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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE MOS1 STRAND TRANSFER COMPLEX
Keywords PROTEIN-DNA COMPLEX, DNA TRANSPOSASE, RECOMBINASE, INTEGRASE TURN-HELIX, BASE FLIPPING, DNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5HOO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MARINER MOS1 TRANSPOSASE  A 335 2792 0
2  Protein   MARINER MOS1 TRANSPOSASE  B 336 2799 0
3  Other macromolecule   MOS1 IR DNA NTS  C 25 520 0
4  Other macromolecule   MOS1 IR TS JOINED TO TARGET DNA,MOS1 IR TS JOINED DNA  D 36 733 0
5  Other macromolecule   MOS1 IR DNA NTS  E 25 520 0
6  Other macromolecule   MOS1 IR TS JOINED TO TARGET DNA,MOS1 IR TS JOINED DNA  F 36 724 0
7  Other macromolecule   TARGET DNA  G 10 199 0
8  Other macromolecule   TARGET DNA  H 10 199 0
9  Ligand   MARINER MOS1 TRANSPOSASE  A 1 0 1
10  Ligand   MARINER MOS1 TRANSPOSASE  B 1 0 1
11 Water     1 0 2
total       816 8486 4

Proteins
Unit 1 SER3 PHE4 VAL5 PRO6 ASN7 LYS8 GLU9 GLN10 THR11 ARG12 THR13 VAL14 LEU15 ILE16 PHE17 CYS18 PHE19 HIS20 LEU21 LYS22 LYS23 THR24 ALA25 ALA26 GLU27 SER28 HIS29 ARG30 MET31 LEU32 VAL33 GLU34 ALA35 PHE36 GLY37 GLU38 GLN39 VAL40 PRO41 THR42 VAL43 LYS44 THR45 CYS46 GLU47 ARG48 TRP49 PHE50 GLN51 ARG52 PHE53 LYS54 SER55 GLY56 ASP57 PHE58 ASP59 VAL60 ASP61 ASP62 LYS63 GLU64 HIS65 GLY66 LYS67 PRO68 PRO69 LYS70 ARG71 TYR72 GLU73 ASP74 ALA75 GLU76 LEU77 GLN78 ALA79 LEU80 LEU81 ASP82 GLU83 ASP84 ASP85 ALA86 GLN87 THR88 GLN89 LYS90 GLN91 LEU92 ALA93 GLU94 GLN95 LEU96 GLU97 VAL98 SER99 GLN100 GLN101 ALA102 VAL103 SER104 ASN105 ARG106 LEU107 ARG108 GLU109 MET110 GLY111 LYS112 ILE113 GLN114 LYS115 VAL116 GLY117 ARG118 TRP119 VAL120 PRO121 HIS122 GLU123 LEU124 ASN125 GLU126 ARG127 GLN128 MET129 GLU130 ARG131 ARG132 LYS133 ASN134 THR135 CYS136 GLU137 ILE138 LEU139 LEU140 SER141 ARG142 TYR143 LYS144 ARG145 LYS146 SER147 PHE148 LEU149 HIS150 ARG151 ILE152 VAL153 THR154 GLY155 ASP156 GLU157 LYS158 TRP159 ILE160 PHE161 PHE162 VAL163 ASN164 PRO165 LYS166 ARG167 LYS168 LYS169 SER170 TYR171 VAL172 ASP173 PRO174 GLY175 GLN176 PRO177 ALA178 THR179 SER180 THR181 ALA182 ARG183 PRO184 ASN185 ARG186 PHE187 GLY188 LYS189 LYS190 THR191 MET192 LEU193 CYS194 VAL195 TRP196 TRP197 ASP198 GLN199 SER200 GLY201 VAL202 ILE203 TYR204 TYR205 GLU206 LEU207 LEU208 LYS209 PRO210 GLY211 GLU212 THR213 VAL214 ASN215 ALA216 ALA217 ARG218 TYR219 GLN220 GLN221 GLN222 LEU223 ILE224 ASN225 LEU226 ASN227 ARG228 ALA229 LEU230 GLN231 ARG232 LYS233 ARG234 ARG243 VAL244 ILE245 PHE246 LEU247 HIS248 ASP249 ASN250 ALA251 PRO252 SER253 HIS254 THR255 ALA256 ARG257 ALA258 VAL259 ARG260 ASP261 THR262 LEU263 GLU264 THR265 LEU266 ASN267 TRP268 GLU269 VAL270 LEU271 PRO272 HIS273 ALA274 ALA275 TYR276 SER277 PRO278 ASP279 LEU280 ALA281 PRO282 SER283 ASP284 TYR285 HIS286 LEU287 PHE288 ALA289 SER290 MET291 GLY292 HIS293 ALA294 LEU295 ALA296 GLU297 GLN298 ARG299 PHE300 ASP301 SER302 TYR303 GLU304 SER305 VAL306 LYS307 LYS308 TRP309 LEU310 ASP311 GLU312 TRP313 PHE314 ALA315 ALA316 LYS317 ASP318 ASP319 GLU320 PHE321 TYR322 TRP323 ARG324 GLY325 ILE326 HIS327 LYS328 LEU329 PRO330 GLU331 ARG332 TRP333 GLU334 LYS335 CYS336 VAL337 ALA338 SER339 ASP340 GLY341 LYS342 TYR343 PHE344 GLU345
Unit 2 SER3 PHE4 VAL5 PRO6 ASN7 LYS8 GLU9 GLN10 THR11 ARG12 THR13 VAL14 LEU15 ILE16 PHE17 CYS18 PHE19 HIS20 LEU21 LYS22 LYS23 THR24 ALA25 ALA26 GLU27 SER28 HIS29 ARG30 MET31 LEU32 VAL33 GLU34 ALA35 PHE36 GLY37 GLU38 GLN39 VAL40 PRO41 THR42 VAL43 LYS44 THR45 CYS46 GLU47 ARG48 TRP49 PHE50 GLN51 ARG52 PHE53 LYS54 SER55 GLY56 ASP57 PHE58 ASP59 VAL60 ASP61 ASP62 LYS63 GLU64 HIS65 GLY66 LYS67 PRO68 PRO69 LYS70 ARG71 TYR72 GLU73 ASP74 ALA75 GLU76 LEU77 GLN78 ALA79 LEU80 LEU81 ASP82 GLU83 ASP84 ASP85 ALA86 GLN87 THR88 GLN89 LYS90 GLN91 LEU92 ALA93 GLU94 GLN95 LEU96 GLU97 VAL98 SER99 GLN100 GLN101 ALA102 VAL103 SER104 ASN105 ARG106 LEU107 ARG108 GLU109 MET110 GLY111 LYS112 ILE113 GLN114 LYS115 VAL116 GLY117 ARG118 TRP119 VAL120 PRO121 HIS122 GLU123 LEU124 ASN125 GLU126 ARG127 GLN128 MET129 GLU130 ARG131 ARG132 LYS133 ASN134 THR135 CYS136 GLU137 ILE138 LEU139 LEU140 SER141 ARG142 TYR143 LYS144 ARG145 LYS146 SER147 PHE148 LEU149 HIS150 ARG151 ILE152 VAL153 THR154 GLY155 ASP156 GLU157 LYS158 TRP159 ILE160 PHE161 PHE162 VAL163 ASN164 PRO165 LYS166 ARG167 LYS168 LYS169 SER170 TYR171 VAL172 ASP173 PRO174 GLY175 GLN176 PRO177 ALA178 THR179 SER180 THR181 ALA182 ARG183 PRO184 ASN185 ARG186 PHE187 GLY188 LYS189 LYS190 THR191 MET192 LEU193 CYS194 VAL195 TRP196 TRP197 ASP198 GLN199 SER200 GLY201 VAL202 ILE203 TYR204 TYR205 GLU206 LEU207 LEU208 LYS209 PRO210 GLY211 GLU212 THR213 VAL214 ASN215 ALA216 ALA217 ARG218 TYR219 GLN220 GLN221 GLN222 LEU223 ILE224 ASN225 LEU226 ASN227 ARG228 ALA229 LEU230 GLN231 ARG232 LYS233 ARG234 PRO235 ARG243 VAL244 ILE245 PHE246 LEU247 HIS248 ASP249 ASN250 ALA251 PRO252 SER253 HIS254 THR255 ALA256 ARG257 ALA258 VAL259 ARG260 ASP261 THR262 LEU263 GLU264 THR265 LEU266 ASN267 TRP268 GLU269 VAL270 LEU271 PRO272 HIS273 ALA274 ALA275 TYR276 SER277 PRO278 ASP279 LEU280 ALA281 PRO282 SER283 ASP284 TYR285 HIS286 LEU287 PHE288 ALA289 SER290 MET291 GLY292 HIS293 ALA294 LEU295 ALA296 GLU297 GLN298 ARG299 PHE300 ASP301 SER302 TYR303 GLU304 SER305 VAL306 LYS307 LYS308 TRP309 LEU310 ASP311 GLU312 TRP313 PHE314 ALA315 ALA316 LYS317 ASP318 ASP319 GLU320 PHE321 TYR322 TRP323 ARG324 GLY325 ILE326 HIS327 LYS328 LEU329 PRO330 GLU331 ARG332 TRP333 GLU334 LYS335 CYS336 VAL337 ALA338 SER339 ASP340 GLY341 LYS342 TYR343 PHE344 GLU345

Other macromolecules
Unit 3 DG4 DG5 DT6 DG7 DT8 DA9 DC10 DA11 DA12 DG13 DT14 DA15 DT16 DG17 DA18 DA19 DA20 DT21 DG22 DT23 DC24 DG25 DT26 DT27 DT28
Unit 4 DT0 DA1 DG2 DC3 DA4 DG5 DT6 DG7 DA29 DA30 DA31 DC32 DG33 DA34 DC35 DA36 DT37 DT38 DT39 DC40 DA41 DT42 DA43 DC44 DT45 DT46 DG47 DT48 DA49 DC50 DA51 DC52 DC53 DT54 DG55 DA56
Unit 5 DG4 DG5 DT6 DG7 DT8 DA9 DC10 DA11 DA12 DG13 DT14 DA15 DT16 DG17 DA18 DA19 DA20 DT21 DG22 DT23 DC24 DG25 DT26 DT27 DT28
Unit 6 DT0 DA1 DG2 DC3 DA4 DG5 DT6 DG7 DA29 DA30 DA31 DC32 DG33 DA34 DC35 DA36 DT37 DT38 DT39 DC40 DA41 DT42 DA43 DC44 DT45 DT46 DG47 DT48 DA49 DC50 DA51 DC52 DC53 DT54 DG55 DA56
Unit 7 DG-10 DG-9 DC-8 DC-7 DC-6 DA-5 DC-4 DT-3 DG-2 DC-1
Unit 8 DG-10 DG-9 DC-8 DC-7 DC-6 DA-5 DC-4 DT-3 DG-2 DC-1

Ligands
Unit 9 MG401
Unit 10 MG401

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany