5GJ4 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF NS2B-NS3 PROTEASE FROM ZIKA VIRUS CAUGHT AFTER CLEAVAGE
• Keywords: ZIKA VIRUS PROTEASE, ANTIVIRAL DRUG DISCOVERY, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5GJ4	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SERINE PROTEASE SUBUNIT NS2B	A	43	334	0
2	Protein	SERINE PROTEASE NS3	B	153	1144	0
3	Protein	SERINE PROTEASE SUBUNIT NS2B	C	43	334	0
4	Protein	SERINE PROTEASE NS3	D	152	1139	0
5	Protein	SERINE PROTEASE SUBUNIT NS2B	E	43	334	0
6	Protein	SERINE PROTEASE NS3	F	152	1135	0
7	Protein	SERINE PROTEASE SUBUNIT NS2B	G	43	334	0
8	Protein	SERINE PROTEASE NS3	H	153	1144	0
9	Ligand	SERINE PROTEASE NS3	B	1	0	1
10	Ligand	SERINE PROTEASE NS3	D	1	0	1
11	Water			1138	0	1138
total				1922	5898	1140

Proteins

Unit 1	VAL 49 ASP 50 MET 51 TYR 52 ILE 53 GLU 54 ARG 55 ALA 56 GLY 57 ASP 58 ILE 59 THR 60 TRP 61 GLU 62 LYS 63 ASP 64 ALA 65 GLU 66 VAL 67 THR 68 GLY 69 ASN 70 SER 71 PRO 72 ARG 73 LEU 74 ASP 75 VAL 76 ALA 77 LEU 78 ASP 79 GLU 80 SER 81 GLY 82 ASP 83 PHE 84 SER 85 LEU 86 VAL 87 THR 127 GLY 128 LYS 129 ARG 130
Unit 2	THR 19 ASP 20 GLY 21 VAL 22 TYR 23 ARG 24 VAL 25 MET 26 THR 27 ARG 28 ARG 29 LEU 30 LEU 31 GLY 32 SER 33 THR 34 GLN 35 VAL 36 GLY 37 VAL 38 GLY 39 VAL 40 MET 41 GLN 42 GLU 43 GLY 44 VAL 45 PHE 46 HIS 47 THR 48 MET 49 TRP 50 HIS 51 VAL 52 THR 53 LYS 54 GLY 55 ALA 56 ALA 57 LEU 58 ARG 59 SER 60 GLY 61 GLU 62 GLY 63 ARG 64 LEU 65 ASP 66 PRO 67 TYR 68 TRP 69 GLY 70 ASP 71 VAL 72 LYS 73 GLN 74 ASP 75 LEU 76 VAL 77 SER 78 TYR 79 CYS 80 GLY 81 PRO 82 TRP 83 LYS 84 LEU 85 ASP 86 ALA 87 ALA 88 TRP 89 ASP 90 GLY 91 LEU 92 SER 93 GLU 94 VAL 95 GLN 96 LEU 97 LEU 98 ALA 99 VAL 100 PRO 101 PRO 102 GLY 103 GLU 104 ARG 105 ALA 106 LYS 107 ASN 108 ILE 109 GLN 110 THR 111 LEU 112 PRO 113 GLY 114 ILE 115 PHE 116 LYS 117 THR 118 LYS 119 ASP 120 GLY 121 ASP 122 ILE 123 GLY 124 ALA 125 VAL 126 ALA 127 LEU 128 ASP 129 TYR 130 PRO 131 ALA 132 GLY 133 THR 134 SER 135 GLY 136 SER 137 PRO 138 ILE 139 LEU 140 ASP 141 LYS 142 CYS 143 GLY 144 ARG 145 VAL 146 ILE 147 GLY 148 LEU 149 TYR 150 GLY 151 ASN 152 GLY 153 VAL 154 VAL 155 ILE 156 LYS 157 ASN 158 GLY 159 SER 160 TYR 161 VAL 162 SER 163 ALA 164 ILE 165 THR 166 GLN 167 GLY 168 LYS 169 ARG 170 GLU 171
Unit 3	VAL 49 ASP 50 MET 51 TYR 52 ILE 53 GLU 54 ARG 55 ALA 56 GLY 57 ASP 58 ILE 59 THR 60 TRP 61 GLU 62 LYS 63 ASP 64 ALA 65 GLU 66 VAL 67 THR 68 GLY 69 ASN 70 SER 71 PRO 72 ARG 73 LEU 74 ASP 75 VAL 76 ALA 77 LEU 78 ASP 79 GLU 80 SER 81 GLY 82 ASP 83 PHE 84 SER 85 LEU 86 VAL 87 THR 127 GLY 128 LYS 129 ARG 130
Unit 4	THR 19 ASP 20 GLY 21 VAL 22 TYR 23 ARG 24 VAL 25 MET 26 THR 27 ARG 28 ARG 29 LEU 30 LEU 31 GLY 32 SER 33 THR 34 GLN 35 VAL 36 GLY 37 VAL 38 GLY 39 VAL 40 MET 41 GLN 42 GLU 43 GLY 44 VAL 45 PHE 46 HIS 47 THR 48 MET 49 TRP 50 HIS 51 VAL 52 THR 53 LYS 54 GLY 55 ALA 56 ALA 57 LEU 58 ARG 59 SER 60 GLY 61 GLU 62 GLY 63 ARG 64 LEU 65 ASP 66 PRO 67 TYR 68 TRP 69 GLY 70 ASP 71 VAL 72 LYS 73 GLN 74 ASP 75 LEU 76 VAL 77 SER 78 TYR 79 CYS 80 GLY 81 PRO 82 TRP 83 LYS 84 LEU 85 ASP 86 ALA 87 ALA 88 TRP 89 ASP 90 GLY 91 LEU 92 SER 93 GLU 94 VAL 95 GLN 96 LEU 97 LEU 98 ALA 99 VAL 100 PRO 101 PRO 102 GLY 103 GLU 104 ARG 105 ALA 106 LYS 107 ASN 108 ILE 109 GLN 110 THR 111 LEU 112 PRO 113 GLY 114 ILE 115 PHE 116 LYS 117 THR 118 LYS 119 ASP 120 GLY 121 ASP 122 ILE 123 GLY 124 ALA 125 VAL 126 ALA 127 LEU 128 ASP 129 TYR 130 PRO 131 ALA 132 GLY 133 THR 134 SER 135 GLY 136 SER 137 PRO 138 ILE 139 LEU 140 ASP 141 LYS 142 CYS 143 GLY 144 ARG 145 VAL 146 ILE 147 GLY 148 LEU 149 TYR 150 GLY 151 ASN 152 GLY 153 VAL 154 VAL 155 ILE 156 LYS 157 ASN 158 GLY 159 SER 160 TYR 161 VAL 162 SER 163 ALA 164 ILE 165 THR 166 GLN 167 GLY 168 LYS 169 ARG 170
Unit 5	VAL 49 ASP 50 MET 51 TYR 52 ILE 53 GLU 54 ARG 55 ALA 56 GLY 57 ASP 58 ILE 59 THR 60 TRP 61 GLU 62 LYS 63 ASP 64 ALA 65 GLU 66 VAL 67 THR 68 GLY 69 ASN 70 SER 71 PRO 72 ARG 73 LEU 74 ASP 75 VAL 76 ALA 77 LEU 78 ASP 79 GLU 80 SER 81 GLY 82 ASP 83 PHE 84 SER 85 LEU 86 VAL 87 THR 127 GLY 128 LYS 129 ARG 130
Unit 6	THR 19 ASP 20 GLY 21 VAL 22 TYR 23 ARG 24 VAL 25 MET 26 THR 27 ARG 28 ARG 29 LEU 30 LEU 31 GLY 32 SER 33 THR 34 GLN 35 VAL 36 GLY 37 VAL 38 GLY 39 VAL 40 MET 41 GLN 42 GLU 43 GLY 44 VAL 45 PHE 46 HIS 47 THR 48 MET 49 TRP 50 HIS 51 VAL 52 THR 53 LYS 54 GLY 55 ALA 56 ALA 57 LEU 58 ARG 59 SER 60 GLY 61 GLU 62 GLY 63 ARG 64 LEU 65 ASP 66 PRO 67 TYR 68 TRP 69 GLY 70 ASP 71 VAL 72 LYS 73 GLN 74 ASP 75 LEU 76 VAL 77 SER 78 TYR 79 CYS 80 GLY 81 PRO 82 TRP 83 LYS 84 LEU 85 ASP 86 ALA 87 ALA 88 TRP 89 ASP 90 GLY 91 LEU 92 SER 93 GLU 94 VAL 95 GLN 96 LEU 97 LEU 98 ALA 99 VAL 100 PRO 101 PRO 102 GLY 103 GLU 104 ARG 105 ALA 106 LYS 107 ASN 108 ILE 109 GLN 110 THR 111 LEU 112 PRO 113 GLY 114 ILE 115 PHE 116 LYS 117 THR 118 LYS 119 ASP 120 GLY 121 ASP 122 ILE 123 GLY 124 ALA 125 VAL 126 ALA 127 LEU 128 ASP 129 TYR 130 PRO 131 ALA 132 GLY 133 THR 134 SER 135 GLY 136 SER 137 PRO 138 ILE 139 LEU 140 ASP 141 LYS 142 CYS 143 GLY 144 ARG 145 VAL 146 ILE 147 GLY 148 LEU 149 TYR 150 GLY 151 ASN 152 GLY 153 VAL 154 VAL 155 ILE 156 LYS 157 ASN 158 GLY 159 SER 160 TYR 161 VAL 162 SER 163 ALA 164 ILE 165 THR 166 GLN 167 GLY 168 LYS 169 ARG 170
Unit 7	VAL 49 ASP 50 MET 51 TYR 52 ILE 53 GLU 54 ARG 55 ALA 56 GLY 57 ASP 58 ILE 59 THR 60 TRP 61 GLU 62 LYS 63 ASP 64 ALA 65 GLU 66 VAL 67 THR 68 GLY 69 ASN 70 SER 71 PRO 72 ARG 73 LEU 74 ASP 75 VAL 76 ALA 77 LEU 78 ASP 79 GLU 80 SER 81 GLY 82 ASP 83 PHE 84 SER 85 LEU 86 VAL 87 THR 127 GLY 128 LYS 129 ARG 130
Unit 8	THR 19 ASP 20 GLY 21 VAL 22 TYR 23 ARG 24 VAL 25 MET 26 THR 27 ARG 28 ARG 29 LEU 30 LEU 31 GLY 32 SER 33 THR 34 GLN 35 VAL 36 GLY 37 VAL 38 GLY 39 VAL 40 MET 41 GLN 42 GLU 43 GLY 44 VAL 45 PHE 46 HIS 47 THR 48 MET 49 TRP 50 HIS 51 VAL 52 THR 53 LYS 54 GLY 55 ALA 56 ALA 57 LEU 58 ARG 59 SER 60 GLY 61 GLU 62 GLY 63 ARG 64 LEU 65 ASP 66 PRO 67 TYR 68 TRP 69 GLY 70 ASP 71 VAL 72 LYS 73 GLN 74 ASP 75 LEU 76 VAL 77 SER 78 TYR 79 CYS 80 GLY 81 PRO 82 TRP 83 LYS 84 LEU 85 ASP 86 ALA 87 ALA 88 TRP 89 ASP 90 GLY 91 LEU 92 SER 93 GLU 94 VAL 95 GLN 96 LEU 97 LEU 98 ALA 99 VAL 100 PRO 101 PRO 102 GLY 103 GLU 104 ARG 105 ALA 106 LYS 107 ASN 108 ILE 109 GLN 110 THR 111 LEU 112 PRO 113 GLY 114 ILE 115 PHE 116 LYS 117 THR 118 LYS 119 ASP 120 GLY 121 ASP 122 ILE 123 GLY 124 ALA 125 VAL 126 ALA 127 LEU 128 ASP 129 TYR 130 PRO 131 ALA 132 GLY 133 THR 134 SER 135 GLY 136 SER 137 PRO 138 ILE 139 LEU 140 ASP 141 LYS 142 CYS 143 GLY 144 ARG 145 VAL 146 ILE 147 GLY 148 LEU 149 TYR 150 GLY 151 ASN 152 GLY 153 VAL 154 VAL 155 ILE 156 LYS 157 ASN 158 GLY 159 SER 160 TYR 161 VAL 162 SER 163 ALA 164 ILE 165 THR 166 GLN 167 GLY 168 LYS 169 ARG 170 GLU 171

Ligands

Unit 9	CL 2001
Unit 10	CL 201