5HHD - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF CHEMICALLY SYNTHESIZED HETEROCHIRAL {RF VEGF-A} PROTEIN COMPLEX IN SPACE GROUP P21
• Keywords: HETEROCHIRAL PROTEIN-PROTEIN COMPLEX, D-PROTEIN ANTAGONIST, FACTOR-INHIBITOR COMPLEX, RACEMIC CRYSTALLOGRAPHY, DE NOVO
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5HHD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	VASCULAR ENDOTHELIAL GROWTH FACTOR A	A	95	753	0
2	Protein	VASCULAR ENDOTHELIAL GROWTH FACTOR A	B	95	770	0
3	Protein	D-PEPTIDE RFX037.D	C	67	24	505
4	Protein	D-PEPTIDE RFX037.D	D	66	24	493
5	Protein	D-VASCULAR ENDOTHELIAL GROWTH FACTOR	E	95	20	750
6	Protein	D-VASCULAR ENDOTHELIAL GROWTH FACTOR	F	95	20	744
7	Protein	L-PEPTIDE RFX037.L	G	63	490	0
8	Protein	L-PEPTIDE RFX037.L	H	65	495	0
9	Ligand	VASCULAR ENDOTHELIAL GROWTH FACTOR A	A	3	0	18
10	Ligand	D-VASCULAR ENDOTHELIAL GROWTH FACTOR	F	1	0	6
11	Ligand	L-PEPTIDE RFX037.L	H	1	0	7
12	Water			343	0	343
total				989	2596	2866

Proteins

Unit 1	GLU 6 VAL 7 VAL 8 LYS 9 PHE 10 MET 11 ASP 12 VAL 13 TYR 14 GLN 15 ARG 16 SER 17 TYR 18 CYS 19 HIS 20 PRO 21 ILE 22 GLU 23 THR 24 LEU 25 VAL 26 ASP 27 ILE 28 PHE 29 GLN 30 GLU 31 TYR 32 PRO 33 ASP 34 GLU 35 ILE 36 GLU 37 TYR 38 ILE 39 PHE 40 LYS 41 PRO 42 SER 43 CYS 44 VAL 45 PRO 46 LEU 47 MET 48 ARG 49 CYS 50 GLY 51 GLY 52 CYS 53 CYS 54 ASN 55 ASP 56 GLU 57 GLY 58 LEU 59 GLU 60 CYS 61 VAL 62 PRO 63 THR 64 GLU 65 GLU 66 SER 67 ASN 68 ILE 69 THR 70 MET 71 GLN 72 ILE 73 MET 74 ARG 75 ILE 76 LYS 77 PRO 78 HIS 79 GLN 80 GLY 81 GLN 82 HIS 83 ILE 84 GLY 85 GLU 86 MET 87 SER 88 PHE 89 LEU 90 GLN 91 HIS 92 ASN 93 LYS 94 CYS 95 GLU 96 CYS 97 ARG 98 PRO 99 LYS 100
Unit 2	GLU 6 VAL 7 VAL 8 LYS 9 PHE 10 MET 11 ASP 12 VAL 13 TYR 14 GLN 15 ARG 16 SER 17 TYR 18 CYS 19 HIS 20 PRO 21 ILE 22 GLU 23 THR 24 LEU 25 VAL 26 ASP 27 ILE 28 PHE 29 GLN 30 GLU 31 TYR 32 PRO 33 ASP 34 GLU 35 ILE 36 GLU 37 TYR 38 ILE 39 PHE 40 LYS 41 PRO 42 SER 43 CYS 44 VAL 45 PRO 46 LEU 47 MET 48 ARG 49 CYS 50 GLY 51 GLY 52 CYS 53 CYS 54 ASN 55 ASP 56 GLU 57 GLY 58 LEU 59 GLU 60 CYS 61 VAL 62 PRO 63 THR 64 GLU 65 GLU 66 SER 67 ASN 68 ILE 69 THR 70 MET 71 GLN 72 ILE 73 MET 74 ARG 75 ILE 76 LYS 77 PRO 78 HIS 79 GLN 80 GLY 81 GLN 82 HIS 83 ILE 84 GLY 85 GLU 86 MET 87 SER 88 PHE 89 LEU 90 GLN 91 HIS 92 ASN 93 LYS 94 CYS 95 GLU 96 CYS 97 ARG 98 PRO 99 LYS 100
Unit 3	DAR 1 DAR 2 DAR 3 DAR 4 DAR 5 GLY 6 GLY 7 DSN 8 DTH 9 DTY 10 DLY 11 DLE 12 DIL 13 DLE 14 DSG 15 GLY 16 DLY 17 DTH 18 DLE 19 DLY 20 GLY 21 DGL 22 DTH 23 DTH 24 DTH 25 DGL 26 DAL 27 DVA 28 DAS 29 DVA 30 DPN 31 DAS 32 DAL 33 DPN 34 DAS 35 DVA 36 DPN 37 DPN 38 DVA 39 DTY 40 DAL 41 DAL 42 DSN 43 DSG 44 DPN 45 DSN 46 DAS 47 DPN 48 DAS 49 DAS 50 DTR 51 DTH 52 DTY 53 DAS 54 DAS 55 DAL 56 DTH 57 DLY 58 DTH 59 DPN 60 DTH 61 DVA 62 DTH 63 DGL 64 GLY 65 GLY 66 DSN 67
Unit 4	DAR 1 DAR 2 DAR 3 DAR 4 DAR 5 GLY 6 GLY 7 DSN 8 DTH 9 DTY 10 DLY 11 DLE 12 DIL 13 DLE 14 DSG 15 GLY 16 DLY 17 DTH 18 DLE 19 DLY 20 GLY 21 DGL 22 DTH 23 DTH 24 DTH 25 DGL 26 DAL 27 DVA 28 DAS 29 DVA 30 DPN 31 DAS 32 DAL 33 DPN 34 DAS 35 DVA 36 DPN 37 DPN 38 DVA 39 DTY 40 DAL 41 DAL 42 DSN 43 DSG 44 DPN 45 DSN 46 DAS 47 DPN 48 DAS 49 DAS 50 DTR 51 DTH 52 DTY 53 DAS 54 DAS 55 DAL 56 DTH 57 DLY 58 DTH 59 DPN 60 DTH 61 DVA 62 DTH 63 DGL 64 GLY 65 GLY 66
Unit 5	DGL 6 DVA 7 DVA 8 DLY 9 DPN 10 MED 11 DAS 12 DVA 13 DTY 14 DGN 15 DAR 16 DSN 17 DTY 18 DCY 19 DHI 20 DPR 21 DIL 22 DGL 23 DTH 24 DLE 25 DVA 26 DAS 27 DIL 28 DPN 29 DGN 30 DGL 31 DTY 32 DPR 33 DAS 34 DGL 35 DIL 36 DGL 37 DTY 38 DIL 39 DPN 40 DLY 41 DPR 42 DSN 43 DCY 44 DVA 45 DPR 46 DLE 47 MED 48 DAR 49 DCY 50 GLY 51 GLY 52 DCY 53 DCY 54 DSG 55 DAS 56 DGL 57 GLY 58 DLE 59 DGL 60 DCY 61 DVA 62 DPR 63 DTH 64 DGL 65 DGL 66 DSN 67 DSG 68 DIL 69 DTH 70 MED 71 DGN 72 DIL 73 MED 74 DAR 75 DIL 76 DLY 77 DPR 78 DHI 79 DGN 80 GLY 81 DGN 82 DHI 83 DIL 84 GLY 85 DGL 86 MED 87 DSN 88 DPN 89 DLE 90 DGN 91 DHI 92 DSG 93 DLY 94 DCY 95 DGL 96 DCY 97 DAR 98 DPR 99 DLY 100
Unit 6	DGL 6 DVA 7 DVA 8 DLY 9 DPN 10 MED 11 DAS 12 DVA 13 DTY 14 DGN 15 DAR 16 DSN 17 DTY 18 DCY 19 DHI 20 DPR 21 DIL 22 DGL 23 DTH 24 DLE 25 DVA 26 DAS 27 DIL 28 DPN 29 DGN 30 DGL 31 DTY 32 DPR 33 DAS 34 DGL 35 DIL 36 DGL 37 DTY 38 DIL 39 DPN 40 DLY 41 DPR 42 DSN 43 DCY 44 DVA 45 DPR 46 DLE 47 MED 48 DAR 49 DCY 50 GLY 51 GLY 52 DCY 53 DCY 54 DSG 55 DAS 56 DGL 57 GLY 58 DLE 59 DGL 60 DCY 61 DVA 62 DPR 63 DTH 64 DGL 65 DGL 66 DSN 67 DSG 68 DIL 69 DTH 70 MED 71 DGN 72 DIL 73 MED 74 DAR 75 DIL 76 DLY 77 DPR 78 DHI 79 DGN 80 GLY 81 DGN 82 DHI 83 DIL 84 GLY 85 DGL 86 MED 87 DSN 88 DPN 89 DLE 90 DGN 91 DHI 92 DSG 93 DLY 94 DCY 95 DGL 96 DCY 97 DAR 98 DPR 99 DLY 100
Unit 7	ARG 4 ARG 5 GLY 6 GLY 7 SER 8 THR 9 TYR 10 LYS 11 LEU 12 ILE 13 LEU 14 ASN 15 GLY 16 LYS 17 THR 18 LEU 19 LYS 20 GLY 21 GLU 22 THR 23 THR 24 THR 25 GLU 26 ALA 27 VAL 28 ASP 29 VAL 30 PHE 31 ASP 32 ALA 33 PHE 34 ASP 35 VAL 36 PHE 37 PHE 38 VAL 39 TYR 40 ALA 41 ALA 42 SER 43 ASN 44 PHE 45 SER 46 ASP 47 PHE 48 ASP 49 ASP 50 TRP 51 THR 52 TYR 53 ASP 54 ASP 55 ALA 56 THR 57 LYS 58 THR 59 PHE 60 THR 61 VAL 62 THR 63 GLU 64 GLY 65 GLY 66
Unit 8	ARG 4 ARG 5 GLY 6 GLY 7 SER 8 THR 9 TYR 10 LYS 11 LEU 12 ILE 13 LEU 14 ASN 15 GLY 16 LYS 17 THR 18 LEU 19 LYS 20 GLY 21 GLU 22 THR 23 THR 24 THR 25 GLU 26 ALA 27 VAL 28 ASP 29 VAL 30 PHE 31 ASP 32 ALA 33 PHE 34 ASP 35 VAL 36 PHE 37 PHE 38 VAL 39 TYR 40 ALA 41 ALA 42 SER 43 ASN 44 PHE 45 SER 46 ASP 47 PHE 48 ASP 49 ASP 50 TRP 51 THR 52 TYR 53 ASP 54 ASP 55 ALA 56 THR 57 LYS 58 THR 59 PHE 60 THR 61 VAL 62 THR 63 GLU 64 GLY 65 GLY 66 SER 67 ASP 68

Ligands

Unit 9	GOL 201 GOL 202 GOL 203
Unit 10	GOL 201
Unit 11	PEG 101