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Sequence, Chains, Asymmetric and Biological Units

Title PLASMODIUM VIVAX SHMT BOUND WITH PLP-GLYCINE AND GS654
Keywords ALPHA AND BETA PROTEIN, METHYLTRANSFERASE ACTIVITY, TRANSFER TRANSFERASE INHIBITOR COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5GVP     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE  A 442 3458 0
2  Protein   SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE  B 442 3458 0
3  Protein   SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE  C 442 3458 0
4  Ligand   SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE  A 4 0 95
5  Ligand   SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE  B 1 0 20
6  Ligand   SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE  C 3 0 58
7 Water     272 0 272
total       1606 10374 445
Proteins
Unit 1 MET1 PHE2 ASN3 ASN4 GLU5 PRO6 LEU7 GLU8 GLN9 ILE10 ASP11 LYS12 GLU13 LEU14 HIS15 ASP16 ILE17 LEU18 ALA19 ASP20 GLU21 GLU22 LYS23 ARG24 GLN25 ARG26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 GLY40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASN48 ARG49 VAL50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 LYS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 PHE69 ILE70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 GLN78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 ASP89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 MET147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLN158 GLY159 TYR160 VAL161 ASP162 LEU163 ASP164 ALA165 VAL166 ARG167 GLU168 MET169 ALA170 LEU171 SER172 PHE173 LYS174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 GLN192 GLN193 PHE194 ARG195 GLN196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 ILE220 LEU221 ASN222 ASN223 PRO224 PHE225 LEU226 HIS227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 GLU258 GLN259 LYS260 ILE261 ASN262 SER263 ALA264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 HIS289 SER290 PRO291 ALA292 PHE293 LYS294 GLU295 TYR296 THR297 GLN298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 LYS309 ALA310 LEU311 ILE312 SER313 LYS314 GLN315 ILE316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 PHE335 SER336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 VAL351 SER352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 VAL370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 MET377 THR378 THR379 ARG380 GLY381 ALA382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 VAL393 LEU394 ALA395 ARG396 ALA397 ILE398 LYS399 ILE400 THR401 VAL402 ASP403 LEU404 GLN405 GLU406 GLN407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 PRO420 GLY421 ASN422 ALA423 GLN424 LEU425 GLN426 GLN427 LEU428 LYS429 GLN430 GLU431 VAL432 VAL433 THR434 TRP435 ALA436 GLY437 ALA438 LEU439 PRO440 PHE441 PRO442
Unit 2 MET1 PHE2 ASN3 ASN4 GLU5 PRO6 LEU7 GLU8 GLN9 ILE10 ASP11 LYS12 GLU13 LEU14 HIS15 ASP16 ILE17 LEU18 ALA19 ASP20 GLU21 GLU22 LYS23 ARG24 GLN25 ARG26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 GLY40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASN48 ARG49 VAL50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 LYS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 PHE69 ILE70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 GLN78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 ASP89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 MET147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLN158 GLY159 TYR160 VAL161 ASP162 LEU163 ASP164 ALA165 VAL166 ARG167 GLU168 MET169 ALA170 LEU171 SER172 PHE173 LYS174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 GLN192 GLN193 PHE194 ARG195 GLN196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 ILE220 LEU221 ASN222 ASN223 PRO224 PHE225 LEU226 HIS227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 GLU258 GLN259 LYS260 ILE261 ASN262 SER263 ALA264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 HIS289 SER290 PRO291 ALA292 PHE293 LYS294 GLU295 TYR296 THR297 GLN298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 LYS309 ALA310 LEU311 ILE312 SER313 LYS314 GLN315 ILE316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 PHE335 SER336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 VAL351 SER352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 VAL370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 MET377 THR378 THR379 ARG380 GLY381 ALA382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 VAL393 LEU394 ALA395 ARG396 ALA397 ILE398 LYS399 ILE400 THR401 VAL402 ASP403 LEU404 GLN405 GLU406 GLN407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 PRO420 GLY421 ASN422 ALA423 GLN424 LEU425 GLN426 GLN427 LEU428 LYS429 GLN430 GLU431 VAL432 VAL433 THR434 TRP435 ALA436 GLY437 ALA438 LEU439 PRO440 PHE441 PRO442
Unit 3 MET1 PHE2 ASN3 ASN4 GLU5 PRO6 LEU7 GLU8 GLN9 ILE10 ASP11 LYS12 GLU13 LEU14 HIS15 ASP16 ILE17 LEU18 ALA19 ASP20 GLU21 GLU22 LYS23 ARG24 GLN25 ARG26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 GLY40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASN48 ARG49 VAL50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 LYS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 PHE69 ILE70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 GLN78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 ASP89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 MET147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLN158 GLY159 TYR160 VAL161 ASP162 LEU163 ASP164 ALA165 VAL166 ARG167 GLU168 MET169 ALA170 LEU171 SER172 PHE173 LYS174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 GLN192 GLN193 PHE194 ARG195 GLN196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 ILE220 LEU221 ASN222 ASN223 PRO224 PHE225 LEU226 HIS227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 GLU258 GLN259 LYS260 ILE261 ASN262 SER263 ALA264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 HIS289 SER290 PRO291 ALA292 PHE293 LYS294 GLU295 TYR296 THR297 GLN298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 LYS309 ALA310 LEU311 ILE312 SER313 LYS314 GLN315 ILE316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 PHE335 SER336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 VAL351 SER352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 VAL370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 MET377 THR378 THR379 ARG380 GLY381 ALA382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 VAL393 LEU394 ALA395 ARG396 ALA397 ILE398 LYS399 ILE400 THR401 VAL402 ASP403 LEU404 GLN405 GLU406 GLN407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 PRO420 GLY421 ASN422 ALA423 GLN424 LEU425 GLN426 GLN427 LEU428 LYS429 GLN430 GLU431 VAL432 VAL433 THR434 TRP435 ALA436 GLY437 ALA438 LEU439 PRO440 PHE441 PRO442
Ligands
Unit 4 PLG501 GCF502 GCF503 CL504
Unit 5 PLG501
Unit 6 PLG501 GCF502 CL503
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany