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Sequence, Chains, Asymmetric and Biological Units

Title CETUXIMAB FAB IN COMPLEX WITH CYCLIC LINKED MEDITOPE
Keywords ANTIBODY, ANTI-EGFR, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5HPM     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CETUXIMAB FAB LIGHT CHAIN  A 213 1635 0
2  Protein   CETUXIMAB FAB HEAVY CHAIN  B 216 1634 0
3  Protein   CETUXIMAB FAB LIGHT CHAIN  C 213 1635 0
4  Protein   CETUXIMAB FAB HEAVY CHAIN  D 214 1624 0
5  Protein   CYCLIC AMIDATED, ACETYLATED LINKED MEDITOPE  E 11 88 9
6  Protein   CYCLIC AMIDATED, ACETYLATED LINKED MEDITOPE  F 11 88 9
7  Ligand   CETUXIMAB FAB HEAVY CHAIN  B 1 0 14
8  Ligand   CETUXIMAB FAB HEAVY CHAIN  D 1 0 14
9  Ligand   CYCLIC AMIDATED, ACETYLATED LINKED MEDITOPE  E 1 0 7
10  Ligand   CYCLIC AMIDATED, ACETYLATED LINKED MEDITOPE  F 1 0 7
11 Water     279 0 279
total       1161 6704 339

Proteins
Unit 1 ASP1 ILE2 LEU3 LEU4 THR5 GLN6 SER7 PRO8 VAL9 ILE10 LEU11 SER12 VAL13 SER14 PRO15 GLY16 GLU17 ARG18 VAL19 SER20 PHE21 SER22 CYS23 ARG24 ALA25 SER26 GLN27 SER28 ILE29 GLY30 THR31 ASN32 ILE33 HIS34 TRP35 TYR36 GLN37 GLN38 ARG39 THR40 ASN41 GLY42 SER43 PRO44 ARG45 LEU46 LEU47 ILE48 LYS49 TYR50 ALA51 SER52 GLU53 SER54 ILE55 SER56 GLY57 ILE58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 LEU73 SER74 ILE75 ASN76 SER77 VAL78 GLU79 SER80 GLU81 ASP82 ILE83 ALA84 ASP85 TYR86 TYR87 CYS88 GLN89 GLN90 ASN91 ASN92 ASN93 TRP94 PRO95 THR96 THR97 PHE98 GLY99 ALA100 GLY101 THR102 LYS103 LEU104 GLU105 LEU106 LYS107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211 GLY212 ALA213
Unit 2 GLN1 VAL2 GLN3 LEU4 LYS5 GLN6 SER7 GLY8 PRO9 GLY10 LEU11 VAL12 GLN13 PRO14 SER15 GLN16 SER17 LEU18 SER19 ILE20 THR21 CYS22 THR23 VAL24 SER25 GLY26 PHE27 SER28 LEU29 THR30 ASN31 TYR32 GLY33 VAL34 HIS35 TRP36 VAL37 ARG38 GLN39 SER40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 LEU48 GLY49 VAL50 ILE51 TRP52 SER53 GLY54 GLY55 ASN56 THR57 ASP58 TYR59 ASN60 THR61 PRO62 PHE63 THR64 SER65 ARG66 LEU67 SER68 ILE69 ASN70 LYS71 ASP72 ASN73 SER74 LYS75 SER76 GLN77 VAL78 PHE79 PHE80 LYS81 MET82 ASN83 SER84 LEU85 GLN86 SER87 ASN88 ASP89 THR90 ALA91 ILE92 TYR93 TYR94 CYS95 ALA96 ARG97 ALA98 LEU99 THR100 TYR101 TYR102 ASP103 TYR104 GLU105 PHE106 ALA107 TYR108 TRP109 GLY110 GLN111 GLY112 THR113 LEU114 VAL115 THR116 VAL117 SER118 ALA119 ALA120 SER121 THR122 LYS123 GLY124 PRO125 SER126 VAL127 PHE128 PRO129 LEU130 ALA131 PRO132 SER133 SER138 GLY139 GLY140 THR141 ALA142 ALA143 LEU144 GLY145 CYS146 LEU147 VAL148 LYS149 ASP150 TYR151 PHE152 PRO153 GLU154 PRO155 VAL156 THR157 VAL158 SER159 TRP160 ASN161 SER162 GLY163 ALA164 LEU165 THR166 SER167 GLY168 VAL169 HIS170 THR171 PHE172 PRO173 ALA174 VAL175 LEU176 GLN177 SER178 SER179 GLY180 LEU181 TYR182 SER183 LEU184 SER185 SER186 VAL187 VAL188 THR189 VAL190 PRO191 SER192 SER193 SER194 LEU195 GLY196 THR197 GLN198 THR199 TYR200 ILE201 CYS202 ASN203 VAL204 ASN205 HIS206 LYS207 PRO208 SER209 ASN210 THR211 LYS212 VAL213 ASP214 LYS215 ARG216 VAL217 GLU218 PRO219 LYS220
Unit 3 ASP1 ILE2 LEU3 LEU4 THR5 GLN6 SER7 PRO8 VAL9 ILE10 LEU11 SER12 VAL13 SER14 PRO15 GLY16 GLU17 ARG18 VAL19 SER20 PHE21 SER22 CYS23 ARG24 ALA25 SER26 GLN27 SER28 ILE29 GLY30 THR31 ASN32 ILE33 HIS34 TRP35 TYR36 GLN37 GLN38 ARG39 THR40 ASN41 GLY42 SER43 PRO44 ARG45 LEU46 LEU47 ILE48 LYS49 TYR50 ALA51 SER52 GLU53 SER54 ILE55 SER56 GLY57 ILE58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 LEU73 SER74 ILE75 ASN76 SER77 VAL78 GLU79 SER80 GLU81 ASP82 ILE83 ALA84 ASP85 TYR86 TYR87 CYS88 GLN89 GLN90 ASN91 ASN92 ASN93 TRP94 PRO95 THR96 THR97 PHE98 GLY99 ALA100 GLY101 THR102 LYS103 LEU104 GLU105 LEU106 LYS107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211 GLY212 ALA213
Unit 4 GLN1 VAL2 GLN3 LEU4 LYS5 GLN6 SER7 GLY8 PRO9 GLY10 LEU11 VAL12 GLN13 PRO14 SER15 GLN16 SER17 LEU18 SER19 ILE20 THR21 CYS22 THR23 VAL24 SER25 GLY26 PHE27 SER28 LEU29 THR30 ASN31 TYR32 GLY33 VAL34 HIS35 TRP36 VAL37 ARG38 GLN39 SER40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 LEU48 GLY49 VAL50 ILE51 TRP52 SER53 GLY54 GLY55 ASN56 THR57 ASP58 TYR59 ASN60 THR61 PRO62 PHE63 THR64 SER65 ARG66 LEU67 SER68 ILE69 ASN70 LYS71 ASP72 ASN73 SER74 LYS75 SER76 GLN77 VAL78 PHE79 PHE80 LYS81 MET82 ASN83 SER84 LEU85 GLN86 SER87 ASN88 ASP89 THR90 ALA91 ILE92 TYR93 TYR94 CYS95 ALA96 ARG97 ALA98 LEU99 THR100 TYR101 TYR102 ASP103 TYR104 GLU105 PHE106 ALA107 TYR108 TRP109 GLY110 GLN111 GLY112 THR113 LEU114 VAL115 THR116 VAL117 SER118 ALA119 ALA120 SER121 THR122 LYS123 GLY124 PRO125 SER126 VAL127 PHE128 PRO129 LEU130 ALA131 PRO132 SER133 GLY140 THR141 ALA142 ALA143 LEU144 GLY145 CYS146 LEU147 VAL148 LYS149 ASP150 TYR151 PHE152 PRO153 GLU154 PRO155 VAL156 THR157 VAL158 SER159 TRP160 ASN161 SER162 GLY163 ALA164 LEU165 THR166 SER167 GLY168 VAL169 HIS170 THR171 PHE172 PRO173 ALA174 VAL175 LEU176 GLN177 SER178 SER179 GLY180 LEU181 TYR182 SER183 LEU184 SER185 SER186 VAL187 VAL188 THR189 VAL190 PRO191 SER192 SER193 SER194 LEU195 GLY196 THR197 GLN198 THR199 TYR200 ILE201 CYS202 ASN203 VAL204 ASN205 HIS206 LYS207 PRO208 SER209 ASN210 THR211 LYS212 VAL213 ASP214 LYS215 ARG216 VAL217 GLU218 PRO219 LYS220
Unit 5 SC21 GLN2 PHE3 ASP4 LEU5 SER6 THR7 ARG8 ARG9 LEU10 LYS11
Unit 6 SC21 GLN2 PHE3 ASP4 LEU5 SER6 THR7 ARG8 ARG9 LEU10 LYS11

Ligands
Unit 7 NAG301
Unit 8 NAG301
Unit 9 CY3101
Unit 10 CY3101

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany