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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN JMJD1C
Keywords OXIDOREDUCTASE, JMJD1C
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FZO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLA  PROT EIN 2C  A 339 2681 8
2  Protein   PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLA  PROT EIN 2C  B 339 2641 8
3  Ligand   PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLA  PROT EIN 2C  A 2 0 2
4  Ligand   PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLA  PROT EIN 2C  B 5 0 14
5 Water     502 0 502
total       1187 5322 534

Proteins
Unit 1 MET0 ILE2157 PRO2158 HIS2159 SER2160 TRP2161 ILE2162 CYS2163 GLU2164 LYS2165 HIS2166 ILE2167 LEU2168 TRP2169 LEU2170 LYS2171 ASP2172 TYR2173 LYS2174 ASN2175 SER2176 SER2177 ASN2178 TRP2179 LYS2180 LEU2181 PHE2182 LYS2183 GLU2184 CYS2185 TRP2186 LYS2187 GLN2188 GLY2189 GLN2190 PRO2191 ALA2192 VAL2193 VAL2194 SER2195 GLY2196 VAL2197 HIS2198 LYS2199 LYS2200 MET2201 ASN2202 ILE2203 SER2204 LEU2205 TRP2206 LYS2207 ALA2208 GLU2209 SER2210 ILE2211 SER2212 LEU2213 ASP2214 PHE2215 GLY2216 ASP2217 HIS2218 GLN2219 ALA2220 ASP2221 LEU2222 LEU2223 ASN2224 CYS2225 LYS2226 ASP2227 SER2228 ILE2229 ILE2230 SER2231 ASN2232 ALA2233 ASN2234 VAL2235 LYS2236 GLU2237 PHE2238 TRP2239 ASP2240 GLY2241 PHE2242 GLU2243 GLU2244 VAL2245 SER2246 LYS2247 ARG2248 GLN2249 LYS2250 GLU2255 THR2256 VAL2257 VAL2258 LEU2259 LYS2260 LEU2261 LYS2262 ASP2263 TRP2264 PRO2265 SER2266 GLY2267 GLU2268 ASP2269 PHE2270 LYS2271 THR2272 MET2273 MET2274 PRO2275 ALA2276 ARG2277 TYR2278 GLU2279 ASP2280 LEU2281 LEU2282 LYS2283 SER2284 LEU2285 PRO2286 LEU2287 PRO2288 GLU2289 TYR2290 CYS2291 ASN2292 PRO2293 GLU2294 GLY2295 LYS2296 PHE2297 ASN2298 LEU2299 ALA2300 SER2301 HIS2302 LEU2303 PRO2304 GLY2305 PHE2306 PHE2307 VAL2308 ARG2309 PRO2310 ASP2311 LEU2312 GLY2313 PRO2314 ARG2315 LEU2316 CSD2317 SER2318 ALA2319 TYR2320 GLY2321 VAL2322 VAL2323 ALA2324 ALA2325 LYS2326 ASP2327 HIS2328 ASP2329 ILE2330 GLY2331 THR2332 THR2333 ASN2334 LEU2335 HIS2336 ILE2337 GLU2338 VAL2339 SER2340 ASP2341 VAL2342 VAL2343 ASN2344 ILE2345 LEU2346 VAL2347 TYR2348 VAL2349 GLY2350 ILE2351 ALA2352 LYS2353 GLY2354 ASN2355 GLY2356 ILE2357 LEU2358 SER2359 LYS2360 ALA2361 GLY2362 ILE2363 LEU2364 LYS2365 LYS2366 PHE2367 GLU2368 GLU2369 GLU2370 ASP2371 LEU2372 ASP2373 ASP2374 ILE2375 LEU2376 ARG2377 LYS2378 ARG2379 LEU2380 LYS2381 ASP2382 SER2383 SER2384 GLU2385 ILE2386 PRO2387 GLY2388 ALA2389 LEU2390 TRP2391 HIS2392 ILE2393 TYR2394 ALA2395 GLY2396 LYS2397 ASP2398 VAL2399 ASP2400 LYS2401 ILE2402 ARG2403 GLU2404 PHE2405 LEU2406 GLN2407 LYS2408 ILE2409 SER2410 LYS2411 GLU2412 GLN2413 GLY2414 LEU2415 GLU2416 VAL2417 LEU2418 PRO2419 GLU2420 HIS2421 ASP2422 PRO2423 ILE2424 ARG2425 ASP2426 GLN2427 SER2428 TRP2429 TYR2430 VAL2431 ASN2432 LYS2433 LYS2434 LEU2435 ARG2436 GLN2437 ARG2438 LEU2439 LEU2440 GLU2441 GLU2442 TYR2443 GLY2444 VAL2445 ARG2446 THR2447 CYS2448 THR2449 LEU2450 ILE2451 GLN2452 PHE2453 LEU2454 GLY2455 ASP2456 ALA2457 ILE2458 VAL2459 LEU2460 PRO2461 ALA2462 GLY2463 ALA2464 LEU2465 HIS2466 GLN2467 VAL2468 GLN2469 ASN2470 PHE2471 HIS2472 SER2473 CYS2474 ILE2475 GLN2476 VAL2477 THR2478 GLU2479 ASP2480 PHE2481 VAL2482 SER2483 PRO2484 GLU2485 HIS2486 LEU2487 VAL2488 GLU2489 SER2490 PHE2491 HIS2492 LEU2493 THR2494 GLN2495 GLU2496 LEU2497 ARG2498
Unit 2 MET0 ILE2157 PRO2158 HIS2159 SER2160 TRP2161 ILE2162 CYS2163 GLU2164 LYS2165 HIS2166 ILE2167 LEU2168 TRP2169 LEU2170 LYS2171 ASP2172 TYR2173 LYS2174 ASN2175 SER2176 SER2177 ASN2178 TRP2179 LYS2180 LEU2181 PHE2182 LYS2183 GLU2184 CYS2185 TRP2186 LYS2187 GLN2188 GLY2189 GLN2190 PRO2191 ALA2192 VAL2193 VAL2194 SER2195 GLY2196 VAL2197 HIS2198 LYS2199 LYS2200 MET2201 ASN2202 ILE2203 SER2204 LEU2205 TRP2206 LYS2207 ALA2208 GLU2209 SER2210 ILE2211 SER2212 LEU2213 ASP2214 PHE2215 GLY2216 ASP2217 HIS2218 GLN2219 ALA2220 ASP2221 LEU2222 LEU2223 ASN2224 CYS2225 LYS2226 ASP2227 SER2228 ILE2229 ILE2230 SER2231 ASN2232 ALA2233 ASN2234 VAL2235 LYS2236 GLU2237 PHE2238 TRP2239 ASP2240 GLY2241 PHE2242 GLU2243 GLU2244 VAL2245 SER2246 LYS2247 ARG2248 GLN2249 LYS2250 GLU2255 THR2256 VAL2257 VAL2258 LEU2259 LYS2260 LEU2261 LYS2262 ASP2263 TRP2264 PRO2265 SER2266 GLY2267 GLU2268 ASP2269 PHE2270 LYS2271 THR2272 MET2273 MET2274 PRO2275 ALA2276 ARG2277 TYR2278 GLU2279 ASP2280 LEU2281 LEU2282 LYS2283 SER2284 LEU2285 PRO2286 LEU2287 PRO2288 GLU2289 TYR2290 CYS2291 ASN2292 PRO2293 GLU2294 GLY2295 LYS2296 PHE2297 ASN2298 LEU2299 ALA2300 SER2301 HIS2302 LEU2303 PRO2304 GLY2305 PHE2306 PHE2307 VAL2308 ARG2309 PRO2310 ASP2311 LEU2312 GLY2313 PRO2314 ARG2315 LEU2316 CSD2317 SER2318 ALA2319 TYR2320 GLY2321 VAL2322 VAL2323 ALA2324 ALA2325 LYS2326 ASP2327 HIS2328 ASP2329 ILE2330 GLY2331 THR2332 THR2333 ASN2334 LEU2335 HIS2336 ILE2337 GLU2338 VAL2339 ASP2340 ASP2341 VAL2342 VAL2343 ASN2344 ILE2345 LEU2346 VAL2347 TYR2348 VAL2349 GLY2350 ILE2351 ALA2352 LYS2353 GLY2354 ASN2355 GLY2356 ILE2357 LEU2358 SER2359 LYS2360 ALA2361 GLY2362 ILE2363 LEU2364 LYS2365 LYS2366 PHE2367 GLU2368 GLU2369 GLU2370 ASP2371 LEU2372 ASP2373 ASP2374 ILE2375 LEU2376 ARG2377 LYS2378 ARG2379 LEU2380 LYS2381 ASP2382 SER2383 SER2384 GLU2385 ILE2386 PRO2387 GLY2388 ALA2389 LEU2390 TRP2391 HIS2392 ILE2393 TYR2394 ALA2395 GLY2396 LYS2397 ASP2398 VAL2399 ASP2400 LYS2401 ILE2402 ARG2403 GLU2404 PHE2405 LEU2406 GLN2407 LYS2408 ILE2409 SER2410 LYS2411 GLU2412 GLN2413 GLY2414 LEU2415 GLU2416 VAL2417 LEU2418 PRO2419 GLU2420 HIS2421 ASP2422 PRO2423 ILE2424 ARG2425 ASP2426 GLN2427 SER2428 TRP2429 TYR2430 VAL2431 ASN2432 LYS2433 LYS2434 LEU2435 ARG2436 GLN2437 ARG2438 LEU2439 LEU2440 GLU2441 GLU2442 TYR2443 GLY2444 VAL2445 ARG2446 THR2447 CYS2448 THR2449 LEU2450 ILE2451 GLN2452 PHE2453 LEU2454 GLY2455 ASP2456 ALA2457 ILE2458 VAL2459 LEU2460 PRO2461 ALA2462 GLY2463 ALA2464 LEU2465 HIS2466 GLN2467 VAL2468 GLN2469 ASN2470 PHE2471 HIS2472 SER2473 CYS2474 ILE2475 GLN2476 VAL2477 THR2478 GLU2479 ASP2480 PHE2481 VAL2482 SER2483 PRO2484 GLU2485 HIS2486 LEU2487 VAL2488 GLU2489 SER2490 PHE2491 HIS2492 LEU2493 THR2494 GLN2495 GLU2496 LEU2497 ARG2498

Ligands
Unit 3 MN3499 CL3500
Unit 4 MN3499 CL3500 EDO3501 EDO3502 EDO3503

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany