74 THR75 GLY76 ARG77 GLU78 PHE79 THR80 PRO81 LYS82 TYR83 VAL84 ASP85 ILE86 LEU87 LYS88 ILE89 ARG90 ARG91 GLU92 LEU93 PRO94 VAL95 HIS96 ALA97 GLN98 ARG99 ASP100 GLU101 PHE102 LEU103 LYS104 LEU105 TYR106 GLN107 ASN108 ASN109 GLN110 ILE111 MET112 VAL113 PHE114 VAL115 GLY116 GLU117 THR118 GLY119 SER120 GLY121 LYS122 THR123 THR124 GLN125 ILE126 PRO127 GLN128 PHE129 VAL130 LEU131 PHE132 ASP133 GLU134 MET135 PRO136 HIS137 LEU138 GLU139 ASN140 THR141 GLN142 VAL143 ALA144 CYS145 THR146 GLN147 PRO148 ARG149 ARG150 VAL151 ALA152 ALA153 MET154 SER155 VAL156 ALA157 GLN158 ARG159 VAL160 ALA161 GLU162 GLU163 MET164 ASP165 VAL166 LYS167 LEU168 GLY169 GLU170 GLU171 VAL172 GLY173 TYR174 SER175 ILE176 ARG177 PHE178 GLU179 ASN180 LYS181 THR182 SER183 ASN184 LYS185 THR186 ILE187 LEU188 LYS189 TYR190 MET191 THR192 ASP193 GLY194 MET195 LEU196 LEU197 ARG198 GLU199 ALA200 MET201 GLU202 ASP203 HIS204 ASP205 LEU206 SER207 ARG208 TYR209 SER210 CYS211 ILE212 ILE213 LEU214 ASP215 GLU216 ALA217 HIS218 GLU219 ARG220 THR221 LEU222 ALA223 THR224 ASP225 ILE226 LEU227 MET228 GLY229 LEU230 LEU231 LYS232 GLN233 VAL234 VAL235 LYS236 ARG237 ARG238 PRO239 ASP240 LEU241 LYS242 ILE243 ILE244 ILE245 MET246 SER247 ALA248 THR249 LEU250 ASP251 ALA252 GLU253 LYS254 PHE255 GLN256 ARG257 TYR258 PHE259 ASN260 ASP261 ALA262 PRO263 LEU264 LEU265 ALA266 VAL267 PRO268 GLY269 ARG270 THR271 TYR272 PRO273 VAL274 GLU275 LEU276 TYR277 TYR278 THR279 PRO280 GLU281 PHE282 GLN283 ARG284 ASP285 TYR286 LEU287 ASP288 SER289 ALA290 ILE291 ARG292 THR293 VAL294 LEU295 GLN296 ILE297 HIS298 ALA299 THR300 GLU301 GLU302 ALA303 GLY304 ASP305 ILE306 LEU307 LEU308 PHE309 LEU310 THR311 GLY312 GLU313 ASP314 GLU315 ILE316 GLU317 ASP318 ALA319 VAL320 ARG321 LYS322 ILE323 SER324 LEU325 GLU326 GLY327 ASP328 GLN329 LEU330 VAL331 ARG332 GLU333 GLU334 GLY335 CYS336 GLY337 PRO338 LEU339 SER340 VAL341 TYR342 PRO343 LEU344 TYR345 GLY346 SER347 LEU348 PRO349 PRO350 HIS351 GLN352 GLN353 GLN354 ARG355 ILE356 PHE357 GLU358 PRO359 ALA360 PRO361 GLU362 SER363 HIS364 ASN365 GLY366 ARG367 PRO368 GLY369 ARG370 LYS371 VAL372 VAL373 ILE374 SER375 THR376 ASN377 ILE378 ALA379 GLU380 THR381 SER382 LEU383 THR384 ILE385 ASP386 GLY387 ILE388 VAL389 TYR390 VAL391 VAL392 ASP393 PRO394 GLY395 PHE396 SER397 LYS398 GLN399 LYS400 VAL401 TYR402 ASN403 PRO404 ARG405 ILE406 ARG407 VAL408 GLU409 SER410 LEU411 LEU412 VAL413 SER414 PRO415 ILE416 SER417 LYS418 ALA419 SER420 ALA421 GLN422 GLN423 ARG424 ALA425 GLY426 ARG427 ALA428 GLY429 ARG430 THR431 ARG432 PRO433 GLY434 LYS435 CYS436 PHE437 ARG438 LEU439 TYR440 THR441 GLU442 GLU443 ALA444 PHE445 GLN446 LYS447 GLU448 LEU449 ILE450 GLU451 GLN452 SER453 TYR454 PRO455 GLU456 ILE457 LEU458 ARG459 SER460 ASN461 LEU462 SER463 SER464 THR465 VAL466 LEU467 GLU468 LEU469 LYS470 LYS471 LEU472 GLY473 ILE474 ASP475 ASP476 LEU477 VAL478 HIS479 PHE480 ASP481 PHE482 MET483 ASP484 PRO485 PRO486 ALA487 PRO488 GLU489 THR490 MET491 MET492 ARG493 ALA494 LEU495 GLU496 GLU497 LEU498 ASN499 TYR500 LEU501 ALA502 CYS503 LEU504 ASP505 ASP506 GLU507 GLY508 ASN509 LEU510 THR511 PRO512 LEU513 GLY514 ARG515 LEU516 ALA517 SER518 GLN519 PHE520 PRO521 LEU522 ASP523 PRO524 MET525 LEU526 ALA527 VAL528 MET529 LEU530 ILE531 GLY532 SER533 PHE534 GLU535 PHE536 GLN537 CYS538 SER539 GLN540 GLU541 ILE542 LEU543 THR544 ILE545 VAL546 ALA547 MET548 LEU549 SER550 VAL551 PRO552 ASN553 VAL554 PHE555 ILE556 ARG557 PRO558 THR559 LYS560 ASP561 LYS562 LYS563 ARG564 ALA565 ASP566 ASP567 ALA568 LYS569 ASN570 ILE571 PHE572 ALA573 HIS574 PRO575 ASP576 GLY577 ASP578 HIS579 ILE580 THR581 LEU582 LEU583 ASN584 VAL585 TYR586 HIS587 ALA588 PHE589 LYS590 SER591 ASP592 GLU593 ALA594 TYR595 GLU596 TYR597 GLY598 ILE599 HIS600 LYS601 TRP602 CYS603 ARG604 ASP605 HIS606 TYR607 LEU608 ASN609 TYR610 ARG611 SER612 LEU613 SER614 ALA615 ALA616 ASP617 ASN618 ILE619 ARG620 SER621 GLN622 LEU623 GLU624 ARG625 LEU626 MET627 ASN628 ARG629 TYR630 ASN631 LEU632 GLU633 LEU634 ASN635 THR636 THR637 ASP638 TYR639 GLU640 SER641 PRO642 LYS643 TYR644 PHE645 ASP646 ASN647 ILE648 ARG649 LYS650 ALA651 LEU652 ALA653 SER654 GLY655 PHE656 PHE657 MET658 GLN659 VAL660 ALA661 LYS662 LYS663 ARG664 SER665 GLY666 ALA667 LYS668 GLY669 TYR670 ILE671 THR672 VAL673 LYS674 ASP675 ASN676 GLN677 ASP678 VAL679 LEU680 ILE681 HIS682 PRO683 SER684 THR685 VAL686 LEU687 GLY688 HIS689 ASP690 ALA691 GLU692 TRP693 VAL694 ILE695 TYR696 ASN697 GLU698 PHE699 VAL700 LEU701 THR702 SER703 LYS704 ASN705 TYR706 ILE707 ARG708 THR709 VAL710 THR711 SER712 VAL713 ARG714 PRO715 GLU716 TRP717 LEU718 ILE719 GLU720 ILE721 ALA722 PRO723 ALA724 TYR725 TYR726 ASP727 LEU728 SER729 ASN730 PHE731 GLN732 LYS733 GLY734 ASP735 VAL736 LYS737 LEU738 SER739 LEU740 GLU741 ARG742 ILE743 LYS744 GLU745 LYS746 VAL747 ASP748 ARG749 LEU750 ASN751 GLU752 LEU753 LYS754 GLN755
Nucleic acids
Unit 3 U1 U2 U3 U4 U5 U6 U7 U8 U9
Unit 4 U1 U2 U3 U4 U5 U6 U7 U8 U9 U10 U11 U12 U13
Ligands
Unit 5 MG801 ANP802
Unit 6 MG801 ANP802
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany