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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MONKEY TLR7 IN COMPLEX WITH R848
Keywords IMMUNE SYSTEM, TLR7, INNATE IMMUNITY, SSRNA RECOGNITON
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5GMH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TOLL-LIKE RECEPTOR 7  A 772 6250 0
2  Protein   TOLL-LIKE RECEPTOR 7  B 772 6250 0
3  Ligand    C 2 0 28
4  Ligand    D 2 0 28
5  Ligand    E 2 0 28
6  Ligand   TOLL-LIKE RECEPTOR 7  A 25 0 206
7  Ligand   TOLL-LIKE RECEPTOR 7  B 17 0 148
8 Water     653 0 653
total       2245 12500 1091
Proteins
Unit 1 ALA27 ARG28 TRP29 PHE30 PRO31 LYS32 THR33 LEU34 PRO35 CYS36 ASP37 VAL38 THR39 LEU40 ASP41 VAL42 SER43 LYS44 ASN45 HIS46 VAL47 ILE48 VAL49 ASP50 CYS51 THR52 ASP53 LYS54 HIS55 LEU56 THR57 GLU58 ILE59 PRO60 GLY61 GLY62 ILE63 PRO64 THR65 ASN66 THR67 THR68 ASN69 LEU70 THR71 LEU72 THR73 ILE74 ASN75 HIS76 ILE77 PRO78 ASP79 ILE80 SER81 PRO82 ALA83 SER84 PHE85 HIS86 ARG87 LEU88 VAL89 HIS90 LEU91 VAL92 GLU93 ILE94 ASP95 PHE96 ARG97 CYS98 ASN99 CYS100 VAL101 PRO102 ILE103 ARG104 LEU105 GLY106 SER107 LYS108 SER109 ASN110 MET111 CYS112 PRO113 ARG114 ARG115 LEU116 GLN117 ILE118 LYS119 PRO120 ARG121 SER122 PHE123 SER124 GLY125 LEU126 THR127 TYR128 LEU129 LYS130 SER131 LEU132 TYR133 LEU134 ASP135 GLY136 ASN137 GLN138 LEU139 LEU140 GLU141 ILE142 PRO143 GLN144 GLY145 LEU146 PRO147 PRO148 SER149 LEU150 GLN151 LEU152 LEU153 SER154 LEU155 GLU156 ALA157 ASN158 ASN159 ILE160 PHE161 SER162 ILE163 ARG164 LYS165 GLU166 GLN167 LEU168 THR169 GLU170 LEU171 ALA172 ASN173 ILE174 GLU175 ILE176 LEU177 TYR178 LEU179 GLY180 GLN181 ASN182 CYS183 TYR184 TYR185 ARG186 ASN187 PRO188 CYS189 TYR190 VAL191 SER192 TYR193 SER194 ILE195 GLU196 LYS197 ASP198 ALA199 PHE200 LEU201 ASN202 LEU203 THR204 LYS205 LEU206 LYS207 VAL208 LEU209 SER210 LEU211 LYS212 ASP213 ASN214 ASN215 VAL216 THR217 THR218 VAL219 PRO220 THR221 VAL222 LEU223 PRO224 SER225 THR226 LEU227 THR228 GLU229 LEU230 TYR231 LEU232 TYR233 ASN234 ASN235 MET236 ILE237 ALA238 GLU239 ILE240 GLN241 GLU242 ASP243 ASP244 PHE245 ASN246 ASN247 LEU248 ASN249 GLN250 LEU251 GLN252 ILE253 LEU254 ASP255 LEU256 SER257 GLY258 ASN259 CYS260 PRO261 ARG262 CYS263 TYR264 ASN265 ALA266 PRO267 PHE268 PRO269 CYS270 THR271 PRO272 CYS273 LYS274 ASN275 ASN276 SER277 PRO278 LEU279 GLN280 ILE281 PRO282 VAL283 ASN284 ALA285 PHE286 ASP287 ALA288 LEU289 THR290 GLU291 LEU292 LYS293 VAL294 LEU295 ARG296 LEU297 HIS298 SER299 ASN300 SER301 LEU302 GLN303 HIS304 VAL305 PRO306 PRO307 ARG308 TRP309 PHE310 LYS311 ASN312 ILE313 ASN314 ASN315 LEU316 GLN317 GLU318 LEU319 ASP320 LEU321 SER322 GLN323 ASN324 PHE325 LEU326 ALA327 LYS328 GLU329 ILE330 GLY331 ASP332 ALA333 LYS334 PHE335 LEU336 HIS337 PHE338 LEU339 PRO340 ASN341 LEU342 ILE343 GLN344 LEU345 ASP346 LEU347 SER348 PHE349 ASN350 PHE351 GLU352 LEU353 GLN354 VAL355 TYR356 ARG357 ALA358 SER359 MET360 ASN361 LEU362 SER363 GLN364 ALA365 PHE366 SER367 SER368 LEU369 LYS370 SER371 LEU372 LYS373 ILE374 LEU375 ARG376 ILE377 ARG378 GLY379 TYR380 VAL381 PHE382 LYS383 GLU384 LEU385 LYS386 SER387 PHE388 GLN389 LEU390 SER391 PRO392 LEU393 HIS394 ASN395 LEU396 GLN397 ASN398 LEU399 GLU400 VAL401 LEU402 ASP403 LEU404 GLY405 THR406 ASN407 PHE408 ILE409 LYS410 ILE411 ALA412 ASN413 LEU414 SER415 MET416 PHE417 LYS418 GLN419 PHE420 LYS421 ARG422 LEU423 LYS424 VAL425 ILE426 ASP427 LEU428 SER429 VAL430 ASN431 LYS432 ILE433 SER434 PRO435 VAL459 LEU460 GLU461 GLN462 LEU463 TYR464 TYR465 PHE466 ARG467 TYR468 ASP469 LYS470 TYR471 ALA472 ARG473 SER474 CYS475 SER490 CYS491 TYR492 LYS493 TYR494 GLY495 GLN496 THR497 LEU498 ASP499 LEU500 SER501 LYS502 ASN503 SER504 ILE505 PHE506 PHE507 ILE508 LYS509 SER510 SER511 ASP512 PHE513 GLN514 HIS515 LEU516 SER517 PHE518 LEU519 LYS520 CYS521 LEU522 ASN523 LEU524 SER525 GLY526 ASN527 LEU528 ILE529 SER530 GLN531 THR532 LEU533 ASN534 GLY535 SER536 GLU537 PHE538 GLN539 PRO540 LEU541 ALA542 GLU543 LEU544 ARG545 TYR546 LEU547 ASP548 PHE549 SER550 ASN551 ASN552 ARG553 LEU554 ASP555 LEU556 LEU557 HIS558 SER559 THR560 ALA561 PHE562 GLU563 GLU564 LEU565 ARG566 LYS567 LEU568 GLU569 VAL570 LEU571 ASP572 ILE573 SER574 SER575 ASN576 SER577 HIS578 TYR579 PHE580 GLN581 SER582 GLU583 GLY584 ILE585 THR586 HIS587 MET588 LEU589 ASN590 PHE591 THR592 LYS593 ASN594 LEU595 LYS596 VAL597 LEU598 GLN599 LYS600 LEU601 MET602 MET603 ASN604 ASP605 ASN606 ASP607 ILE608 SER609 SER610 SER611 THR612 SER613 ARG614 THR615 MET616 GLU617 SER618 GLU619 SER620 LEU621 ARG622 THR623 LEU624 GLU625 PHE626 ARG627 GLY628 ASN629 HIS630 LEU631 ASP632 VAL633 LEU634 TRP635 ARG636 ASP637 GLY638 ASP639 ASN640 ARG641 TYR642 LEU643 GLN644 LEU645 PHE646 LYS647 ASN648 LEU649 LEU650 LYS651 LEU652 GLU653 GLU654 LEU655 ASP656 ILE657 SER658 LYS659 ASN660 SER661 LEU662 SER663 PHE664 LEU665 PRO666 SER667 GLY668 VAL669 PHE670 ASP671 GLY672 MET673 PRO674 PRO675 ASN676 LEU677 LYS678 ASN679 LEU680 SER681 LEU682 ALA683 LYS684 ASN685 GLY686 LEU687 LYS688 SER689 PHE690 ILE691 TRP692 GLU693 LYS694 LEU695 ARG696 TYR697 LEU698 LYS699 ASN700 LEU701 GLU702 THR703 LEU704 ASP705 LEU706 SER707 HIS708 ASN709 GLN710 LEU711 THR712 THR713 VAL714 PRO715 GLU716 ARG717 LEU718 SER719 ASN720 CYS721 SER722 ARG723 SER724 LEU725 LYS726 ASN727 LEU728 ILE729 LEU730 LYS731 ASN732 ASN733 GLN734 ILE735 ARG736 SER737 LEU738 THR739 LYS740 TYR741 PHE742 LEU743 GLN744 ASP745 ALA746 PHE747 GLN748 LEU749 ARG750 TYR751 LEU752 ASP753 LEU754 SER755 SER756 ASN757 LYS758 ILE759 GLN760 MET761 ILE762 GLN763 LYS764 THR765 SER766 PHE767 PRO768 GLU769 ASN770 VAL771 LEU772 ASN773 ASN774 LEU775 LYS776 MET777 LEU778 LEU779 LEU780 HIS781 HIS782 ASN783 ARG784 PHE785 LEU786 CYS787 THR788 CYS789 ASP790 ALA791 VAL792 TRP793 PHE794 VAL795 TRP796 TRP797 VAL798 GLN799 HIS800 THR801 GLU802 VAL803 THR804 ILE805 PRO806 TYR807 LEU808 ALA809 THR810 ASP811 VAL812 THR813 CYS814 VAL815 GLY816 PRO817 GLY818 ALA819 HIS820 LYS821 GLY822 GLN823 SER824 VAL825 ILE826 SER827 LEU828 ASP829 LEU830 TYR831 THR832 CYS833 GLU834 LEU835
Unit 2 ALA27 ARG28 TRP29 PHE30 PRO31 LYS32 THR33 LEU34 PRO35 CYS36 ASP37 VAL38 THR39 LEU40 ASP41 VAL42 SER43 LYS44 ASN45 HIS46 VAL47 ILE48 VAL49 ASP50 CYS51 THR52 ASP53 LYS54 HIS55 LEU56 THR57 GLU58 ILE59 PRO60 GLY61 GLY62 ILE63 PRO64 THR65 ASN66 THR67 THR68 ASN69 LEU70 THR71 LEU72 THR73 ILE74 ASN75 HIS76 ILE77 PRO78 ASP79 ILE80 SER81 PRO82 ALA83 SER84 PHE85 HIS86 ARG87 LEU88 VAL89 HIS90 LEU91 VAL92 GLU93 ILE94 ASP95 PHE96 ARG97 CYS98 ASN99 CYS100 VAL101 PRO102 ILE103 ARG104 LEU105 GLY106 SER107 LYS108 SER109 ASN110 MET111 CYS112 PRO113 ARG114 ARG115 LEU116 GLN117 ILE118 LYS119 PRO120 ARG121 SER122 PHE123 SER124 GLY125 LEU126 THR127 TYR128 LEU129 LYS130 SER131 LEU132 TYR133 LEU134 ASP135 GLY136 ASN137 GLN138 LEU139 LEU140 GLU141 ILE142 PRO143 GLN144 GLY145 LEU146 PRO147 PRO148 SER149 LEU150 GLN151 LEU152 LEU153 SER154 LEU155 GLU156 ALA157 ASN158 ASN159 ILE160 PHE161 SER162 ILE163 ARG164 LYS165 GLU166 GLN167 LEU168 THR169 GLU170 LEU171 ALA172 ASN173 ILE174 GLU175 ILE176 LEU177 TYR178 LEU179 GLY180 GLN181 ASN182 CYS183 TYR184 TYR185 ARG186 ASN187 PRO188 CYS189 TYR190 VAL191 SER192 TYR193 SER194 ILE195 GLU196 LYS197 ASP198 ALA199 PHE200 LEU201 ASN202 LEU203 THR204 LYS205 LEU206 LYS207 VAL208 LEU209 SER210 LEU211 LYS212 ASP213 ASN214 ASN215 VAL216 THR217 THR218 VAL219 PRO220 THR221 VAL222 LEU223 PRO224 SER225 THR226 LEU227 THR228 GLU229 LEU230 TYR231 LEU232 TYR233 ASN234 ASN235 MET236 ILE237 ALA238 GLU239 ILE240 GLN241 GLU242 ASP243 ASP244 PHE245 ASN246 ASN247 LEU248 ASN249 GLN250 LEU251 GLN252 ILE253 LEU254 ASP255 LEU256 SER257 GLY258 ASN259 CYS260 PRO261 ARG262 CYS263 TYR264 ASN265 ALA266 PRO267 PHE268 PRO269 CYS270 THR271 PRO272 CYS273 LYS274 ASN275 ASN276 SER277 PRO278 LEU279 GLN280 ILE281 PRO282 VAL283 ASN284 ALA285 PHE286 ASP287 ALA288 LEU289 THR290 GLU291 LEU292 LYS293 VAL294 LEU295 ARG296 LEU297 HIS298 SER299 ASN300 SER301 LEU302 GLN303 HIS304 VAL305 PRO306 PRO307 ARG308 TRP309 PHE310 LYS311 ASN312 ILE313 ASN314 ASN315 LEU316 GLN317 GLU318 LEU319 ASP320 LEU321 SER322 GLN323 ASN324 PHE325 LEU326 ALA327 LYS328 GLU329 ILE330 GLY331 ASP332 ALA333 LYS334 PHE335 LEU336 HIS337 PHE338 LEU339 PRO340 ASN341 LEU342 ILE343 GLN344 LEU345 ASP346 LEU347 SER348 PHE349 ASN350 PHE351 GLU352 LEU353 GLN354 VAL355 TYR356 ARG357 ALA358 SER359 MET360 ASN361 LEU362 SER363 GLN364 ALA365 PHE366 SER367 SER368 LEU369 LYS370 SER371 LEU372 LYS373 ILE374 LEU375 ARG376 ILE377 ARG378 GLY379 TYR380 VAL381 PHE382 LYS383 GLU384 LEU385 LYS386 SER387 PHE388 GLN389 LEU390 SER391 PRO392 LEU393 HIS394 ASN395 LEU396 GLN397 ASN398 LEU399 GLU400 VAL401 LEU402 ASP403 LEU404 GLY405 THR406 ASN407 PHE408 ILE409 LYS410 ILE411 ALA412 ASN413 LEU414 SER415 MET416 PHE417 LYS418 GLN419 PHE420 LYS421 ARG422 LEU423 LYS424 VAL425 ILE426 ASP427 LEU428 SER429 VAL430 ASN431 LYS432 ILE433 SER434 PRO435 VAL459 LEU460 GLU461 GLN462 LEU463 TYR464 TYR465 PHE466 ARG467 TYR468 ASP469 LYS470 TYR471 ALA472 ARG473 SER474 CYS475 SER490 CYS491 TYR492 LYS493 TYR494 GLY495 GLN496 THR497 LEU498 ASP499 LEU500 SER501 LYS502 ASN503 SER504 ILE505 PHE506 PHE507 ILE508 LYS509 SER510 SER511 ASP512 PHE513 GLN514 HIS515 LEU516 SER517 PHE518 LEU519 LYS520 CYS521 LEU522 ASN523 LEU524 SER525 GLY526 ASN527 LEU528 ILE529 SER530 GLN531 THR532 LEU533 ASN534 GLY535 SER536 GLU537 PHE538 GLN539 PRO540 LEU541 ALA542 GLU543 LEU544 ARG545 TYR546 LEU547 ASP548 PHE549 SER550 ASN551 ASN552 ARG553 LEU554 ASP555 LEU556 LEU557 HIS558 SER559 THR560 ALA561 PHE562 GLU563 GLU564 LEU565 ARG566 LYS567 LEU568 GLU569 VAL570 LEU571 ASP572 ILE573 SER574 SER575 ASN576 SER577 HIS578 TYR579 PHE580 GLN581 SER582 GLU583 GLY584 ILE585 THR586 HIS587 MET588 LEU589 ASN590 PHE591 THR592 LYS593 ASN594 LEU595 LYS596 VAL597 LEU598 GLN599 LYS600 LEU601 MET602 MET603 ASN604 ASP605 ASN606 ASP607 ILE608 SER609 SER610 SER611 THR612 SER613 ARG614 THR615 MET616 GLU617 SER618 GLU619 SER620 LEU621 ARG622 THR623 LEU624 GLU625 PHE626 ARG627 GLY628 ASN629 HIS630 LEU631 ASP632 VAL633 LEU634 TRP635 ARG636 ASP637 GLY638 ASP639 ASN640 ARG641 TYR642 LEU643 GLN644 LEU645 PHE646 LYS647 ASN648 LEU649 LEU650 LYS651 LEU652 GLU653 GLU654 LEU655 ASP656 ILE657 SER658 LYS659 ASN660 SER661 LEU662 SER663 PHE664 LEU665 PRO666 SER667 GLY668 VAL669 PHE670 ASP671 GLY672 MET673 PRO674 PRO675 ASN676 LEU677 LYS678 ASN679 LEU680 SER681 LEU682 ALA683 LYS684 ASN685 GLY686 LEU687 LYS688 SER689 PHE690 ILE691 TRP692 GLU693 LYS694 LEU695 ARG696 TYR697 LEU698 LYS699 ASN700 LEU701 GLU702 THR703 LEU704 ASP705 LEU706 SER707 HIS708 ASN709 GLN710 LEU711 THR712 THR713 VAL714 PRO715 GLU716 ARG717 LEU718 SER719 ASN720 CYS721 SER722 ARG723 SER724 LEU725 LYS726 ASN727 LEU728 ILE729 LEU730 LYS731 ASN732 ASN733 GLN734 ILE735 ARG736 SER737 LEU738 THR739 LYS740 TYR741 PHE742 LEU743 GLN744 ASP745 ALA746 PHE747 GLN748 LEU749 ARG750 TYR751 LEU752 ASP753 LEU754 SER755 SER756 ASN757 LYS758 ILE759 GLN760 MET761 ILE762 GLN763 LYS764 THR765 SER766 PHE767 PRO768 GLU769 ASN770 VAL771 LEU772 ASN773 ASN774 LEU775 LYS776 MET777 LEU778 LEU779 LEU780 HIS781 HIS782 ASN783 ARG784 PHE785 LEU786 CYS787 THR788 CYS789 ASP790 ALA791 VAL792 TRP793 PHE794 VAL795 TRP796 TRP797 VAL798 GLN799 HIS800 THR801 GLU802 VAL803 THR804 ILE805 PRO806 TYR807 LEU808 ALA809 THR810 ASP811 VAL812 THR813 CYS814 VAL815 GLY816 PRO817 GLY818 ALA819 HIS820 LYS821 GLY822 GLN823 SER824 VAL825 ILE826 SER827 LEU828 ASP829 LEU830 TYR831 THR832 CYS833 GLU834 LEU835
Ligands
Unit 3 NAG1 NAG2
Unit 4 NAG1 NAG2
Unit 5 NAG1 NAG2
Unit 6 RX8901 NAG902 NAG905 NAG906 NAG907 NAG908 NAG909 NAG910 SO4911 SO4912 SO4913 SO4914 SO4915 SO4916 SO4917 SO4918 SO4919 SO4920 SO4921 SO4922 SO4923 SO4924 SO4925 SO4926 SO4927
Unit 7 RX8901 NAG902 NAG907 NAG908 NAG909 NAG910 SO4911 SO4912 SO4913 SO4914 SO4915 SO4916 SO4917 SO4918 SO4919 SO4920 SO4921
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany