5HJD - Sequence, Chains, Asymmetric and Biological Units

• Title: AF9 YEATS IN COMPLEX WITH HISTONE H3 CROTONYLATION AT K18
• Keywords: AF9 YEATS, HISTONE PEPTIDE, CROTONYLLYSINE, H3K18, TRANSCRIP PEPTIDE COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5HJD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROTEIN AF-9	A	138	1153	0
2	Protein	PROTEIN AF-9	C	138	1153	0
3	Protein	PROTEIN AF-9	E	138	1153	0
4	Protein	PROTEIN AF-9	G	138	1153	0
5	Protein	PROTEIN AF-9	K	138	1153	0
6	Protein	PROTEIN AF-9	N	137	1145	0
7	Protein	PROTEIN AF-9	Q	138	1153	0
8	Protein	PROTEIN AF-9	T	138	1153	0
9	Protein	PEPTIDE OF HISTONE H3.1	L	7	49	14
10	Protein	PEPTIDE OF HISTONE H3.1	M	7	49	14
11	Protein	PEPTIDE OF HISTONE H3.1	B	7	49	14
12	Protein	PEPTIDE OF HISTONE H3.1	D	7	49	14
13	Protein	PEPTIDE OF HISTONE H3.1	F	5	32	14
14	Protein	PEPTIDE OF HISTONE H3.1	H	5	32	14
15	Protein	PEPTIDE OF HISTONE H3.1	I	5	32	14
16	Protein	PEPTIDE OF HISTONE H3.1	J	6	40	14
17	Ligand	PROTEIN AF-9	A	2	0	6
18	Ligand	PROTEIN AF-9	C	3	0	7
19	Ligand	PROTEIN AF-9	E	1	0	5
20	Ligand	PROTEIN AF-9	G	5	0	25
21	Ligand	PROTEIN AF-9	K	2	0	6
22	Ligand	PROTEIN AF-9	N	2	0	10
23	Ligand	PROTEIN AF-9	Q	1	0	5
24	Ligand	PROTEIN AF-9	T	2	0	10
25	Water			39	0	41
total				1209	9548	227

Proteins

Unit 1	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 2	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 3	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 4	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 5	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 6	ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 7	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 8	MET 1 ALA 2 SER 3 SER 4 CYS 5 ALA 6 VAL 7 GLN 8 VAL 9 LYS 10 LEU 11 GLU 12 LEU 13 GLY 14 HIS 15 ARG 16 ALA 17 GLN 18 VAL 19 ARG 20 LYS 21 LYS 22 PRO 23 THR 24 VAL 25 GLU 26 GLY 27 PHE 28 THR 29 HIS 30 ASP 31 TRP 32 MET 33 VAL 34 PHE 35 VAL 36 ARG 37 GLY 38 PRO 39 GLU 40 HIS 41 SER 42 ASN 43 ILE 44 GLN 45 HIS 46 PHE 47 VAL 48 GLU 49 LYS 50 VAL 51 VAL 52 PHE 53 HIS 54 LEU 55 HIS 56 GLU 57 SER 58 PHE 59 PRO 60 ARG 61 PRO 62 LYS 63 ARG 64 VAL 65 CYS 66 LYS 67 ASP 68 PRO 69 PRO 70 TYR 71 LYS 72 VAL 73 GLU 74 GLU 75 SER 76 GLY 77 TYR 78 ALA 79 GLY 80 PHE 81 ILE 82 LEU 83 PRO 84 ILE 85 GLU 86 VAL 87 TYR 88 PHE 89 LYS 90 ASN 91 LYS 92 GLU 93 GLU 94 PRO 95 ARG 96 LYS 97 VAL 98 ARG 99 PHE 100 ASP 101 TYR 102 ASP 103 LEU 104 PHE 105 LEU 106 HIS 107 LEU 108 GLU 109 GLY 110 HIS 111 PRO 112 PRO 113 VAL 114 ASN 115 HIS 116 LEU 117 ARG 118 CYS 119 GLU 120 LYS 121 LEU 122 THR 123 PHE 124 ASN 125 ASN 126 PRO 127 THR 128 GLU 129 ASP 130 PHE 131 ARG 132 ARG 133 LYS 134 LEU 135 LEU 136 LYS 137 ALA 138
Unit 9	LYS 14 ALA 15 PRO 16 ARG 17 KCR 18 GLN 19 LEU 20
Unit 10	LYS 14 ALA 15 PRO 16 ARG 17 KCR 18 GLN 19 LEU 20
Unit 11	LYS 14 ALA 15 PRO 16 ARG 17 KCR 18 GLN 19 LEU 20
Unit 12	LYS 14 ALA 15 PRO 16 ARG 17 KCR 18 GLN 19 LEU 20
Unit 13	ALA 15 PRO 16 ARG 17 KCR 18 GLN 19
Unit 14	ALA 15 PRO 16 ARG 17 KCR 18 GLN 19
Unit 15	ALA 15 PRO 16 ARG 17 KCR 18 GLN 19
Unit 16	ALA 15 PRO 16 ARG 17 KCR 18 GLN 19 LEU 20

Ligands

Unit 17	CU 201 SO4 202
Unit 18	CU 201 CU 202 SO4 203
Unit 19	SO4 201
Unit 20	SO4 201 SO4 202 SO4 203 SO4 204 SO4 205
Unit 21	CU 201 SO4 202
Unit 22	SO4 201 SO4 202
Unit 23	SO4 201
Unit 24	SO4 201 SO4 202