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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF A S-SELECTIVE TRANSAMINASE FROM BACILLUS MEGATERIUM BOUND WITH R-ALPHA-METHYLBENZYLAMINE
Keywords TRANSFERASE, TRANSAMINASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5G09     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSAMINASE  A 469 3688 0
2  Protein   TRANSAMINASE  B 471 3709 0
3  Protein   TRANSAMINASE  C 469 3688 0
4  Protein   TRANSAMINASE  D 473 3724 0
5  Ligand   TRANSAMINASE  A 5 0 70
6  Ligand   TRANSAMINASE  B 3 0 44
7  Ligand   TRANSAMINASE  C 4 0 54
8  Ligand   TRANSAMINASE  D 4 0 57
9 Water     918 0 918
total       2816 14809 1143
Proteins
Unit 1 LYS7 ILE8 ASN9 TRP10 GLU11 GLN12 VAL13 LYS14 GLU15 TRP16 ASP17 ARG18 LYS19 TYR20 LEU21 MET22 ARG23 THR24 PHE25 SER26 THR27 GLN28 ASN29 GLU30 TYR31 GLN32 PRO33 VAL34 PRO35 ILE36 GLU37 SER38 THR39 GLU40 GLY41 ASP42 TYR43 LEU44 ILE45 MET46 PRO47 ASP48 GLY49 THR50 ARG51 LEU52 LEU53 ASP54 PHE55 PHE56 ASN57 GLN58 LEU59 TYR60 CYS61 VAL62 ASN63 LEU64 GLY65 GLN66 LYS67 ASN68 GLN69 LYS70 VAL71 ASN72 ALA73 ALA74 ILE75 LYS76 GLU77 ALA78 LEU79 ASP80 ARG81 TYR82 GLY83 PHE84 VAL85 TRP86 ASP87 THR88 TYR89 ALA90 THR91 ASP92 TYR93 LYS94 ALA95 LYS96 ALA97 ALA98 LYS99 ILE100 ILE101 ILE102 GLU103 ASP104 ILE105 LEU106 GLY107 ASP108 GLU109 ASP110 TRP111 PRO112 GLY113 LYS114 VAL115 ARG116 PHE117 VAL118 SER119 THR120 GLY121 SER122 GLU123 ALA124 VAL125 GLU126 THR127 ALA128 LEU129 ASN130 ILE131 ALA132 ARG133 LEU134 TYR135 THR136 ASN137 ARG138 PRO139 LEU140 VAL141 VAL142 THR143 ARG144 GLU145 HIS146 ASP147 TYR148 HIS149 GLY150 TRP151 THR152 GLY153 GLY154 ALA155 ALA156 THR157 VAL158 THR159 ARG160 LEU161 ARG162 SER163 TYR164 ARG165 SER166 GLY167 LEU168 VAL169 GLY170 GLU171 ASN172 SER173 GLU174 SER175 PHE176 SER177 ALA178 GLN179 ILE180 PRO181 GLY182 SER183 SER184 TYR185 ASN186 SER187 ALA188 VAL189 LEU190 MET191 ALA192 PRO193 SER194 PRO195 ASN196 MET197 PHE198 GLN199 ASP200 SER201 ASP202 GLY203 ASN204 LEU205 LEU206 LYS207 ASP208 GLU209 ASN210 GLY211 GLU212 LEU213 LEU214 SER215 VAL216 LYS217 TYR218 THR219 ARG220 ARG221 MET222 ILE223 GLU224 ASN225 TYR226 GLY227 PRO228 GLU229 GLN230 VAL231 ALA232 ALA233 VAL234 ILE235 THR236 GLU237 VAL238 SER239 GLN240 GLY241 ALA242 GLY243 SER244 ALA245 MET246 PRO247 PRO248 TYR249 GLU250 TYR251 ILE252 PRO253 GLN254 ILE255 ARG256 LYS257 MET258 THR259 LYS260 GLU261 LEU262 GLY263 VAL264 LEU265 TRP266 ILE267 ASN268 ASP269 GLU270 VAL271 LEU272 THR273 GLY274 PHE275 GLY276 ARG277 THR278 GLY279 LYS280 TRP281 PHE282 GLY283 TYR284 GLN285 HIS286 TYR287 GLY288 VAL289 GLN290 PRO291 ASP292 ILE293 ILE294 THR295 MET296 GLY297 LYS298 GLY299 LEU300 SER301 SER302 SER303 SER304 LEU305 PRO306 ALA307 GLY308 ALA309 VAL310 LEU311 VAL312 SER313 LYS314 GLU315 ILE316 ALA317 ALA318 PHE319 MET320 ASP321 LYS322 HIS323 ARG324 TRP325 GLU326 SER327 VAL328 SER329 THR330 TYR331 ALA332 GLY333 HIS334 PRO335 VAL336 ALA337 MET338 ALA339 ALA340 VAL341 CYS342 ALA343 ASN344 LEU345 GLU346 VAL347 MET348 MET349 GLU350 GLU351 ASN352 PHE353 VAL354 GLU355 GLN356 ALA357 LYS358 ASP359 SER360 GLY361 GLU362 TYR363 ILE364 ARG365 SER366 LYS367 LEU368 GLU369 LEU370 LEU371 GLN372 GLU373 LYS374 HIS375 LYS376 SER377 ILE378 GLY379 ASN380 PHE381 ASP382 GLY383 TYR384 GLY385 LEU386 LEU387 TRP388 ILE389 VAL390 ASP391 ILE392 VAL393 ASN394 ALA395 LYS396 THR397 LYS398 THR399 PRO400 TYR401 VAL402 LYS403 LEU404 ASP405 ARG406 ASN407 PHE408 THR409 HIS410 GLY411 MET412 ASN413 PRO414 ASN415 GLN416 ILE417 PRO418 THR419 GLN420 ILE421 ILE422 MET423 LYS424 LYS425 ALA426 LEU427 GLU428 LYS429 GLY430 VAL431 LEU432 ILE433 GLY434 GLY435 VAL436 MET437 PRO438 ASN439 THR440 MET441 ARG442 ILE443 GLY444 ALA445 SER446 LEU447 ASN448 VAL449 SER450 ARG451 GLY452 ASP453 ILE454 ASP455 LYS456 ALA457 MET458 ASP459 ALA460 LEU461 ASP462 TYR463 ALA464 LEU465 ASP466 TYR467 LEU468 GLU469 SER470 GLY471 GLU472 TRP473 GLN474 ALA475
Unit 2 LEU3 THR4 VAL5 GLN6 LYS7 ILE8 ASN9 TRP10 GLU11 GLN12 VAL13 LYS14 GLU15 TRP16 ASP17 ARG18 LYS19 TYR20 LEU21 MET22 ARG23 THR24 PHE25 SER26 THR27 GLN28 ASN29 GLU30 TYR31 GLN32 PRO33 VAL34 PRO35 ILE36 GLU37 SER38 THR39 GLU40 GLY41 ASP42 TYR43 LEU44 ILE45 MET46 PRO47 ASP48 GLY49 THR50 ARG51 LEU52 LEU53 ASP54 PHE55 PHE56 ASN57 GLN58 LEU59 TYR60 CYS61 VAL62 ASN63 LEU64 GLY65 GLN66 LYS67 ASN68 GLN69 LYS70 VAL71 ASN72 ALA73 ALA74 ILE75 LYS76 GLU77 ALA78 LEU79 ASP80 ARG81 TYR82 GLY83 PHE84 VAL85 TRP86 ASP87 THR88 TYR89 ALA90 THR91 ASP92 TYR93 LYS94 ALA95 LYS96 ALA97 ALA98 LYS99 ILE100 ILE101 ILE102 GLU103 ASP104 ILE105 LEU106 GLY107 ASP108 GLU109 ASP110 TRP111 PRO112 GLY113 LYS114 VAL115 ARG116 PHE117 VAL118 SER119 THR120 GLY121 SER122 GLU123 ALA124 VAL125 GLU126 THR127 ALA128 LEU129 ASN130 ILE131 ALA132 ARG133 LEU134 TYR135 THR136 ASN137 ARG138 PRO139 LEU140 VAL141 VAL142 THR143 ARG144 GLU145 HIS146 ASP147 TYR148 HIS149 GLY150 TRP151 THR152 GLY153 GLY154 ALA155 ALA156 THR157 VAL158 THR159 ARG160 LEU161 ARG162 SER163 TYR164 ARG165 SER166 GLY167 LEU168 VAL169 GLY170 GLU171 ASN172 SER173 GLU174 SER175 PHE176 SER177 ALA178 GLN179 ILE180 PRO181 GLY182 SER183 SER184 TYR185 ASN186 SER187 ALA188 VAL189 LEU190 MET191 ALA192 PRO193 SER194 PRO195 ASN196 MET197 PHE198 GLN199 ASP200 SER201 ASP202 GLY203 ASN204 LEU205 LEU206 LYS207 ASP208 GLU209 ASN210 GLY211 GLU212 LEU213 LEU214 SER215 VAL216 LYS217 TYR218 THR219 ARG220 ARG221 MET222 ILE223 GLU224 ASN225 TYR226 GLY227 PRO228 GLU229 GLN230 VAL231 ALA232 ALA233 VAL234 ILE235 THR236 GLU237 VAL238 SER239 GLN240 GLY241 ALA242 GLY243 SER244 ALA245 MET246 PRO247 PRO248 TYR249 GLU250 TYR251 ILE252 PRO253 GLN254 ILE255 ARG256 LYS257 MET258 THR259 LYS260 GLU261 LEU262 GLY263 VAL264 LEU265 TRP266 ILE267 ASN268 ASP269 GLU270 VAL271 LEU272 THR273 GLY274 PHE275 GLY276 ARG277 THR278 GLY279 LYS280 TRP281 PHE282 GLY283 TYR284 GLN285 HIS286 TYR287 GLY288 VAL289 GLN290 PRO291 ASP292 ILE293 ILE294 THR295 MET296 GLY297 LYS298 GLY299 LEU300 SER301 SER302 SER303 SER304 LEU305 PRO306 ALA307 GLY308 ALA309 VAL310 LEU311 VAL312 SER313 LYS314 GLU315 ILE316 ALA317 ALA318 PHE319 MET320 ASP321 LYS322 HIS323 ARG324 TRP325 GLU326 SER327 VAL328 SER329 THR330 TYR331 ALA332 GLY333 HIS334 PRO335 VAL336 ALA337 MET338 ALA339 ALA340 VAL341 CYS342 ALA343 ASN344 LEU345 GLU346 VAL347 MET348 MET349 GLU350 GLU351 ASN352 PHE353 VAL354 GLU355 GLN356 ALA357 LYS358 ASP359 SER360 GLY361 GLU362 TYR363 ILE364 ARG365 SER366 LYS367 LEU368 GLU369 LEU370 LEU371 GLN372 GLU373 LYS374 HIS375 LYS376 SER377 ILE378 GLY379 ASN380 PHE381 ASP382 GLY383 TYR384 GLY385 LEU386 LEU387 TRP388 ILE389 VAL390 ASP391 ILE392 VAL393 ASN394 ALA395 LYS396 THR397 LYS398 THR399 PRO400 TYR401 VAL402 LYS403 LEU404 ASP405 ARG406 ASN407 PHE408 THR409 HIS410 GLY411 MET412 ASN413 PRO414 ASN415 GLN416 ILE417 PRO418 THR419 GLN420 ILE421 ILE422 MET423 LYS424 LYS425 ALA426 LEU427 GLU428 LYS429 GLY430 VAL431 LEU432 ILE433 GLY434 GLY435 VAL436 MET437 PRO438 ASN439 THR440 MET441 ARG442 ILE443 GLY444 ALA445 SER446 LEU447 ASN448 VAL449 SER450 ARG451 GLY452 ASP453 ILE454 ASP455 LYS456 ALA457 MET458 ASP459 ALA460 LEU461 ASP462 TYR463 ALA464 LEU465 ASP466 TYR467 LEU468 GLU469 SER470 GLY471 GLU472 TRP473
Unit 3 LYS7 ILE8 ASN9 TRP10 GLU11 GLN12 VAL13 LYS14 GLU15 TRP16 ASP17 ARG18 LYS19 TYR20 LEU21 MET22 ARG23 THR24 PHE25 SER26 THR27 GLN28 ASN29 GLU30 TYR31 GLN32 PRO33 VAL34 PRO35 ILE36 GLU37 SER38 THR39 GLU40 GLY41 ASP42 TYR43 LEU44 ILE45 MET46 PRO47 ASP48 GLY49 THR50 ARG51 LEU52 LEU53 ASP54 PHE55 PHE56 ASN57 GLN58 LEU59 TYR60 CYS61 VAL62 ASN63 LEU64 GLY65 GLN66 LYS67 ASN68 GLN69 LYS70 VAL71 ASN72 ALA73 ALA74 ILE75 LYS76 GLU77 ALA78 LEU79 ASP80 ARG81 TYR82 GLY83 PHE84 VAL85 TRP86 ASP87 THR88 TYR89 ALA90 THR91 ASP92 TYR93 LYS94 ALA95 LYS96 ALA97 ALA98 LYS99 ILE100 ILE101 ILE102 GLU103 ASP104 ILE105 LEU106 GLY107 ASP108 GLU109 ASP110 TRP111 PRO112 GLY113 LYS114 VAL115 ARG116 PHE117 VAL118 SER119 THR120 GLY121 SER122 GLU123 ALA124 VAL125 GLU126 THR127 ALA128 LEU129 ASN130 ILE131 ALA132 ARG133 LEU134 TYR135 THR136 ASN137 ARG138 PRO139 LEU140 VAL141 VAL142 THR143 ARG144 GLU145 HIS146 ASP147 TYR148 HIS149 GLY150 TRP151 THR152 GLY153 GLY154 ALA155 ALA156 THR157 VAL158 THR159 ARG160 LEU161 ARG162 SER163 TYR164 ARG165 SER166 GLY167 LEU168 VAL169 GLY170 GLU171 ASN172 SER173 GLU174 SER175 PHE176 SER177 ALA178 GLN179 ILE180 PRO181 GLY182 SER183 SER184 TYR185 ASN186 SER187 ALA188 VAL189 LEU190 MET191 ALA192 PRO193 SER194 PRO195 ASN196 MET197 PHE198 GLN199 ASP200 SER201 ASP202 GLY203 ASN204 LEU205 LEU206 LYS207 ASP208 GLU209 ASN210 GLY211 GLU212 LEU213 LEU214 SER215 VAL216 LYS217 TYR218 THR219 ARG220 ARG221 MET222 ILE223 GLU224 ASN225 TYR226 GLY227 PRO228 GLU229 GLN230 VAL231 ALA232 ALA233 VAL234 ILE235 THR236 GLU237 VAL238 SER239 GLN240 GLY241 ALA242 GLY243 SER244 ALA245 MET246 PRO247 PRO248 TYR249 GLU250 TYR251 ILE252 PRO253 GLN254 ILE255 ARG256 LYS257 MET258 THR259 LYS260 GLU261 LEU262 GLY263 VAL264 LEU265 TRP266 ILE267 ASN268 ASP269 GLU270 VAL271 LEU272 THR273 GLY274 PHE275 GLY276 ARG277 THR278 GLY279 LYS280 TRP281 PHE282 GLY283 TYR284 GLN285 HIS286 TYR287 GLY288 VAL289 GLN290 PRO291 ASP292 ILE293 ILE294 THR295 MET296 GLY297 LYS298 GLY299 LEU300 SER301 SER302 SER303 SER304 LEU305 PRO306 ALA307 GLY308 ALA309 VAL310 LEU311 VAL312 SER313 LYS314 GLU315 ILE316 ALA317 ALA318 PHE319 MET320 ASP321 LYS322 HIS323 ARG324 TRP325 GLU326 SER327 VAL328 SER329 THR330 TYR331 ALA332 GLY333 HIS334 PRO335 VAL336 ALA337 MET338 ALA339 ALA340 VAL341 CYS342 ALA343 ASN344 LEU345 GLU346 VAL347 MET348 MET349 GLU350 GLU351 ASN352 PHE353 VAL354 GLU355 GLN356 ALA357 LYS358 ASP359 SER360 GLY361 GLU362 TYR363 ILE364 ARG365 SER366 LYS367 LEU368 GLU369 LEU370 LEU371 GLN372 GLU373 LYS374 HIS375 LYS376 SER377 ILE378 GLY379 ASN380 PHE381 ASP382 GLY383 TYR384 GLY385 LEU386 LEU387 TRP388 ILE389 VAL390 ASP391 ILE392 VAL393 ASN394 ALA395 LYS396 THR397 LYS398 THR399 PRO400 TYR401 VAL402 LYS403 LEU404 ASP405 ARG406 ASN407 PHE408 THR409 HIS410 GLY411 MET412 ASN413 PRO414 ASN415 GLN416 ILE417 PRO418 THR419 GLN420 ILE421 ILE422 MET423 LYS424 LYS425 ALA426 LEU427 GLU428 LYS429 GLY430 VAL431 LEU432 ILE433 GLY434 GLY435 VAL436 MET437 PRO438 ASN439 THR440 MET441 ARG442 ILE443 GLY444 ALA445 SER446 LEU447 ASN448 VAL449 SER450 ARG451 GLY452 ASP453 ILE454 ASP455 LYS456 ALA457 MET458 ASP459 ALA460 LEU461 ASP462 TYR463 ALA464 LEU465 ASP466 TYR467 LEU468 GLU469 SER470 GLY471 GLU472 TRP473 GLN474 ALA475
Unit 4 SER2 LEU3 THR4 VAL5 GLN6 LYS7 ILE8 ASN9 TRP10 GLU11 GLN12 VAL13 LYS14 GLU15 TRP16 ASP17 ARG18 LYS19 TYR20 LEU21 MET22 ARG23 THR24 PHE25 SER26 THR27 GLN28 ASN29 GLU30 TYR31 GLN32 PRO33 VAL34 PRO35 ILE36 GLU37 SER38 THR39 GLU40 GLY41 ASP42 TYR43 LEU44 ILE45 MET46 PRO47 ASP48 GLY49 THR50 ARG51 LEU52 LEU53 ASP54 PHE55 PHE56 ASN57 GLN58 LEU59 TYR60 CYS61 VAL62 ASN63 LEU64 GLY65 GLN66 LYS67 ASN68 GLN69 LYS70 VAL71 ASN72 ALA73 ALA74 ILE75 LYS76 GLU77 ALA78 LEU79 ASP80 ARG81 TYR82 GLY83 PHE84 VAL85 TRP86 ASP87 THR88 TYR89 ALA90 THR91 ASP92 TYR93 LYS94 ALA95 LYS96 ALA97 ALA98 LYS99 ILE100 ILE101 ILE102 GLU103 ASP104 ILE105 LEU106 GLY107 ASP108 GLU109 ASP110 TRP111 PRO112 GLY113 LYS114 VAL115 ARG116 PHE117 VAL118 SER119 THR120 GLY121 SER122 GLU123 ALA124 VAL125 GLU126 THR127 ALA128 LEU129 ASN130 ILE131 ALA132 ARG133 LEU134 TYR135 THR136 ASN137 ARG138 PRO139 LEU140 VAL141 VAL142 THR143 ARG144 GLU145 HIS146 ASP147 TYR148 HIS149 GLY150 TRP151 THR152 GLY153 GLY154 ALA155 ALA156 THR157 VAL158 THR159 ARG160 LEU161 ARG162 SER163 TYR164 ARG165 SER166 GLY167 LEU168 VAL169 GLY170 GLU171 ASN172 SER173 GLU174 SER175 PHE176 SER177 ALA178 GLN179 ILE180 PRO181 GLY182 SER183 SER184 TYR185 ASN186 SER187 ALA188 VAL189 LEU190 MET191 ALA192 PRO193 SER194 PRO195 ASN196 MET197 PHE198 GLN199 ASP200 SER201 ASP202 GLY203 ASN204 LEU205 LEU206 LYS207 ASP208 GLU209 ASN210 GLY211 GLU212 LEU213 LEU214 SER215 VAL216 LYS217 TYR218 THR219 ARG220 ARG221 MET222 ILE223 GLU224 ASN225 TYR226 GLY227 PRO228 GLU229 GLN230 VAL231 ALA232 ALA233 VAL234 ILE235 THR236 GLU237 VAL238 SER239 GLN240 GLY241 ALA242 GLY243 SER244 ALA245 MET246 PRO247 PRO248 TYR249 GLU250 TYR251 ILE252 PRO253 GLN254 ILE255 ARG256 LYS257 MET258 THR259 LYS260 GLU261 LEU262 GLY263 VAL264 LEU265 TRP266 ILE267 ASN268 ASP269 GLU270 VAL271 LEU272 THR273 GLY274 PHE275 GLY276 ARG277 THR278 GLY279 LYS280 TRP281 PHE282 GLY283 TYR284 GLN285 HIS286 TYR287 GLY288 VAL289 GLN290 PRO291 ASP292 ILE293 ILE294 THR295 MET296 GLY297 LYS298 GLY299 LEU300 SER301 SER302 SER303 SER304 LEU305 PRO306 ALA307 GLY308 ALA309 VAL310 LEU311 VAL312 SER313 LYS314 GLU315 ILE316 ALA317 ALA318 PHE319 MET320 ASP321 LYS322 HIS323 ARG324 TRP325 GLU326 SER327 VAL328 SER329 THR330 TYR331 ALA332 GLY333 HIS334 PRO335 VAL336 ALA337 MET338 ALA339 ALA340 VAL341 CYS342 ALA343 ASN344 LEU345 GLU346 VAL347 MET348 MET349 GLU350 GLU351 ASN352 PHE353 VAL354 GLU355 GLN356 ALA357 LYS358 ASP359 SER360 GLY361 GLU362 TYR363 ILE364 ARG365 SER366 LYS367 LEU368 GLU369 LEU370 LEU371 GLN372 GLU373 LYS374 HIS375 LYS376 SER377 ILE378 GLY379 ASN380 PHE381 ASP382 GLY383 TYR384 GLY385 LEU386 LEU387 TRP388 ILE389 VAL390 ASP391 ILE392 VAL393 ASN394 ALA395 LYS396 THR397 LYS398 THR399 PRO400 TYR401 VAL402 LYS403 LEU404 ASP405 ARG406 ASN407 PHE408 THR409 HIS410 GLY411 MET412 ASN413 PRO414 ASN415 GLN416 ILE417 PRO418 THR419 GLN420 ILE421 ILE422 MET423 LYS424 LYS425 ALA426 LEU427 GLU428 LYS429 GLY430 VAL431 LEU432 ILE433 GLY434 GLY435 VAL436 MET437 PRO438 ASN439 THR440 MET441 ARG442 ILE443 GLY444 ALA445 SER446 LEU447 ASN448 VAL449 SER450 ARG451 GLY452 ASP453 ILE454 ASP455 LYS456 ALA457 MET458 ASP459 ALA460 LEU461 ASP462 TYR463 ALA464 LEU465 ASP466 TYR467 LEU468 GLU469 SER470 GLY471 GLU472 TRP473 GLN474
Ligands
Unit 5 6DF1475 PGE1476 PGE1477 1PE1478 PGE1479
Unit 6 6DF1474 PGE1475 PGE1476
Unit 7 6DF1475 PGE1476 PGE1477 PGE1480
Unit 8 PG41475 6DF1476 PEG1477 PG41480
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany