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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF MERS-COV RBD IN COMPLEX WITH A FULLY HUMAN ANTI
Keywords VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5GMQ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   S PROTEIN  A 205 1585 0
2  Protein   MCA1 HEAVY CHAIN  B 225 1671 0
3  Protein   MCA1 LIGHT CHAIN  C 209 1607 0
4  Ligand    D 3 0 36
5  Ligand   MCA1 LIGHT CHAIN  C 1 0 4
6 Water     16 0 16
total       659 4863 56

Proteins
Unit 1 VAL381 GLU382 CYS383 ASP384 PHE385 SER386 PRO387 LEU388 LEU389 SER390 GLY391 THR392 PRO393 PRO394 GLN395 VAL396 TYR397 ASN398 PHE399 LYS400 ARG401 LEU402 VAL403 PHE404 THR405 ASN406 CYS407 ASN408 TYR409 ASN410 LEU411 THR412 LYS413 LEU414 LEU415 SER416 LEU417 PHE418 SER419 VAL420 ASN421 ASP422 PHE423 THR424 CYS425 SER426 GLN427 ILE428 SER429 PRO430 ALA431 ALA432 ILE433 ALA434 SER435 ASN436 CYS437 TYR438 SER439 SER440 LEU441 ILE442 LEU443 ASP444 TYR445 PHE446 SER447 TYR448 PRO449 LEU450 SER451 MET452 LYS453 SER454 ASP455 LEU456 SER457 VAL458 SER459 SER460 ALA461 GLY462 PRO463 ILE464 SER465 GLN466 PHE467 ASN468 TYR469 LYS470 GLN471 SER472 PHE473 SER474 ASN475 PRO476 THR477 CYS478 LEU479 ILE480 LEU481 ALA482 THR483 VAL484 PRO485 HIS486 ASN487 LEU488 THR489 THR490 ILE491 THR492 LYS493 PRO494 LEU495 LYS496 TYR497 SER498 TYR499 ILE500 ASN501 LYS502 CYS503 SER504 ARG505 LEU506 LEU507 SER508 ASP509 ASP510 ARG511 THR512 GLU513 VAL514 PRO515 GLN516 LEU517 VAL518 ASN519 ALA520 ASN521 GLN522 TYR523 SER524 PRO525 CYS526 VAL527 SER528 ILE529 VAL530 PRO531 SER532 THR533 VAL534 TRP535 GLU536 ASP537 GLY538 ASP539 TYR540 TYR541 ARG542 LYS543 GLN544 LEU545 SER546 PRO547 LEU548 GLU549 GLY550 GLY551 GLY552 TRP553 LEU554 VAL555 ALA556 SER557 GLY558 SER559 THR560 VAL561 ALA562 MET563 THR564 GLU565 GLN566 LEU567 GLN568 MET569 GLY570 PHE571 GLY572 ILE573 THR574 VAL575 GLN576 TYR577 GLY578 THR581 ASN582 SER583 VAL584 CYS585 PRO586 LYS587
Unit 2 ALA-2 THR-1 ARG0 LEU1 GLU2 GLU3 SER4 GLY5 ALA6 GLU7 VAL8 LYS9 LYS10 PRO11 GLY12 SER13 SER14 VAL15 LYS16 VAL17 SER18 CYS19 LYS20 ALA21 SER22 GLY23 GLY24 THR25 PHE26 SER27 SER28 TYR29 ALA30 ILE31 SER32 TRP33 VAL34 ARG35 GLN36 ALA37 PRO38 GLY39 GLN40 GLY41 LEU42 GLU43 TRP44 MET45 GLY46 ARG47 ILE48 ILE49 PRO50 ILE51 LEU52 GLY53 ILE54 ALA55 ASN56 TYR57 ALA58 GLN59 LYS60 PHE61 GLN62 GLY63 ARG64 VAL65 THR66 ILE67 THR68 ALA69 ASP70 LYS71 SER72 THR73 SER74 THR75 ALA76 TYR77 MET78 GLU79 LEU80 SER81 SER82 LEU83 ARG84 SER85 GLU86 ASP87 THR88 ALA89 VAL90 TYR91 TYR92 CYS93 ALA94 SER95 LYS96 GLN97 GLY98 ASP99 TYR100 TYR101 ASP102 ARG103 THR104 SER105 TYR106 ALA107 PHE108 ASP109 ILE110 TRP111 GLY112 GLN113 GLY114 THR115 MET116 VAL117 THR118 VAL119 SER120 SER121 ALA122 SER123 THR124 LYS125 GLY126 PRO127 SER128 VAL129 PHE130 PRO131 LEU132 ALA133 PRO134 SER135 SER136 LYS137 SER138 THR139 SER140 GLY141 GLY142 THR143 ALA144 ALA145 LEU146 GLY147 CYS148 LEU149 VAL150 LYS151 ASP152 TYR153 PHE154 PRO155 GLU156 PRO157 VAL158 THR159 VAL160 SER161 TRP162 ASN163 SER164 GLY165 ALA166 LEU167 THR168 SER169 GLY170 VAL171 HIS172 THR173 PHE174 PRO175 ALA176 VAL177 LEU178 GLN179 SER180 SER181 GLY182 LEU183 TYR184 SER185 LEU186 SER187 SER188 VAL189 VAL190 THR191 VAL192 PRO193 SER194 SER195 SER196 LEU197 GLY198 THR199 GLN200 THR201 TYR202 ILE203 CYS204 ASN205 VAL206 ASN207 HIS208 LYS209 PRO210 SER211 ASN212 THR213 LYS214 VAL215 ASP216 LYS217 LYS218 VAL219 GLU220 PRO221 LYS222
Unit 3 ASP-1 VAL0 GLU1 LEU2 THR3 GLN4 SER5 PRO6 GLY7 THR8 LEU9 SER10 LEU11 SER12 PRO13 GLY14 GLU15 ARG16 ALA17 THR18 LEU19 SER20 CYS21 ARG22 ALA23 SER24 GLN25 SER26 VAL27 SER28 SER29 SER30 TYR31 LEU32 ALA33 TRP34 TYR35 GLN36 GLN37 LYS38 PRO39 GLY40 GLN41 ALA42 PRO43 ARG44 LEU45 LEU46 ILE47 TYR48 GLY49 ALA50 SER51 SER52 ARG53 ALA54 THR55 GLY56 ILE57 PRO58 ASP59 ARG60 PHE61 SER62 GLY63 SER64 GLY65 SER66 GLY67 THR68 ASP69 PHE70 THR71 LEU72 THR73 ILE74 SER75 ARG76 LEU77 GLU78 PRO79 GLU80 ASP81 PHE82 ALA83 VAL84 TYR85 TYR86 CYS87 GLN88 GLN89 TYR90 GLY91 SER92 SER93 PRO94 ILE95 THR96 PHE97 GLY98 GLN99 GLY100 THR101 ARG102 LEU103 GLU104 ILE105 LYS106 ARG107 THR108 VAL109 ALA110 ALA111 PRO112 SER113 VAL114 PHE115 ILE116 PHE117 PRO118 PRO119 SER120 ASP121 GLU122 GLN123 LEU124 LYS125 SER126 GLY127 THR128 ALA129 SER130 VAL131 VAL132 CYS133 LEU134 LEU135 ASN136 ASN137 PHE138 TYR139 PRO140 ARG141 GLU142 ALA143 LYS144 VAL145 GLN146 TRP147 LYS148 VAL149 ASP150 LEU153 GLN154 SER155 GLY156 ASN157 SER158 GLN159 GLU160 SER161 VAL162 THR163 GLU164 GLN165 ASP166 SER167 LYS168 ASP169 SER170 THR171 TYR172 SER173 LEU174 SER175 SER176 THR177 LEU178 THR179 LEU180 SER181 LYS182 ALA183 ASP184 TYR185 GLU186 LYS187 HIS188 LYS189 TYR191 ALA192 CYS193 GLU194 VAL195 THR196 HIS197 GLN198 GLY199 LEU200 SER201 SER202 PRO203 VAL204 THR205 LYS206 SER207 PHE208 ASN209 ARG210

Ligands
Unit 4 NAG1 MAN2 MAN3
Unit 5 EDO301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany