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Sequence, Chains, Asymmetric and Biological Units

Title BODY REGION OF THE U4/U6.U5 TRI-SNRNP
Keywords TRANSCRIPTION, SNRNP, SPLICEOSOME, RNA-PROTEIN COMPLEX, U4/U SNRNP
Experiment ELECTRON MICROSCOPY
Number of Models  1


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        Header     Asymmetric unit     Biological unit  

PDB   5GAP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    V 67 1426 0
2  RNA    W 56 1190 0
3  RNA    U 20 414 0
4  Other macromolecule   UNKNOWN PROTEIN  x 82 410 0
5  Protein   PRE-MRNA-SPLICING FACTOR 8  A 1349 11066 0
6  Protein   U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4  H 357 2789 0
7  Protein   PRE-MRNA-SPLICING FACTOR 6  J 729 5822 0
8  Protein   SPLICEOSOMAL PROTEIN DIB1  D 140 1151 0
9  Protein   PRE-MRNA-PROCESSING FACTOR 31  F 415 3218 0
10  Protein   U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP3  G 318 2632 0
11  Protein   13 KDA RIBONUCLEOPROTEIN-ASSOCIATED PROTEINPRE-MRNA-SPLICING HELICASE BRR2  K 124 936 0
12  Protein   13 KDA RIBONUCLEOPROTEIN-ASSOCIATED PROTEINPRE-MRNA-SPLICING HELICASE BRR2  B 71 522 0
total       3728 31576 0

Proteins
Unit 5 ASP751 ALA752 TYR753 TYR754 ASP755 LEU756 GLU757 LEU758 ARG759 ASN760 SER761 VAL762 MET763 ASP764 ASP765 ILE766 LEU767 GLU768 MET769 MET770 PRO771 GLU772 SER773 ILE774 ARG775 GLN776 LYS777 LYS778 ALA779 ARG780 THR781 ILE782 LEU783 GLN784 HIS785 LEU786 SER787 GLU788 ALA789 TRP790 ARG791 CYS792 TRP793 LYS794 ALA795 ASN796 ILE797 PRO798 TRP799 ASP800 VAL801 PRO802 GLY803 MET804 PRO805 ALA806 PRO807 ILE808 LYS809 LYS810 ILE811 ILE812 GLU813 ARG814 TYR815 ILE816 LYS817 SER818 LYS819 ALA820 ASP821 ALA822 TRP823 VAL824 SER825 ALA826 ALA827 HIS828 TYR829 ASN830 ARG831 GLU832 ARG833 ILE834 LYS835 ARG836 GLY837 ALA838 HIS839 VAL840 GLU841 LYS842 THR843 MET844 VAL845 LYS846 LYS847 ASN848 LEU849 GLY850 ARG851 LEU852 THR853 ARG854 LEU855 TRP856 ILE857 LYS858 ASN859 GLU860 GLN861 GLU862 ARG863 GLN864 ARG865 GLN866 ILE867 GLN868 LYS869 ASN870 GLY871 PRO872 GLU873 ILE874 THR875 PRO876 GLU877 GLU878 ALA879 THR880 THR881 ILE882 PHE883 SER884 VAL885 MET886 VAL887 GLU888 TRP889 LEU890 GLU891 SER892 ARG893 SER894 PHE895 SER896 PRO897 ILE898 PRO899 PHE900 PRO901 PRO902 LEU903 THR904 TYR905 LYS906 ASN907 ASP908 THR909 LYS910 ILE911 LEU912 VAL913 LEU914 ALA915 LEU916 GLU917 ASP918 LEU919 LYS920 ASP921 VAL922 TYR923 ALA924 SER925 LYS926 VAL927 ARG928 LEU929 ASN930 ALA931 SER932 GLU933 ARG934 GLU935 GLU936 LEU937 ALA938 LEU939 ILE940 GLU941 GLU942 ALA943 TYR944 ASP945 ASN946 PRO947 HIS948 ASP949 THR950 LEU951 ASN952 ARG953 ILE954 LYS955 LYS956 TYR957 LEU958 LEU959 THR960 GLN961 ARG962 VAL963 PHE964 LYS965 PRO966 VAL967 ASP968 ILE969 THR970 MET971 MET972 GLU973 ASN974 TYR975 GLN976 ASN977 ILE978 SER979 PRO980 VAL981 TYR982 SER983 VAL984 ASP985 PRO986 LEU987 GLU988 LYS989 ILE990 THR991 ASP992 ALA993 TYR994 LEU995 ASP996 GLN997 TYR998 LEU999 TRP1000 TYR1001 GLU1002 ALA1003 ASP1004 GLN1005 ARG1006 LYS1007 LEU1008 PHE1009 PRO1010 ASN1011 TRP1012 ILE1013 LYS1014 PRO1015 SER1016 ASP1017 SER1018 GLU1019 ILE1020 PRO1021 PRO1022 LEU1023 LEU1024 VAL1025 TYR1026 LYS1027 TRP1028 THR1029 GLN1030 GLY1031 ILE1032 ASN1033 ASN1034 LEU1035 SER1036 GLU1037 ILE1038 TRP1039 ASP1040 VAL1041 SER1042 ARG1043 GLY1044 GLN1045 SER1046 ALA1047 VAL1048 LEU1049 LEU1050 GLU1051 THR1052 THR1053 LEU1054 GLY1055 GLU1056 MET1057 ALA1058 GLU1059 LYS1060 ILE1061 ASP1062 PHE1063 THR1064 LEU1065 LEU1066 ASN1067 ARG1068 LEU1069 LEU1070 ARG1071 LEU1072 ILE1073 VAL1074 ASP1075 PRO1076 ASN1077 ILE1078 ALA1079 ASP1080 TYR1081 ILE1082 THR1083 ALA1084 LYS1085 ASN1086 ASN1087 VAL1088 VAL1089 ILE1090 ASN1091 PHE1092 LYS1093 ASP1094 MET1095 SER1096 HIS1097 VAL1098 ASN1099 LYS1100 TYR1101 GLY1102 LEU1103 ILE1104 ARG1105 GLY1106 LEU1107 LYS1108 PHE1109 ALA1110 SER1111 PHE1112 ILE1113 PHE1114 GLN1115 TYR1116 TYR1117 GLY1118 LEU1119 VAL1120 ILE1121 ASP1122 LEU1123 LEU1124 LEU1125 LEU1126 GLY1127 GLN1128 GLU1129 ARG1130 ALA1131 THR1132 ASP1133 LEU1134 ALA1135 GLY1136 PRO1137 ALA1138 ASN1139 ASN1140 PRO1141 ASN1142 GLU1143 PHE1144 MET1145 GLN1146 PHE1147 LYS1148 SER1149 LYS1150 GLU1151 VAL1152 GLU1153 LYS1154 ALA1155 HIS1156 PRO1157 ILE1158 ARG1159 LEU1160 TYR1161 THR1162 ARG1163 TYR1164 LEU1165 ASP1166 ARG1167 ILE1168 TYR1169 MET1170 LEU1171 PHE1172 HIS1173 PHE1174 GLU1175 GLU1176 ASP1177 GLU1178 GLY1179 GLU1180 GLU1181 LEU1182 THR1183 ASP1184 GLU1185 TYR1186 LEU1187 ALA1188 GLU1189 ASN1190 PRO1191 ASP1192 PRO1193 ASN1194 PHE1195 GLU1196 ASN1197 SER1198 ILE1199 GLY1200 TYR1201 ASN1202 ASN1203 ARG1204 LYS1205 CYS1206 TRP1207 PRO1208 LYS1209 ASP1210 SER1211 ARG1212 MET1213 ARG1214 LEU1215 ILE1216 ARG1217 GLN1218 ASP1219 VAL1220 ASN1221 LEU1222 GLY1223 ARG1224 ALA1225 VAL1226 PHE1227 TRP1228 GLU1229 ILE1230 GLN1231 SER1232 ARG1233 VAL1234 PRO1235 THR1236 SER1237 LEU1238 THR1239 SER1240 ILE1241 LYS1242 TRP1243 GLU1244 ASN1245 ALA1246 PHE1247 VAL1248 SER1249 VAL1250 TYR1251 SER1252 LYS1253 ASN1254 ASN1255 PRO1256 ASN1257 LEU1258 LEU1259 PHE1260 SER1261 MET1262 CYS1263 GLY1264 PHE1265 GLU1266 VAL1267 ARG1268 ILE1269 LEU1270 PRO1271 ARG1272 GLN1273 ARG1274 MET1275 GLU1276 GLU1277 VAL1278 VAL1279 SER1280 ASN1281 ASP1282 GLU1283 GLY1284 VAL1285 TRP1286 ASP1287 LEU1288 VAL1289 ASP1290 GLU1291 ARG1292 THR1293 LYS1294 GLN1295 ARG1296 THR1297 ALA1298 LYS1299 ALA1300 TYR1301 LEU1302 LYS1303 VAL1304 SER1305 GLU1306 GLU1307 GLU1308 ILE1309 LYS1310 LYS1311 PHE1312 ASP1313 SER1314 ARG1315 ILE1316 ARG1317 GLY1318 ILE1319 LEU1320 MET1321 ALA1322 SER1323 GLY1324 SER1325 THR1326 THR1327 PHE1328 THR1329 LYS1330 VAL1331 ALA1332 ALA1333 LYS1334 TRP1335 ASN1336 THR1337 SER1338 LEU1339 ILE1340 SER1341 LEU1342 PHE1343 THR1344 TYR1345 PHE1346 ARG1347 GLU1348 ALA1349 ILE1350 VAL1351 ALA1352 THR1353 GLU1354 PRO1355 LEU1356 LEU1357 ASP1358 ILE1359 LEU1360 VAL1361 LYS1362 GLY1363 GLU1364 THR1365 ARG1366 ILE1367 GLN1368 ASN1369 ARG1370 VAL1371 LYS1372 LEU1373 GLY1374 LEU1375 ASN1376 SER1377 LYS1378 MET1379 PRO1380 THR1381 ARG1382 PHE1383 PRO1384 PRO1385 ALA1386 VAL1387 PHE1388 TYR1389 THR1390 PRO1391 LYS1392 GLU1393 LEU1394 GLY1395 GLY1396 LEU1397 GLY1398 MET1399 ILE1400 SER1401 ALA1402 SER1403 HIS1404 ILE1405 LEU1406 ILE1407 PRO1408 ALA1409 SER1410 ASP1411 LEU1412 SER1413 TRP1414 SER1415 LYS1416 GLN1417 THR1418 ASP1419 THR1420 GLY1421 ILE1422 THR1423 HIS1424 PHE1425 ARG1426 ALA1427 ASP1433 GLU1434 LYS1435 LEU1436 ILE1437 PRO1438 THR1439 ILE1440 PHE1441 ARG1442 TYR1443 ILE1444 THR1445 THR1446 TRP1447 GLU1448 ASN1449 GLU1450 PHE1451 LEU1452 ASP1453 SER1454 GLN1455 ARG1456 VAL1457 TRP1458 ALA1459 GLU1460 TYR1461 ALA1462 THR1463 LYS1464 ARG1465 GLN1466 GLU1467 ALA1468 ILE1469 GLN1470 GLN1471 ASN1472 ARG1473 ARG1474 LEU1475 ALA1476 PHE1477 GLU1478 GLU1479 LEU1480 GLU1481 GLY1482 SER1483 TRP1484 ASP1485 ARG1486 GLY1487 ILE1488 PRO1489 ARG1490 ILE1491 SER1492 THR1493 LEU1494 PHE1495 GLN1496 ARG1497 ASP1498 ARG1499 HIS1500 THR1501 LEU1502 ALA1503 TYR1504 ASP1505 ARG1506 GLY1507 HIS1508 ARG1509 ILE1510 ARG1511 ARG1512 GLU1513 PHE1514 LYS1515 GLN1516 TYR1517 SER1518 LEU1519 GLU1520 ARG1521 ASN1522 SER1523 PRO1524 PHE1525 TRP1526 TRP1527 THR1528 ASN1529 SER1530 HIS1531 HIS1532 ASP1533 GLY1534 LYS1535 LEU1536 TRP1537 ASN1538 LEU1539 ASN1540 ALA1541 TYR1542 ARG1543 THR1544 ASP1545 VAL1546 ILE1547 GLN1548 ALA1549 LEU1550 GLY1551 GLY1552 ILE1553 GLU1554 THR1555 ILE1556 LEU1557 GLU1558 HIS1559 THR1560 LEU1561 PHE1562 LYS1563 GLY1564 THR1565 GLY1566 PHE1567 ASN1568 SER1569 TRP1570 GLU1571 GLY1572 LEU1573 PHE1574 TRP1575 GLU1576 LYS1577 ALA1578 SER1579 GLY1580 PHE1581 GLU1582 ASP1583 SER1584 MET1585 GLN1586 PHE1587 LYS1588 LYS1589 LEU1590 THR1591 HIS1592 ALA1593 GLN1594 ARG1595 THR1596 GLY1597 LEU1598 SER1599 GLN1600 ILE1601 PRO1602 ASN1603 ARG1604 ARG1605 PHE1606 THR1607 LEU1608 TRP1609 TRP1610 SER1611 PRO1612 THR1613 ILE1614 ASN1615 ARG1616 ALA1617 ASN1618 VAL1619 TYR1620 VAL1621 GLY1622 PHE1623 LEU1624 VAL1625 GLN1626 LEU1627 ASP1628 LEU1629 THR1630 GLY1631 ILE1632 PHE1633 LEU1634 HIS1635 GLY1636 LYS1637 ILE1638 PRO1639 THR1640 LEU1641 LYS1642 ILE1643 SER1644 LEU1645 ILE1646 GLN1647 ILE1648 PHE1649 ARG1650 ALA1651 HIS1652 LEU1653 TRP1654 GLN1655 LYS1656 ILE1657 HIS1658 GLU1659 SER1660 ILE1661 VAL1662 PHE1663 ASP1664 ILE1665 CYS1666 GLN1667 ILE1668 LEU1669 ASP1670 GLY1671 GLU1672 LEU1673 ASP1674 VAL1675 LEU1676 GLN1677 ILE1678 GLU1679 SER1680 VAL1681 THR1682 LYS1683 GLU1684 THR1685 VAL1686 HIS1687 PRO1688 ARG1689 LYS1690 SER1691 TYR1692 LYS1693 MET1694 ASN1695 SER1696 SER1697 ALA1698 ALA1699 ASP1700 ILE1701 THR1702 MET1703 GLU1704 SER1705 VAL1706 HIS1707 GLU1708 TRP1709 GLU1710 VAL1711 SER1712 LYS1713 PRO1714 SER1715 LEU1716 LEU1717 HIS1718 GLU1719 THR1720 ASN1721 ASP1722 SER1723 PHE1724 LYS1725 GLY1726 LEU1727 ILE1728 THR1729 ASN1730 LYS1731 MET1732 TRP1733 PHE1734 ASP1735 VAL1736 GLN1737 LEU1738 ARG1739 TYR1740 GLY1741 ASP1742 TYR1743 ASP1744 SER1745 HIS1746 ASP1747 ILE1748 SER1749 ARG1750 TYR1751 VAL1752 ARG1753 ALA1754 LYS1755 PHE1756 LEU1757 ASP1758 TYR1759 THR1760 THR1761 ASP1762 ASN1763 VAL1764 SER1765 MET1766 TYR1767 PRO1768 SER1769 PRO1770 THR1771 GLY1772 VAL1773 MET1774 ILE1775 GLY1776 ILE1777 ASP1778 LEU1779 ALA1780 TYR1781 ASN1782 MET1783 TYR1784 ASP1785 ALA1786 TYR1787 GLY1788 ASN1789 TRP1790 PHE1791 ASN1792 GLY1793 LEU1794 LYS1795 PRO1796 LEU1797 ILE1798 GLN1799 ASN1800 SER1801 MET1802 ARG1803 THR1804 ILE1805 MET1806 LYS1807 ALA1808 ASN1809 PRO1810 ALA1811 LEU1812 TYR1813 VAL1814 LEU1815 ARG1816 GLU1817 ARG1818 ILE1819 ARG1820 LYS1821 GLY1822 LEU1823 GLN1824 ILE1825 TYR1826 GLN1827 SER1828 SER1829 VAL1830 GLN1831 GLU1832 PRO1833 PHE1834 LEU1835 ASN1836 SER1837 SER1838 ASN1839 TYR1840 ALA1841 GLU1842 LEU1843 PHE1844 ASN1845 ASN1846 ASP1847 ILE1848 LYS1849 LEU1850 PHE1851 VAL1852 ASP1853 ASP1854 THR1855 ASN1856 VAL1857 TYR1858 ARG1859 VAL1860 THR1861 VAL1862 HIS1863 LYS1864 THR1865 PHE1866 GLU1867 GLY1868 ASN1869 VAL1870 ALA1871 THR1872 LYS1873 ALA1874 ILE1875 ASN1876 GLY1877 CYS1878 ILE1879 PHE1880 THR1881 LEU1882 ASN1883 PRO1884 LYS1885 THR1886 GLY1887 HIS1888 LEU1889 PHE1890 LEU1891 LYS1892 ILE1893 ILE1894 HIS1895 THR1896 SER1897 VAL1898 TRP1899 ALA1900 GLY1901 GLN1902 LYS1903 ARG1904 LEU1905 SER1906 GLN1907 LEU1908 ALA1909 LYS1910 TRP1911 LYS1912 THR1913 ALA1914 GLU1915 GLU1916 VAL1917 SER1918 ALA1919 LEU1920 VAL1921 ARG1922 SER1923 LEU1924 PRO1925 LYS1926 GLU1927 GLU1928 GLN1929 PRO1930 LYS1931 GLN1932 ILE1933 ILE1934 VAL1935 THR1936 ARG1937 LYS1938 ALA1939 MET1940 LEU1941 ASP1942 PRO1943 LEU1944 GLU1945 VAL1946 HIS1947 MET1948 LEU1949 ASP1950 PHE1951 PRO1952 ASN1953 ILE1954 ALA1955 ILE1956 ARG1957 PRO1958 THR1959 GLU1960 LEU1961 ARG1962 LEU1963 PRO1964 PHE1965 SER1966 ALA1967 ALA1968 MET1969 SER1970 ILE1971 ASP1972 LYS1973 LEU1974 SER1975 ASP1976 VAL1977 VAL1978 MET1979 LYS1980 ALA1981 THR1982 GLU1983 PRO1984 GLN1985 MET1986 VAL1987 LEU1988 PHE1989 ASN1990 ILE1991 TYR1992 ASP1993 ASP1994 TRP1995 LEU1996 ASP1997 ARG1998 ILE1999 SER2000 SER2001 TYR2002 THR2003 ALA2004 PHE2005 SER2006 ARG2007 LEU2008 THR2009 LEU2010 LEU2011 LEU2012 ARG2013 ALA2014 LEU2015 LYS2016 THR2017 ASN2018 GLU2019 GLU2020 SER2021 ALA2022 LYS2023 MET2024 ILE2025 LEU2026 LEU2027 SER2028 ASP2029 PRO2030 THR2031 ILE2032 THR2033 ILE2034 LYS2035 SER2036 TYR2037 HIS2038 LEU2039 TRP2040 PRO2041 SER2042 PHE2043 THR2044 ASP2045 GLU2046 GLN2047 TRP2048 ILE2049 THR2050 ILE2051 GLU2052 SER2053 GLN2054 MET2055 ARG2056 ASP2057 LEU2058 ILE2059 LEU2060 THR2061 GLU2062 TYR2063 GLY2064 ARG2065 LYS2066 TYR2067 ASN2068 VAL2069 ASN2070 ILE2071 SER2072 ALA2073 LEU2074 THR2075 GLN2076 THR2077 GLU2078 ILE2079 LYS2080 ASP2081 ILE2082 ILE2083 LEU2084 GLY2085 GLN2086 ASN2087 ILE2088 LYS2089 ALA2090 PRO2091 SER2092 VAL2093 LYS2094 ARG2095 GLN2096 LYS2097 MET2098 ALA2099 GLU2100 LEU2101 GLU2102 ALA2103 ALA2104
Unit 6 PHE109 PHE110 THR111 PRO112 ALA113 THR114 SER115 GLU116 LEU117 ILE118 PHE119 ALA120 ARG121 ARG122 PHE123 LEU124 ILE125 ASN126 TYR127 SER128 LEU129 GLU130 ARG131 SER132 ARG133 LYS134 ARG135 LEU136 GLN137 LYS138 GLU139 MET140 GLU141 ARG142 HIS143 GLN144 LYS145 PHE146 ASN147 THR148 ARG149 GLN150 GLU151 LEU152 LEU153 SER154 ARG155 ARG156 THR157 GLU158 LEU159 GLN160 ARG161 MET162 ALA163 ASN164 LEU165 GLU166 LEU167 ALA168 GLY169 SER170 GLN171 LEU172 VAL173 SER174 THR175 LYS176 PRO177 ILE178 SER179 ALA180 VAL181 SER182 LEU183 SER184 THR185 ASP186 ASP187 MET188 VAL189 VAL190 ALA191 THR192 GLY193 SER194 TRP195 ALA196 GLY197 ASP198 LEU199 GLN200 VAL201 LEU202 ASN203 SER204 GLN205 THR206 LEU207 GLN208 PRO209 LEU210 THR211 GLN212 LYS213 LEU214 ASP215 SER216 HIS217 VAL218 GLY219 LYS220 ILE221 GLY222 ALA223 ILE224 ASP225 TRP226 HIS227 PRO228 ASP229 SER230 ASN231 ASN232 GLN233 MET234 ILE235 SER236 CYS237 ALA238 GLU239 ASP240 GLY241 LEU242 ILE243 LYS244 ASN245 PHE246 GLN247 TYR248 SER249 ASN250 GLU251 GLU252 GLY253 GLY254 LEU255 ARG256 LEU257 LEU258 GLY259 ASP260 LEU261 VAL262 GLY263 HIS264 GLU265 ARG266 ARG267 ILE268 SER269 ASP270 VAL271 LYS272 TYR273 HIS274 PRO275 SER276 GLY277 LYS278 PHE279 ILE280 GLY281 SER282 ALA283 SER284 HIS285 ASP286 MET287 THR288 TRP289 ARG290 LEU291 TRP292 ASP293 ALA294 SER295 THR296 HIS297 GLN298 GLU299 LEU300 LEU301 LEU302 GLN303 GLU304 GLY305 HIS306 ASP307 LYS308 GLY309 VAL310 PHE311 SER312 LEU313 SER314 PHE315 GLN316 CYS317 ASP318 GLY319 SER320 LEU321 VAL322 CYS323 SER324 GLY325 GLY326 MET327 ASP328 SER329 LEU330 SER331 MET332 LEU333 TRP334 ASP335 ILE336 ARG337 SER338 GLY339 SER340 LYS341 VAL342 MET343 THR344 LEU345 ALA346 GLY347 HIS348 SER349 LYS350 PRO351 ILE352 TYR353 THR354 VAL355 ALA356 TRP357 SER358 PRO359 ASN360 GLY361 TYR362 GLN363 VAL364 ALA365 THR366 GLY367 GLY368 GLY369 ASP370 GLY371 ILE372 ILE373 ASN374 VAL375 TRP376 ASP377 ILE378 ARG379 LYS380 ARG381 ASP382 GLU383 GLY384 GLN385 LEU386 ASN387 GLN388 ILE389 LEU390 ALA391 HIS392 ARG393 ASN394 ILE395 VAL396 THR397 GLN398 VAL399 ARG400 PHE401 SER402 LYS403 GLU404 ASP405 GLY406 GLY407 LYS408 LYS409 LEU410 VAL411 SER412 CYS413 GLY414 TYR415 ASP416 ASN417 LEU418 ILE419 ASN420 VAL421 TYR422 SER423 SER424 ASP425 THR426 TRP427 LEU428 LYS429 MET430 GLY431 SER432 LEU433 ALA434 GLY435 HIS436 THR437 ASP438 LYS439 ILE440 ILE441 SER442 LEU443 ASP444 ILE445 SER446 ASN447 ASN448 SER449 HIS450 PHE451 LEU452 VAL453 SER454 GLY455 GLY456 TRP457 ASP458 ARG459 SER460 ILE461 LYS462 LEU463 TRP464 ASN465
Unit 7 GLY155 ASN156 VAL157 ASP158 LEU159 ASN160 LYS161 LEU162 THR163 GLU164 GLU165 ARG166 GLU167 LYS168 LEU169 LEU170 GLN171 SER172 GLN173 ILE174 ASP175 GLU176 ASN177 LEU178 ALA179 GLN180 LEU181 THR182 LYS183 ASN184 ALA185 SER186 ASN187 PRO188 ILE189 GLN190 VAL191 ASN192 LYS193 PRO194 ASN195 ALA196 ALA197 THR198 ASP199 ALA200 LEU201 SER202 TYR203 LEU204 LYS205 ASP206 LEU207 GLU208 ASN209 ASP210 ARG211 VAL212 ASN213 SER214 LEU215 SER216 ASP217 ALA218 THR219 LEU220 GLU221 ASP222 LEU223 GLN224 LYS225 MET226 ARG227 THR228 ILE229 LEU230 LYS231 SER232 TYR233 ARG234 LYS235 ALA236 ASP237 PRO238 THR239 ASN240 PRO241 GLN242 GLY243 TRP244 ILE245 ALA246 SER247 ALA248 ARG249 LEU250 GLU251 GLU252 LYS253 ALA254 ARG255 LYS256 PHE257 SER258 VAL259 ALA260 LYS261 LYS262 ILE263 ILE264 GLU265 ASN266 GLY267 CYS268 GLN269 GLU270 CYS271 PRO272 ARG273 SER274 SER275 ASP276 ILE277 TRP278 LEU279 GLU280 ASN281 ILE282 ARG283 LEU284 HIS285 GLU286 SER287 ASP288 VAL289 HIS290 TYR291 CYS292 LYS293 THR294 LEU295 VAL296 ALA297 THR298 ALA299 ILE300 ASN301 PHE302 ASN303 PRO304 THR305 SER306 PRO307 LEU308 LEU309 TRP310 PHE311 LYS312 ALA313 ILE314 ASP315 LEU316 GLU317 SER318 THR319 THR320 VAL321 ASN322 LYS323 TYR324 ARG325 VAL326 VAL327 ARG328 LYS329 ALA330 LEU331 GLN332 GLU333 ILE334 PRO335 ARG336 ASP337 GLU338 GLY339 LEU340 TRP341 LYS342 LEU343 ALA344 VAL345 SER346 PHE347 GLU348 ALA349 ASP350 LYS351 ALA352 GLN353 VAL354 ILE355 LYS356 MET357 LEU358 GLU359 LYS360 ALA361 THR362 GLN363 PHE364 ILE365 PRO366 GLN367 SER368 MET369 ASP370 LEU371 LEU372 THR373 ALA374 TYR375 THR376 ASN377 LEU378 GLN379 SER380 TYR381 HIS382 ASN383 ALA384 LYS385 MET386 THR387 LEU388 ASN389 SER390 PHE391 ARG392 LYS393 ILE394 LEU395 PRO396 GLN397 GLU398 PRO399 GLU400 ILE401 TRP402 ILE403 ILE404 SER405 THR406 LEU407 LEU408 GLU409 GLU410 ARG411 ASN412 ASN413 PRO414 LYS420 LEU421 VAL422 SER423 LEU424 LEU425 LYS426 GLU427 GLY428 LEU429 LEU430 GLU431 LEU432 SER433 LYS434 ASN435 GLY436 TYR437 LYS438 ALA439 THR440 LEU441 SER442 ALA443 TRP444 LEU445 LYS446 ARG447 ALA448 GLU449 ALA450 LEU451 ASN452 ASP453 ALA454 PRO455 ASN456 SER457 ASN458 LEU459 THR460 CYS461 GLN462 ALA463 ILE464 VAL465 TYR466 ALA467 ILE468 LEU469 GLU470 TRP471 LEU472 ARG473 GLU474 SER475 GLY476 GLU477 TYR478 GLU479 SER480 GLU481 LEU482 ASN483 ASN484 VAL485 ASP486 GLN487 ILE488 LEU489 GLU490 LYS491 MET492 PRO493 HIS494 SER495 LYS496 VAL497 GLN498 ILE499 ALA500 VAL501 LEU502 LYS503 LYS504 LEU505 ILE506 GLN507 TRP508 ASP509 PRO510 CYS511 ASP512 THR513 VAL514 LEU515 TRP516 SER517 ARG518 LEU519 LYS520 MET521 ALA522 THR523 GLU524 SER525 TYR526 GLU530 GLU531 LEU532 LEU533 ALA534 PHE535 PHE536 GLN537 GLU538 LEU539 LEU540 PHE541 GLN542 THR543 SER546 ASP547 ASP548 ILE549 ARG550 ALA551 ASN552 MET553 ARG554 GLU555 LYS556 SER557 PRO558 GLY559 LEU560 LEU561 MET562 MET563 TYR564 VAL565 SER566 GLU567 TYR568 TRP569 LYS570 ALA571 GLN572 LYS573 GLY574 ASP575 THR576 ARG577 GLN578 THR579 LEU580 VAL581 LEU582 ILE583 ASP584 GLN585 ILE586 ILE587 ASP588 PHE589 ALA590 PRO591 HIS592 ASN593 LEU594 ASP595 LEU596 ARG597 PHE598 PHE599 LYS600 ILE601 LYS602 LEU603 LEU604 GLY605 ARG606 SER607 LEU608 GLN609 LEU610 ASP611 GLU612 LEU613 ARG614 ASP615 PHE616 PHE617 GLN618 GLN619 THR620 PHE621 SER622 SER623 LEU624 GLU625 ASP626 PHE627 LYS628 ILE629 SER630 GLY631 THR632 GLU633 ARG634 LEU635 TYR636 TYR637 LYS638 TYR639 VAL640 ASN641 PHE642 LEU643 ARG644 TYR645 GLN646 ASP647 LEU648 ASN649 GLU650 GLU651 ALA652 ILE653 LYS654 PHE655 LEU656 ASN657 GLU658 ARG659 CYS660 LEU661 LYS662 SER663 PHE664 PRO665 ILE666 CYS667 HIS668 LYS669 PHE670 PHE671 LEU672 GLN673 LEU674 GLY675 GLN676 ILE677 TYR678 HIS679 SER680 MET681 GLY682 ASN683 ILE684 GLU685 MET686 SER687 ARG688 GLU689 THR690 TYR691 LEU692 SER693 GLY694 THR695 ARG696 LEU697 VAL698 PRO699 ASN700 CYS701 PRO702 LEU703 LEU704 TRP705 VAL706 SER707 LEU708 SER709 LYS710 ILE711 ASP712 GLU713 ILE714 ASP715 LEU716 LYS717 ASN718 PRO719 VAL720 ARG721 ALA722 ARG723 SER724 ILE725 LEU726 ASP727 ARG728 GLY729 LEU730 LEU731 LYS732 ASN733 PRO734 ASP735 ASP736 VAL737 LEU738 PHE739 TYR740 ILE741 ALA742 LYS743 ILE744 GLN745 MET746 GLU747 ILE748 ARG749 LEU750 GLY751 ASN752 LEU753 ASP754 GLN755 ALA756 GLU757 LEU758 LEU759 VAL760 THR761 GLN762 ALA763 LEU764 GLN765 LYS766 PHE767 PRO768 SER769 ASN770 ALA771 LEU772 LEU773 TRP774 VAL775 GLU776 GLN777 ILE778 LYS779 LEU780 PHE781 LYS782 HIS783 GLY784 ASN785 LYS786 SER787 SER788 LEU789 LYS790 LYS791 THR792 ILE793 PHE794 GLN795 ASP796 ALA797 LEU798 ARG799 ARG800 THR801 GLN802 ASN803 ASP804 HIS805 ARG806 VAL807 LEU808 LEU809 GLU810 ILE811 GLY812 VAL813 SER814 PHE815 TYR816 ALA817 GLU818 ALA819 GLN820 TYR821 GLU822 THR823 SER824 LEU825 LYS826 TRP827 LEU828 GLU829 ARG830 ALA831 LEU832 LYS833 LYS834 CYS835 SER836 ARG837 TYR838 GLY839 ASP840 THR841 TRP842 VAL843 TRP844 LEU845 PHE846 ARG847 THR848 TYR849 ALA850 ARG851 LEU852 GLY853 LYS854 ASP855 THR856 VAL857 ASP858 LEU859 TYR860 ASN861 MET862 PHE863 ASP864 GLN865 CYS866 GLU867 PRO868 THR869 TYR870 GLY871 PRO872 GLU873 TRP874 ILE875 ALA876 ALA877 SER878 LYS879 ASN880 CYS886 THR887 PRO888 ARG889 GLU890 ILE891 LEU892 LEU893 ARG894 LEU895 MET896 ASN897 ASP898
Unit 8 ALA2 SER3 VAL4 LEU5 LEU6 PRO7 GLN8 LEU9 ARG10 THR11 GLY12 TRP13 HIS14 VAL15 ASP16 GLN17 ALA18 ILE19 VAL20 THR21 GLU22 THR23 LYS24 ARG25 LEU26 VAL27 VAL28 ILE29 ARG30 PHE31 GLY32 ARG33 LYS34 ASN35 ASP36 ARG37 GLN38 CYS39 MET40 ILE41 MET42 ASP43 GLU44 LEU45 LEU46 SER47 SER48 ILE49 ALA50 GLU51 ARG52 VAL53 ARG54 ASN55 PHE56 ALA57 VAL58 ILE59 TYR60 LEU61 CYS62 ASP63 ILE64 ASP65 GLU66 VAL67 SER68 ASP69 PHE70 ASP71 GLU72 MET73 TYR74 GLU75 LEU76 THR77 ASP78 PRO79 MET80 THR81 VAL82 MET83 PHE84 PHE85 TYR86 HIS87 ASN88 LYS89 HIS90 MET91 MET92 CYS93 ASP94 PHE95 GLY96 THR97 GLY98 ASN99 ASN100 ASN101 LYS102 LEU103 ASN104 PHE105 ILE106 VAL107 ASP108 ASP109 LYS110 GLN111 GLU112 MET113 ILE114 ASP115 ILE116 LEU117 GLU118 THR119 ILE120 PHE121 ARG122 GLY123 ALA124 ARG125 LYS126 ASN127 LYS128 GLY129 LEU130 VAL131 VAL132 SER133 PRO134 TYR135 ASP136 TYR137 ASN138 HIS139 LYS140 ARG141
Unit 9 PRO43 PHE44 GLU45 ILE46 LEU47 PRO48 GLU49 SER50 ILE51 GLU52 LEU53 PHE54 ARG55 THR56 LEU57 ALA58 LEU59 ILE60 SER61 PRO62 ASP63 ARG64 LEU65 SER66 LEU67 SER68 GLU69 THR70 ALA71 GLN72 ILE73 LEU74 PRO75 LYS76 ILE77 VAL78 ASP79 LEU80 LYS81 ARG82 ILE83 LEU84 GLN85 GLN86 GLN87 GLU88 ILE89 ASP90 PHE91 ILE92 LYS93 LEU94 LEU95 PRO96 PHE97 PHE98 ASN99 GLU100 ILE101 ILE102 PRO103 LEU104 ILE105 LYS106 SER107 ASN108 ILE109 LYS110 LEU111 MET112 HIS113 ASN114 PHE115 LEU116 ILE117 SER118 LEU119 TYR120 SER121 ARG122 ARG123 PHE124 PRO125 GLU126 LEU127 SER128 SER129 LEU130 ILE131 PRO132 SER133 PRO134 LEU135 GLN136 TYR137 SER138 LYS139 VAL140 ILE141 SER142 ILE143 LEU144 GLU145 ASN146 GLU147 ASN148 TYR149 SER150 LYS151 ASN152 GLU153 SER154 ASP155 GLU156 LEU157 PHE158 PHE159 HIS160 LEU161 GLU162 ASN163 LYS164 ALA165 LYS166 LEU167 THR168 ARG169 GLU170 GLN171 ILE172 LEU173 VAL174 LEU175 THR176 MET177 SER178 MET179 LYS180 THR181 SER182 PHE183 LYS184 ASN185 LYS186 GLU187 PRO188 LEU189 ASP190 ILE191 LYS192 THR193 ARG194 THR195 GLN196 ILE197 LEU198 GLU199 ALA200 ASN201 SER202 ILE203 LEU204 GLU205 ASN206 LEU207 TRP208 LYS209 LEU210 GLN211 GLU212 ASP213 ILE214 GLY215 GLN216 TYR217 ILE218 ALA219 SER220 LYS221 ILE222 SER223 ILE224 ILE225 ALA226 PRO227 ASN228 VAL229 CYS230 PHE231 LEU232 VAL233 GLY234 PRO235 GLU236 ILE237 ALA238 ALA239 GLN240 LEU241 ILE242 ALA243 HIS244 ALA245 GLY246 GLY247 VAL248 LEU249 GLU250 PHE251 SER252 ARG253 ILE254 PRO255 SER256 CYS257 ASN258 ILE259 ALA260 SER261 ILE262 GLY263 LYS264 ASN265 LYS266 HIS267 LEU268 SER269 HIS270 GLU271 LEU272 HIS273 THR274 LEU275 GLU276 SER277 GLY278 VAL279 ARG280 GLN281 GLU282 GLY283 TYR284 LEU285 PHE286 ALA287 SER288 ASP289 MET290 ILE291 GLN292 LYS293 PHE294 PRO295 VAL296 SER297 VAL298 HIS299 LYS300 GLN301 MET302 LEU303 ARG304 MET305 LEU306 CYS307 ALA308 LYS309 VAL310 SER311 LEU312 ALA313 ALA314 ARG315 VAL316 ASP317 ALA318 GLY319 GLN320 LYS321 ASN322 GLY323 ASP324 ARG325 ASN326 THR327 VAL328 LEU329 ALA330 HIS331 LYS332 TRP333 LYS334 ALA335 GLU336 LEU337 SER338 LYS339 LYS340 ALA341 ARG342 LYS343 LEU344 SER345 GLU346 ALA347 PRO348 SER349 ILE350 SER351 GLU352 THR353 LYS354 ALA355 LEU356 PRO357 ILE358 PRO359 GLU360 ASP361 GLN362 PRO363 LYS364 LYS365 LYS366 ARG367 ALA368 GLY369 ARG370 LYS371 PHE372 ARG373 LYS374 TYR375 LYS376 GLU377 LYS378 PHE379 ARG380 LEU381 SER382 HIS383 VAL384 ARG385 GLN386 LEU387 GLN388 ASN389 ARG390 MET391 GLU392 PHE393 GLY394 LYS395 GLN396 GLU397 GLN398 THR399 VAL400 LEU401 ASP402 SER403 TYR404 GLY405 GLU406 GLU407 VAL408 GLY409 LEU410 GLY411 MET412 SER413 ASN414 THR415 SER416 LEU417 GLN418 GLN419 ALA420 VAL421 GLY422 ALA423 THR424 SER425 GLY426 SER427 ARG428 ARG429 SER430 ALA431 GLY432 ASN433 GLN434 ALA435 LYS436 LEU437 THR438 LYS439 VAL440 MET441 LYS442 HIS443 ARG444 ILE445 SER446 GLU447 ALA448 ASN449 GLN450 GLN451 ALA452 ASP453 GLU454 PHE455 LEU456 ILE457
Unit 10 LEU150 LEU151 ASP152 LEU153 SER154 LYS155 PHE156 LYS157 ILE158 TYR159 TYR160 ASP161 ASN162 ASN163 HIS164 GLY165 TYR166 GLU167 TRP168 TRP169 ASP170 THR171 ALA172 TYR173 LEU174 ASP175 GLU176 LYS177 GLY178 GLU179 LEU180 MET181 GLU182 LYS183 TYR184 ASP185 MET186 ASN187 GLY188 THR189 SER190 PRO191 ALA192 GLU193 GLU194 LYS195 LEU196 ALA197 GLU198 ASP199 ILE200 ASP201 GLU202 VAL203 ASP204 ASP205 ASP206 ASP207 ASP208 ASP209 GLU210 HIS211 PRO212 SER213 ILE214 ARG215 TYR216 VAL217 ALA218 HIS219 PRO220 LEU221 PRO222 GLU223 LYS224 ILE225 ASN226 GLU227 ALA228 LYS229 VAL230 SER231 ILE232 LYS233 ALA234 TYR235 LEU236 THR237 GLN238 HIS239 GLU240 ARG241 LYS242 ARG243 LEU244 ARG245 ARG246 ASN247 ARG248 ARG249 LYS250 MET251 ALA252 ARG253 GLU254 ALA255 ARG256 GLU257 ILE258 LYS259 ILE260 LYS261 LEU262 GLY263 LEU264 LEU265 PRO266 LYS267 PRO268 GLU269 PRO270 LYS271 VAL272 LYS273 LEU274 SER275 ASN276 MET277 MET278 SER279 VAL280 PHE281 GLU282 ASN283 ASP284 GLN285 ASN286 ILE287 THR288 ASP289 PRO290 THR291 ALA292 TRP293 GLU294 LYS295 VAL296 VAL297 LYS298 ASP299 GLN300 VAL301 ASP302 LEU303 ARG304 LYS305 ARG306 LYS307 HIS308 LEU309 GLU310 GLU311 ASN312 GLU313 ARG314 ARG315 HIS316 GLU317 ASP318 ALA319 ILE320 LYS321 ARG322 ARG323 LYS324 GLU325 ALA326 VAL327 ASN328 MET329 ASN330 VAL331 GLU332 LYS333 PRO334 THR335 VAL336 TYR337 HIS338 CYS339 LYS340 VAL341 PHE342 GLN343 PHE344 LYS345 ASN346 LEU347 GLN348 ASN349 PRO350 LYS351 ILE352 ARG353 PHE354 LYS355 LEU356 LYS357 MET358 ASN359 SER360 LYS361 GLU362 LEU363 SER364 LEU365 LYS366 GLY367 LEU368 CYS369 LEU370 ARG371 ILE372 ARG373 ASP374 ASP375 GLY376 PRO377 GLY378 ILE379 ILE380 ILE381 VAL382 VAL383 GLY384 ASN385 GLU386 LYS387 SER388 CYS389 LYS390 PHE391 TYR392 GLU393 ASN394 LEU395 VAL396 MET397 LYS398 ARG399 ILE400 LYS401 TRP402 ASN403 GLU404 ASP405 PHE406 GLU407 LEU408 HIS409 THR410 ASN411 THR412 GLY413 ASP414 ILE415 LYS416 MET417 ASP418 MET419 HIS420 ASN421 ASN422 SER423 ILE424 SER425 LYS426 THR427 TRP428 GLU429 GLY430 TYR431 LEU432 GLN433 ASP434 CYS435 LYS436 PHE437 LYS438 GLY439 TRP440 PHE441 MET442 LYS443 VAL444 CYS445 ASN446 ASP447 GLN448 ASP449 SER450 LEU451 LEU452 ARG453 THR454 LEU455 GLY456 GLN457 PHE458 ASP459 SER460 GLU461 HIS462 PHE463 TYR464 SER465 PRO466 VAL467
Unit 11 ALA3 PRO4 ASN5 PRO6 LYS7 ALA8 PHE9 PRO10 LEU11 ALA12 ASP13 ALA14 ALA15 LEU16 THR17 GLN18 GLN19 ILE20 LEU21 ASP22 VAL23 VAL24 GLN25 GLN26 ALA27 ALA28 ASN29 LEU30 ARG31 GLN32 LEU33 LYS34 LYS35 GLY36 ALA37 ASN38 GLU39 ALA40 THR41 LYS42 THR43 LEU44 ASN45 ARG46 GLY47 ILE48 SER49 GLU50 PHE51 ILE52 ILE53 MET54 ALA55 ALA56 ASP57 CYS58 GLU59 PRO60 ILE61 GLU62 ILE63 LEU64 LEU65 HIS66 LEU67 PRO68 LEU69 LEU70 CYS71 GLU72 ASP73 LYS74 ASN75 VAL76 PRO77 TYR78 VAL79 PHE80 VAL81 PRO82 SER83 ARG84 VAL85 ALA86 LEU87 GLY88 ARG89 ALA90 CYS91 GLY92 VAL93 SER94 ARG95 PRO96 VAL97 ILE98 ALA99 ALA100 SER101 ILE102 THR103 THR104 ASN105 ASP106 ALA107 SER108 ALA109 ILE110 LYS111 THR112 GLN113 ILE114 TYR115 ALA116 VAL117 LYS118 ASP119 LYS120 ILE121 GLU122 THR123 LEU124 LEU125 ILE126
Unit 12 ALA363 LYS364 SER365 THR366 GLU367 ASN368 GLU369 ILE370 PRO371 ASN372 LEU373 ILE374 GLU375 LYS376 MET377 VAL378 ALA379 LYS380 GLY381 LEU382 ASN383 ASP384 LEU385 VAL386 GLU387 GLN388 TYR389 LYS390 PHE391 ARG392 GLU393 THR394 THR395 HIS396 SER397 LYS398 ARG399 GLU400 LEU401 ASP402 SER403 GLY404 ASP405 ASP406 GLN407 PRO408 GLN409 SER410 SER411 GLU412 ALA413 LYS414 ARG415 THR416 LYS417 PHE418 SER419 ASN420 PRO421 ALA422 ILE423 PRO424 PRO425 VAL426 ILE427 ASP428 LEU429 GLU430 LYS431 ILE432 LYS433

Nucleic acids
Unit 1 A1 U2 C3 C4 U5 U6 A7 U8 G9 C10 A11 C12 G13 G14 G15 A16 A17 A18 U19 A20 C21 G22 C23 A24 U25 A26 U27 C28 A29 G30 U31 G32 A33 G34 G35 A36 U37 U38 C39 G40 U41 C42 C43 G44 A45 G46 A47 U48 U49 G50 U51 G52 U53 U54 U55 U56 U57 G58 C59 U60 G61 G62 U63 U64 G65 A66 A67
Unit 2 A26 U27 U28 U29 G30 G31 U32 C33 A34 A35 U36 U37 U38 G39 A44 A45 U46 A47 C48 A49 G50 A51 G55 A56 U57 C58 A59 G60 C61 A62 G63 U64 U65 C66 C67 C68 C69 U70 G71 C72 A73 U74 A75 A76 G77 G78 A79 U80 G81 A82 A83 C84 C85 G86 U87 U88
Unit 3 U88 U89 C90 U91 U92 G93 C94 C95 U96 U97 U98 U99 A100 C101 C102 A103 G104 A105 A106 C107

Other macromolecules
Unit 4 UNK1 UNK2 UNK3 UNK4 UNK5 UNK6 UNK7 UNK8 UNK9 UNK10 UNK11 UNK12 UNK13 UNK14 UNK15 UNK16 UNK17 UNK18 UNK19 UNK20 UNK21 UNK22 UNK23 UNK24 UNK25 UNK26 UNK27 UNK28 UNK29 UNK30 UNK31 UNK32 UNK33 UNK34 UNK35 UNK36 UNK37 UNK38 UNK39 UNK40 UNK41 UNK42 UNK43 UNK44 UNK45 UNK46 UNK47 UNK48 UNK49 UNK50 UNK51 UNK52 UNK53 UNK54 UNK55 UNK56 UNK57 UNK58 UNK59 UNK60 UNK61 UNK62 UNK101 UNK102 UNK103 UNK104 UNK105 UNK106 UNK107 UNK108 UNK109 UNK110 UNK111 UNK112 UNK113 UNK114 UNK115 UNK116 UNK117 UNK118 UNK119 UNK120

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany