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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV1-69/IGKV3-
Keywords MONOCLONAL ANTIBODY, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5I17     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FAB LIGHT CHAIN  L 213 1628 0
2  Protein   FAB HEAVY CHAIN  H 213 1568 5
3  Protein   FAB LIGHT CHAIN  A 214 1633 0
4  Protein   FAB HEAVY CHAIN  B 216 1551 8
5  Ligand   FAB LIGHT CHAIN  A 1 0 5
total       857 6380 18

Proteins
Unit 1 GLU1 ILE2 VAL3 LEU4 THR5 GLN6 SER7 PRO8 GLY9 THR10 LEU11 SER12 LEU13 SER14 PRO15 GLY16 GLU17 ARG18 ALA19 THR20 LEU21 SER22 CYS23 ARG24 ALA25 SER26 GLN27 SER28 VAL29 SER30 SER31 SER32 TYR33 LEU34 ALA35 TRP36 TYR37 GLN38 GLN39 LYS40 PRO41 GLY42 GLN43 ALA44 PRO45 ARG46 LEU47 LEU48 ILE49 TYR50 GLY51 ALA52 SER53 SER54 ARG55 ALA56 THR57 GLY58 ILE59 PRO60 ASP61 ARG62 PHE63 SER64 GLY65 SER66 GLY67 SER68 GLY69 THR70 ASP71 PHE72 THR73 LEU74 THR75 ILE76 SER77 ARG78 LEU79 GLU80 PRO81 GLU82 ASP83 PHE84 ALA85 VAL86 TYR87 TYR88 CYS89 GLN90 GLN91 TYR92 GLY93 SER94 SER95 PRO96 LEU97 THR98 PHE99 GLY100 GLN101 GLY102 THR103 LYS104 VAL105 GLU106 ILE107 LYS108 ARG109 THR110 VAL111 ALA112 ALA113 PRO114 SER115 VAL116 PHE117 ILE118 PHE119 PRO120 PRO121 SER122 ASP123 GLU124 GLN125 LEU126 LYS127 SER128 GLY129 THR130 ALA131 SER132 VAL133 VAL134 CYS135 LEU136 LEU137 ASN138 ASN139 PHE140 TYR141 PRO142 ARG143 GLU144 ALA145 LYS146 VAL147 GLN148 TRP149 LYS150 VAL151 ASP152 ASN153 ALA154 LEU155 GLN156 SER157 GLY158 ASN159 SER160 GLN161 GLU162 SER163 VAL164 THR165 GLU166 GLN167 ASP168 SER169 LYS170 ASP171 SER172 THR173 TYR174 SER175 LEU176 SER177 SER178 THR179 LEU180 THR181 LEU182 SER183 LYS184 ALA185 ASP186 TYR187 GLU188 LYS189 HIS190 LYS191 VAL192 TYR193 ALA194 CYS195 GLU196 VAL197 THR198 HIS199 GLN200 GLY201 LEU202 SER203 SER204 PRO205 VAL206 THR207 LYS208 SER209 PHE210 ASN211 ARG212 GLY213
Unit 2 PCA1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 GLY27 THR28 PHE29 SER30 SER31 TYR32 ALA33 ILE34 SER35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 GLY50 ILE51 ILE52 PRO53 ILE54 PHE55 GLY56 THR57 ALA58 ASN59 TYR60 ALA61 GLN62 LYS63 PHE64 GLN65 GLY66 ARG67 VAL68 THR69 ILE70 THR71 ALA72 ASP73 GLU74 SER75 THR76 SER77 THR78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 SER88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 TYR99 ASP100 GLY101 ILE102 TYR103 GLY104 GLU105 LEU106 ASP107 PHE108 TRP109 GLY110 GLN111 GLY112 THR113 LEU114 VAL115 THR116 VAL117 SER118 SER119 ALA120 SER121 THR122 LYS123 GLY124 PRO125 SER126 VAL127 PHE128 PRO129 LEU130 ALA131 PRO132 SER133 THR141 ALA142 ALA143 LEU144 GLY145 CYS146 LEU147 VAL148 LYS149 ASP150 TYR151 PHE152 PRO153 GLU154 PRO155 VAL156 THR157 VAL158 SER159 TRP160 ASN161 SER162 GLY163 ALA164 LEU165 THR166 SER167 GLY168 VAL169 HIS170 THR171 PHE172 PRO173 ALA174 VAL175 LEU176 GLN177 SER178 SER179 GLY180 LEU181 TYR182 SER183 LEU184 SER185 SER186 VAL187 VAL188 THR189 VAL190 PRO191 SER192 SER193 SER194 LEU195 GLY196 THR197 GLN198 THR199 TYR200 ILE201 CYS202 ASN203 VAL204 ASN205 HIS206 LYS207 PRO208 SER209 ASN210 THR211 LYS212 VAL213 ASP214 LYS215 LYS216 VAL217 GLU218 PRO219 LYS220
Unit 3 GLU1 ILE2 VAL3 LEU4 THR5 GLN6 SER7 PRO8 GLY9 THR10 LEU11 SER12 LEU13 SER14 PRO15 GLY16 GLU17 ARG18 ALA19 THR20 LEU21 SER22 CYS23 ARG24 ALA25 SER26 GLN27 SER28 VAL29 SER30 SER31 SER32 TYR33 LEU34 ALA35 TRP36 TYR37 GLN38 GLN39 LYS40 PRO41 GLY42 GLN43 ALA44 PRO45 ARG46 LEU47 LEU48 ILE49 TYR50 GLY51 ALA52 SER53 SER54 ARG55 ALA56 THR57 GLY58 ILE59 PRO60 ASP61 ARG62 PHE63 SER64 GLY65 SER66 GLY67 SER68 GLY69 THR70 ASP71 PHE72 THR73 LEU74 THR75 ILE76 SER77 ARG78 LEU79 GLU80 PRO81 GLU82 ASP83 PHE84 ALA85 VAL86 TYR87 TYR88 CYS89 GLN90 GLN91 TYR92 GLY93 SER94 SER95 PRO96 LEU97 THR98 PHE99 GLY100 GLN101 GLY102 THR103 LYS104 VAL105 GLU106 ILE107 LYS108 ARG109 THR110 VAL111 ALA112 ALA113 PRO114 SER115 VAL116 PHE117 ILE118 PHE119 PRO120 PRO121 SER122 ASP123 GLU124 GLN125 LEU126 LYS127 SER128 GLY129 THR130 ALA131 SER132 VAL133 VAL134 CYS135 LEU136 LEU137 ASN138 ASN139 PHE140 TYR141 PRO142 ARG143 GLU144 ALA145 LYS146 VAL147 GLN148 TRP149 LYS150 VAL151 ASP152 ASN153 ALA154 LEU155 GLN156 SER157 GLY158 ASN159 SER160 GLN161 GLU162 SER163 VAL164 THR165 GLU166 GLN167 ASP168 SER169 LYS170 ASP171 SER172 THR173 TYR174 SER175 LEU176 SER177 SER178 THR179 LEU180 THR181 LEU182 SER183 LYS184 ALA185 ASP186 TYR187 GLU188 LYS189 HIS190 LYS191 VAL192 TYR193 ALA194 CYS195 GLU196 VAL197 THR198 HIS199 GLN200 GLY201 LEU202 SER203 SER204 PRO205 VAL206 THR207 LYS208 SER209 PHE210 ASN211 ARG212 GLY213 GLU214
Unit 4 PCA1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 GLY27 THR28 PHE29 SER30 SER31 TYR32 ALA33 ILE34 SER35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 GLY50 ILE51 ILE52 PRO53 ILE54 PHE55 GLN62 LYS63 PHE64 GLN65 GLY66 ARG67 VAL68 THR69 ILE70 THR71 ALA72 ASP73 GLU74 SER75 THR76 SER77 THR78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 SER88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 TYR99 ASP100 GLY101 ILE102 TYR103 GLY104 GLU105 LEU106 ASP107 PHE108 TRP109 GLY110 GLN111 GLY112 THR113 LEU114 VAL115 THR116 VAL117 SER118 SER119 ALA120 SER121 THR122 LYS123 GLY124 PRO125 SER126 VAL127 PHE128 PRO129 LEU130 ALA131 PRO132 SER133 SER134 LYS135 SER136 THR137 SER138 GLY139 GLY140 THR141 ALA142 ALA143 LEU144 GLY145 CYS146 LEU147 VAL148 LYS149 ASP150 TYR151 PHE152 PRO153 GLU154 PRO155 VAL156 THR157 VAL158 SER159 TRP160 ASN161 SER162 GLY163 ALA164 LEU165 THR166 SER167 GLY168 VAL169 HIS170 THR171 PHE172 PRO173 ALA174 VAL175 LEU176 GLN177 SER178 SER179 GLY180 LEU181 TYR182 SER183 LEU184 SER185 SER186 VAL187 VAL188 THR189 VAL190 PRO191 SER192 SER193 SER194 LEU195 GLY196 THR197 GLN198 THR199 TYR200 ILE201 CYS202 ASN203 VAL204 ASN205 HIS206 LYS207 PRO208 SER209 ASN210 THR211 LYS212 VAL213 ASP214 LYS215 LYS216 VAL217 GLU218 PRO219 LYS220 SER221 CYS222

Ligands
Unit 5 SO4901

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany