5G52 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTALLOGRAPHIC STRUCTURE OF FULL PARTICLE OF DEFORMED WING
• Keywords: VIRUS, PICORNAVIRALES, IFLAVIRIDAE, IFLAVIRUS, DWV CAPSID, P JELLYROLL, CATALYTIC SITE PROTEASE, LIPASE ESTERASE RECEPTO
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5G52	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	VP1	A	243	1910	0
2	Protein	VP2	B	250	1973	0
3	Protein	VP3	C	397	3142	0
4	Ligand	VP3	C	1	0	20
total				891	7025	20

Proteins

Unit 1	GLY 1 GLU 2 GLU 3 SER 4 ARG 5 ASN 6 THR 7 THR 8 VAL 9 LEU 10 ASP 11 THR 12 THR 13 THR 14 THR 15 LEU 16 GLN 17 SER 18 SER 19 GLY 20 PHE 21 GLY 22 ARG 23 ALA 24 PHE 25 PHE 26 GLY 27 GLU 28 ALA 29 PHE 30 ASN 31 ASP 32 LEU 33 LYS 34 THR 35 LEU 36 MET 37 ARG 38 ARG 39 TYR 40 GLN 41 LEU 42 TYR 43 GLY 44 GLN 45 LEU 46 LEU 47 LEU 48 SER 49 VAL 50 THR 51 THR 52 ASP 53 LYS 54 ASP 55 ILE 56 ASP 57 HIS 58 CYS 59 MET 60 PHE 61 THR 62 PHE 63 PRO 64 CYS 65 LEU 66 PRO 67 GLN 68 GLY 69 LEU 70 ALA 71 LEU 72 ASP 73 ILE 74 GLY 75 SER 76 ALA 77 GLY 78 SER 79 PRO 80 HIS 81 GLU 82 ILE 83 PHE 84 ASN 85 ARG 86 CYS 87 ARG 88 ASP 89 GLY 90 ILE 91 ILE 92 PRO 93 LEU 94 ILE 95 ALA 96 SER 97 GLY 98 TYR 99 ARG 100 PHE 101 TYR 102 ARG 103 GLY 104 ASP 105 LEU 106 ARG 107 TYR 108 LYS 109 ILE 110 VAL 111 PHE 112 PRO 113 SER 114 ASN 115 VAL 116 ASN 117 SER 118 ASN 119 ILE 120 TRP 121 VAL 122 GLN 123 HIS 124 ARG 125 PRO 126 ASP 127 ARG 128 ARG 129 LEU 130 GLU 131 GLY 132 TRP 133 SER 134 ALA 135 ALA 136 LYS 137 ILE 138 VAL 139 ASN 140 CYS 141 ASP 142 ALA 143 VAL 144 SER 145 THR 146 GLY 147 GLN 148 GLY 149 VAL 150 TYR 151 ASN 152 HIS 153 GLY 154 TYR 155 ALA 156 SER 157 HIS 158 ILE 159 GLN 160 ILE 161 THR 162 ARG 163 VAL 164 ASN 165 ASN 166 VAL 167 ILE 168 GLU 169 LEU 170 GLU 171 VAL 172 PRO 173 PHE 174 TYR 175 ASN 176 ALA 177 THR 178 CYS 179 TYR 180 ASN 181 TYR 182 LEU 183 GLN 184 ALA 185 PHE 186 ASN 187 ALA 188 SER 189 SER 190 ALA 191 ALA 192 SER 193 SER 194 TYR 195 ALA 196 VAL 197 SER 198 LEU 199 GLY 200 GLU 201 ILE 202 SER 203 VAL 204 GLY 205 PHE 206 VAL 217 ASN 218 LYS 219 PRO 220 VAL 221 THR 222 ILE 223 TYR 224 TYR 225 SER 226 ILE 227 GLY 228 ASP 229 GLY 230 MET 231 GLN 232 PHE 233 SER 234 GLN 235 TRP 236 VAL 237 GLY 238 TYR 239 GLN 240 PRO 241 MET 242 MET 243 ILE 244 LEU 245 ASP 246 GLN 247 LEU 248 PRO 249 ALA 250 PRO 251 VAL 252 VAL 253
Unit 2	MET 1 ASP 2 ASN 3 PRO 4 ASN 5 PRO 6 GLY 7 PRO 8 ASP 9 GLY 10 GLU 11 GLY 12 GLU 13 VAL 14 GLU 15 LEU 16 GLU 17 LYS 18 ASP 19 SER 20 ASN 21 VAL 22 VAL 23 LEU 24 THR 25 THR 26 GLN 27 ARG 28 ASP 29 PRO 30 SER 31 THR 32 SER 33 ILE 34 PRO 35 ALA 36 PRO 37 VAL 38 SER 39 VAL 40 LYS 41 TRP 42 SER 43 ARG 44 TRP 46 THR 47 SER 48 ASN 49 ASP 50 VAL 51 VAL 52 ASP 53 ASP 54 TYR 55 ALA 56 THR 57 ILE 58 THR 59 SER 60 ARG 61 TRP 62 TYR 63 GLN 64 ILE 65 ALA 66 GLU 67 PHE 68 VAL 69 TRP 70 SER 71 LYS 72 ASP 73 ASP 74 PRO 75 PHE 76 ASP 77 LYS 78 GLU 79 LEU 80 ALA 81 ARG 82 LEU 83 ILE 84 LEU 85 PRO 86 ARG 87 ALA 88 LEU 89 LEU 90 SER 91 SER 92 ILE 93 GLU 94 ALA 95 ASN 96 SER 97 ASP 98 ALA 99 ILE 100 CYS 101 ASP 102 VAL 103 PRO 104 ASN 105 THR 106 ILE 107 PRO 108 PHE 109 LYS 110 VAL 111 HIS 112 ALA 113 TYR 114 TRP 115 ARG 116 GLY 117 ASP 118 MET 119 GLU 120 VAL 121 ARG 122 VAL 123 GLN 124 ILE 125 ASN 126 SER 127 ASN 128 LYS 129 PHE 130 GLN 131 VAL 132 GLY 133 GLN 134 LEU 135 GLN 136 ALA 137 THR 138 TRP 139 TYR 140 TYR 141 SER 142 ASP 143 HIS 144 GLU 145 ASN 146 LEU 147 ASN 148 ILE 149 SER 150 SER 151 LYS 152 ARG 153 SER 154 VAL 155 TYR 156 GLY 157 PHE 158 SER 159 GLN 160 MET 161 ASP 162 HIS 163 ALA 164 LEU 165 ILE 166 SER 167 ALA 168 SER 169 ALA 170 SER 171 ASN 172 GLU 173 ALA 174 LYS 175 LEU 176 VAL 177 ILE 178 PRO 179 PHE 180 LYS 181 HIS 182 VAL 183 TYR 184 PRO 185 PHE 186 LEU 187 PRO 188 THR 189 ARG 190 ILE 191 VAL 192 PRO 193 ASP 194 TRP 195 THR 196 THR 197 GLY 198 ILE 199 LEU 200 ASP 201 MET 202 GLY 203 ALA 204 LEU 205 ASN 206 ILE 207 ARG 208 VAL 209 ILE 210 ALA 211 PRO 212 LEU 213 ARG 214 MET 215 SER 216 ALA 217 THR 218 GLY 219 PRO 220 THR 221 THR 222 CYS 223 ASN 224 VAL 225 VAL 226 VAL 227 PHE 228 ILE 229 LYS 230 LEU 231 ASN 232 ASN 233 SER 234 GLU 235 PHE 236 THR 237 GLY 238 THR 239 SER 240 SER 241 GLY 242 LYS 243 PHE 244 TYR 245 ALA 246 SER 247 GLN 248 ILE 249 ARG 250 ALA 251
Unit 3	ASN 2 PRO 3 SER 4 TYR 5 GLN 6 GLN 7 SER 8 PRO 9 ARG 10 HIS 11 PHE 12 VAL 13 PRO 14 THR 15 GLY 16 MET 17 HIS 18 SER 19 LEU 20 ALA 21 LEU 22 GLY 23 THR 24 ASN 25 LEU 26 VAL 27 GLU 28 PRO 29 LEU 30 HIS 31 ALA 32 LEU 33 ARG 34 LEU 35 ASP 36 ALA 37 ALA 38 GLY 39 THR 40 THR 41 GLN 42 HIS 43 PRO 44 VAL 45 GLY 46 CYS 47 ALA 48 PRO 49 ASP 50 GLU 51 ASP 52 MET 53 THR 54 VAL 55 SER 56 SER 57 ILE 58 ALA 59 SER 60 ARG 61 TYR 62 GLY 63 LEU 64 ILE 65 ARG 66 ARG 67 VAL 68 GLN 69 TRP 70 LYS 71 LYS 72 ASP 73 HIS 74 ALA 75 LYS 76 GLY 77 SER 78 LEU 79 LEU 80 LEU 81 GLN 82 LEU 83 ASP 84 ALA 85 ASP 86 PRO 87 PHE 88 VAL 89 GLU 90 GLN 91 ARG 92 ILE 93 GLU 94 GLY 95 THR 96 ASN 97 PRO 98 ILE 99 SER 100 LEU 101 TYR 102 TRP 103 PHE 104 ALA 105 PRO 106 VAL 107 GLY 108 VAL 109 VAL 110 SER 111 SER 112 MET 113 PHE 114 MET 115 GLN 116 TRP 117 ARG 118 GLY 119 SER 120 LEU 121 GLU 122 TYR 123 ARG 124 PHE 125 ASP 126 ILE 127 ILE 128 ALA 129 SER 130 GLN 131 PHE 132 HIS 133 THR 134 GLY 135 ARG 136 LEU 137 ILE 138 VAL 139 GLY 140 TYR 141 VAL 142 PRO 143 GLY 144 LEU 145 THR 146 ALA 147 SER 148 LEU 149 GLN 150 LEU 151 GLN 152 MET 153 ASP 154 TYR 155 MET 156 LYS 157 LEU 158 LYS 159 SER 160 SER 161 SER 162 TYR 163 VAL 164 VAL 165 PHE 166 ASP 167 LEU 168 GLN 169 GLU 170 SER 171 ASN 172 SER 173 PHE 174 THR 175 PHE 176 GLU 177 VAL 178 PRO 179 TYR 180 VAL 181 SER 182 TYR 183 ARG 184 PRO 185 TRP 186 TRP 187 VAL 188 ARG 189 LYS 190 TYR 191 GLY 192 GLY 193 ASN 194 TYR 195 LEU 196 PRO 197 SER 198 SER 199 THR 200 ASP 201 ALA 202 PRO 203 SER 204 THR 205 LEU 206 PHE 207 MET 208 TYR 209 VAL 210 GLN 211 VAL 212 PRO 213 LEU 214 ILE 215 PRO 216 MET 217 GLU 218 ALA 219 VAL 220 SER 221 ASP 222 THR 223 ILE 224 ASP 225 ILE 226 ASN 227 VAL 228 TYR 229 VAL 230 ARG 231 GLY 232 GLY 233 SER 234 SER 235 PHE 236 GLU 237 VAL 238 CYS 239 VAL 240 PRO 241 VAL 242 GLN 243 PRO 244 SER 245 LEU 246 GLY 247 LEU 248 ASN 249 TRP 250 ASN 251 THR 252 ASP 253 PHE 254 ILE 255 LEU 256 ARG 257 ASN 258 ASP 259 GLU 260 GLU 261 TYR 262 ARG 263 ALA 264 LYS 265 THR 266 GLY 267 TYR 268 ALA 269 PRO 270 TYR 271 TYR 272 ALA 273 GLY 274 VAL 275 TRP 276 HIS 277 SER 278 PHE 279 ASN 280 ASN 281 SER 282 ASN 283 SER 284 LEU 285 VAL 286 PHE 287 ARG 288 TRP 289 GLY 290 SER 291 ALA 292 SER 293 ASP 294 GLN 295 ILE 296 ALA 297 GLN 298 TRP 299 PRO 300 THR 301 ILE 302 SER 303 VAL 304 PRO 305 ARG 306 GLY 307 GLU 308 LEU 309 ALA 310 PHE 311 LEU 312 ARG 313 ILE 314 LYS 315 ASP 316 GLY 317 LYS 318 GLN 319 ALA 320 ALA 321 VAL 322 GLY 323 THR 324 GLN 325 PRO 326 TRP 327 ARG 328 THR 329 MET 330 VAL 331 VAL 332 TRP 333 PRO 334 SER 335 GLY 336 HIS 337 GLY 338 TYR 339 ASN 340 ILE 341 GLY 342 ILE 343 PRO 344 THR 345 TYR 346 ASN 347 ALA 348 GLU 349 ARG 350 ALA 351 ARG 352 GLN 353 LEU 354 ALA 355 GLN 356 HIS 357 LEU 358 TYR 359 GLY 360 GLY 361 GLY 362 SER 363 LEU 364 THR 365 ASP 366 GLU 367 LYS 368 ALA 369 LYS 370 GLN 371 LEU 372 PHE 373 VAL 374 PRO 375 ALA 376 ASN 377 GLN 378 GLN 379 GLY 380 PRO 381 GLY 382 LYS 383 VAL 384 SER 385 ASN 386 GLY 387 ASN 388 PRO 389 VAL 390 TRP 391 GLU 392 VAL 393 MET 394 ARG 395 ALA 396 PRO 397 LEU 398

Ligands

Unit 4

U5P 1399