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Sequence, Chains, Asymmetric and Biological Units

Title NATIVELY MEMBRANE-ANCHORED FULL-LENGTH HERPES SIMPLEX VIRUS GLYCOPROTEIN B
Keywords VIRAL PROTEIN, MEMBRANE FUSION, CLASS III FUSOGEN, PRE-FUSIO
Experiment ELECTRON MICROSCOPY
Number of Models  4

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5FZ2     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ENVELOPE GLYCOPROTEIN B  A 336 2728 0
2  Protein   ENVELOPE GLYCOPROTEIN B  B 336 2732 0
3  Protein   ENVELOPE GLYCOPROTEIN B  C 336 2732 0
total       1008 8192 0
Proteins
Unit 1 TYR142 THR143 GLU144 GLY145 ILE146 ALA147 VAL148 VAL149 PHE150 LYS151 GLU152 ASN153 ILE154 ALA155 PRO156 TYR157 LYS158 PHE159 LYS160 ALA161 THR162 MET163 TYR164 TYR165 LYS166 ASP167 VAL168 THR169 VAL170 SER171 GLN172 VAL173 TRP174 PHE175 GLY176 HIS177 ARG178 TYR179 SER180 GLN181 PHE182 MET183 GLY184 ILE185 PHE186 GLU187 ASP188 ARG189 ALA190 PRO191 VAL192 PRO193 PHE194 GLU195 GLU196 VAL197 ILE198 ASP199 LYS200 ILE201 ASN202 ALA203 LYS204 GLY205 VAL206 CYS207 ARG208 SER209 THR210 ALA211 LYS212 TYR213 VAL214 ARG215 ASN216 ASN217 LEU218 GLU219 THR220 THR221 ALA222 PHE223 HIS224 ARG225 ASP226 ASP227 HIS228 GLU229 THR230 ASP231 MET232 GLU233 LEU234 LYS235 PRO236 ALA237 ASN238 ALA239 ALA240 THR241 ARG242 THR243 SER244 ARG245 GLY246 TRP247 HIS248 THR249 THR250 ASP251 LEU252 LYS253 TYR254 ASN255 PRO256 SER257 ARG258 VAL259 GLU260 ALA261 PHE262 HIS263 ARG264 TYR265 GLY266 THR267 THR268 VAL269 ASN270 CYS271 ILE272 VAL273 GLU274 GLU275 VAL276 ASP277 ALA278 ARG279 SER280 VAL281 TYR282 PRO283 TYR284 ASP285 GLU286 PHE287 VAL288 LEU289 ALA290 THR291 GLY292 ASP293 PHE294 VAL295 TYR296 MET297 SER298 PRO299 PHE300 TYR301 GLY302 TYR303 ARG304 GLU305 GLY306 SER307 HIS308 THR309 GLU310 HIS311 THR312 THR313 TYR314 ALA315 ALA316 ASP317 ARG318 PHE319 LYS320 GLN321 VAL322 ASP323 GLY324 PHE325 TYR326 ALA327 ARG328 ASP329 LEU330 THR331 THR332 LYS333 ALA334 ARG335 ALA336 THR337 ALA338 PRO339 THR340 THR341 ARG342 ASN343 LEU344 LEU345 THR346 THR347 PRO348 LYS349 PHE350 THR351 VAL352 ALA353 TRP354 ASP355 TRP356 VAL357 PRO358 LYS359 ARG360 PRO361 SER362 VAL363 CYS364 THR365 MET366 THR367 LYS368 TRP369 GLN370 GLU371 VAL372 ASP373 GLU374 MET375 LEU376 ARG377 SER378 GLU379 TYR380 GLY381 GLY382 SER383 PHE384 ARG385 PHE386 SER387 SER388 ASP389 ALA390 ILE391 SER392 THR393 THR394 PHE395 THR396 THR397 ASN398 LEU399 THR400 GLU401 TYR402 PRO403 LEU404 SER405 ARG406 VAL407 ASP408 LEU409 GLY410 ASP411 CYS412 ILE413 GLY414 LYS415 ASP416 ALA417 ARG418 ASP419 ALA420 MET421 ASP422 ARG423 ILE424 PHE425 ALA426 ARG427 ARG428 TYR429 ASN430 ALA431 THR432 HIS433 ILE434 LYS435 VAL436 GLY437 GLN438 PRO439 GLN440 TYR441 TYR442 GLN443 ALA444 ASN445 GLY446 GLY447 PHE448 LEU449 ILE450 ALA451 TYR452 GLN453 PRO454 LEU455 LEU456 SER457 ASN458 THR459 LEU460 ALA461 GLU462 LEU463 TYR464 VAL465 ARG466 GLU467 HIS468 LEU469 ARG470 GLU471 GLN472 SER473 ARG474 LYS475 PRO476 PRO477
Unit 2 TYR142 THR143 GLU144 GLY145 ILE146 ALA147 VAL148 VAL149 PHE150 LYS151 GLU152 ASN153 ILE154 ALA155 PRO156 TYR157 LYS158 PHE159 LYS160 ALA161 THR162 MET163 TYR164 TYR165 LYS166 ASP167 VAL168 THR169 VAL170 SER171 GLN172 VAL173 TRP174 PHE175 GLY176 HIS177 ARG178 TYR179 SER180 GLN181 PHE182 MET183 GLY184 ILE185 PHE186 GLU187 ASP188 ARG189 ALA190 PRO191 VAL192 PRO193 PHE194 GLU195 GLU196 VAL197 ILE198 ASP199 LYS200 ILE201 ASN202 ALA203 LYS204 GLY205 VAL206 CYS207 ARG208 SER209 THR210 ALA211 LYS212 TYR213 VAL214 ARG215 ASN216 ASN217 LEU218 GLU219 THR220 THR221 ALA222 PHE223 HIS224 ARG225 ASP226 ASP227 HIS228 GLU229 THR230 ASP231 MET232 GLU233 LEU234 LYS235 PRO236 ALA237 ASN238 ALA239 ALA240 THR241 ARG242 THR243 SER244 ARG245 GLY246 TRP247 HIS248 THR249 THR250 ASP251 LEU252 LYS253 TYR254 ASN255 PRO256 SER257 ARG258 VAL259 GLU260 ALA261 PHE262 HIS263 ARG264 TYR265 GLY266 THR267 THR268 VAL269 ASN270 CYS271 ILE272 VAL273 GLU274 GLU275 VAL276 ASP277 ALA278 ARG279 SER280 VAL281 TYR282 PRO283 TYR284 ASP285 GLU286 PHE287 VAL288 LEU289 ALA290 THR291 GLY292 ASP293 PHE294 VAL295 TYR296 MET297 SER298 PRO299 PHE300 TYR301 GLY302 TYR303 ARG304 GLU305 GLY306 SER307 HIS308 THR309 GLU310 HIS311 THR312 THR313 TYR314 ALA315 ALA316 ASP317 ARG318 PHE319 LYS320 GLN321 VAL322 ASP323 GLY324 PHE325 TYR326 ALA327 ARG328 ASP329 LEU330 THR331 THR332 LYS333 ALA334 ARG335 ALA336 THR337 ALA338 PRO339 THR340 THR341 ARG342 ASN343 LEU344 LEU345 THR346 THR347 PRO348 LYS349 PHE350 THR351 VAL352 ALA353 TRP354 ASP355 TRP356 VAL357 PRO358 LYS359 ARG360 PRO361 SER362 VAL363 CYS364 THR365 MET366 THR367 LYS368 TRP369 GLN370 GLU371 VAL372 ASP373 GLU374 MET375 LEU376 ARG377 SER378 GLU379 TYR380 GLY381 GLY382 SER383 PHE384 ARG385 PHE386 SER387 SER388 ASP389 ALA390 ILE391 SER392 THR393 THR394 PHE395 THR396 THR397 ASN398 LEU399 THR400 GLU401 TYR402 PRO403 LEU404 SER405 ARG406 VAL407 ASP408 LEU409 GLY410 ASP411 CYS412 ILE413 GLY414 LYS415 ASP416 ALA417 ARG418 ASP419 ALA420 MET421 ASP422 ARG423 ILE424 PHE425 ALA426 ARG427 ARG428 TYR429 ASN430 ALA431 THR432 HIS433 ILE434 LYS435 VAL436 GLY437 GLN438 PRO439 GLN440 TYR441 TYR442 GLN443 ALA444 ASN445 GLY446 GLY447 PHE448 LEU449 ILE450 ALA451 TYR452 GLN453 PRO454 LEU455 LEU456 SER457 ASN458 THR459 LEU460 ALA461 GLU462 LEU463 TYR464 VAL465 ARG466 GLU467 HIS468 LEU469 ARG470 GLU471 GLN472 SER473 ARG474 LYS475 PRO476 PRO477
Unit 3 TYR142 THR143 GLU144 GLY145 ILE146 ALA147 VAL148 VAL149 PHE150 LYS151 GLU152 ASN153 ILE154 ALA155 PRO156 TYR157 LYS158 PHE159 LYS160 ALA161 THR162 MET163 TYR164 TYR165 LYS166 ASP167 VAL168 THR169 VAL170 SER171 GLN172 VAL173 TRP174 PHE175 GLY176 HIS177 ARG178 TYR179 SER180 GLN181 PHE182 MET183 GLY184 ILE185 PHE186 GLU187 ASP188 ARG189 ALA190 PRO191 VAL192 PRO193 PHE194 GLU195 GLU196 VAL197 ILE198 ASP199 LYS200 ILE201 ASN202 ALA203 LYS204 GLY205 VAL206 CYS207 ARG208 SER209 THR210 ALA211 LYS212 TYR213 VAL214 ARG215 ASN216 ASN217 LEU218 GLU219 THR220 THR221 ALA222 PHE223 HIS224 ARG225 ASP226 ASP227 HIS228 GLU229 THR230 ASP231 MET232 GLU233 LEU234 LYS235 PRO236 ALA237 ASN238 ALA239 ALA240 THR241 ARG242 THR243 SER244 ARG245 GLY246 TRP247 HIS248 THR249 THR250 ASP251 LEU252 LYS253 TYR254 ASN255 PRO256 SER257 ARG258 VAL259 GLU260 ALA261 PHE262 HIS263 ARG264 TYR265 GLY266 THR267 THR268 VAL269 ASN270 CYS271 ILE272 VAL273 GLU274 GLU275 VAL276 ASP277 ALA278 ARG279 SER280 VAL281 TYR282 PRO283 TYR284 ASP285 GLU286 PHE287 VAL288 LEU289 ALA290 THR291 GLY292 ASP293 PHE294 VAL295 TYR296 MET297 SER298 PRO299 PHE300 TYR301 GLY302 TYR303 ARG304 GLU305 GLY306 SER307 HIS308 THR309 GLU310 HIS311 THR312 THR313 TYR314 ALA315 ALA316 ASP317 ARG318 PHE319 LYS320 GLN321 VAL322 ASP323 GLY324 PHE325 TYR326 ALA327 ARG328 ASP329 LEU330 THR331 THR332 LYS333 ALA334 ARG335 ALA336 THR337 ALA338 PRO339 THR340 THR341 ARG342 ASN343 LEU344 LEU345 THR346 THR347 PRO348 LYS349 PHE350 THR351 VAL352 ALA353 TRP354 ASP355 TRP356 VAL357 PRO358 LYS359 ARG360 PRO361 SER362 VAL363 CYS364 THR365 MET366 THR367 LYS368 TRP369 GLN370 GLU371 VAL372 ASP373 GLU374 MET375 LEU376 ARG377 SER378 GLU379 TYR380 GLY381 GLY382 SER383 PHE384 ARG385 PHE386 SER387 SER388 ASP389 ALA390 ILE391 SER392 THR393 THR394 PHE395 THR396 THR397 ASN398 LEU399 THR400 GLU401 TYR402 PRO403 LEU404 SER405 ARG406 VAL407 ASP408 LEU409 GLY410 ASP411 CYS412 ILE413 GLY414 LYS415 ASP416 ALA417 ARG418 ASP419 ALA420 MET421 ASP422 ARG423 ILE424 PHE425 ALA426 ARG427 ARG428 TYR429 ASN430 ALA431 THR432 HIS433 ILE434 LYS435 VAL436 GLY437 GLN438 PRO439 GLN440 TYR441 TYR442 GLN443 ALA444 ASN445 GLY446 GLY447 PHE448 LEU449 ILE450 ALA451 TYR452 GLN453 PRO454 LEU455 LEU456 SER457 ASN458 THR459 LEU460 ALA461 GLU462 LEU463 TYR464 VAL465 ARG466 GLU467 HIS468 LEU469 ARG470 GLU471 GLN472 SER473 ARG474 LYS475 PRO476 PRO477
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany