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Sequence, Chains, Asymmetric and Biological Units

Title 2.07 A RESOLUTION 1,4-BENZOQUINONE INHIBITED SPOROSARCINA PA UREASE
Keywords HYDROLASE, UREASE, SPOROSARCINA PASTEURII, NICKEL, METALLOEN 4-BENZOQUINONE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FSE     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UREASE SUBUNIT GAMMA  A 100 766 11
2  Protein   UREASE SUBUNIT BETA  B 122 951 0
3  Protein   UREASE SUBUNIT ALPHA  C 570 4306 12
4  Ligand   UREASE SUBUNIT GAMMA  A 2 0 9
5  Ligand   UREASE SUBUNIT BETA  B 2 0 9
6  Ligand   UREASE SUBUNIT ALPHA  C 20 0 86
7 Water     464 0 464
total       1280 6023 591

Proteins
Unit 1 CXM1 HIS2 LEU3 ASN4 PRO5 ALA6 GLU7 LYS8 GLU9 LYS10 LEU11 GLN12 ILE13 PHE14 LEU15 ALA16 SER17 GLU18 LEU19 ALA20 LEU21 LYS22 ARG23 LYS24 ALA25 ARG26 GLY27 LEU28 LYS29 LEU30 ASN31 TYR32 PRO33 GLU34 ALA35 VAL36 ALA37 ILE38 ILE39 THR40 SER41 PHE42 ILE43 MET44 GLU45 GLY46 ALA47 ARG48 ASP49 GLY50 LYS51 THR52 VAL53 ALA54 MET55 LEU56 MET57 GLU58 GLU59 GLY60 LYS61 HIS62 VAL63 LEU64 THR65 ARG66 ASP67 ASP68 VAL69 MET70 GLU71 GLY72 VAL73 PRO74 GLU75 MET76 ILE77 ASP78 ASP79 ILE80 GLN81 ALA82 GLU83 ALA84 THR85 PHE86 PRO87 ASP88 GLY89 THR90 LYS91 LEU92 VAL93 THR94 VAL95 HIS96 ASN97 PRO98 ILE99 SER100
Unit 2 ASN5 TYR6 ILE7 VAL8 PRO9 GLY10 GLU11 TYR12 ARG13 VAL14 ALA15 GLU16 GLY17 GLU18 ILE19 GLU20 ILE21 ASN22 ALA23 GLY24 ARG25 GLU26 LYS27 THR28 THR29 ILE30 ARG31 VAL32 SER33 ASN34 THR35 GLY36 ASP37 ARG38 PRO39 ILE40 GLN41 VAL42 GLY43 SER44 HIS45 ILE46 HIS47 PHE48 VAL49 GLU50 VAL51 ASN52 LYS53 GLU54 LEU55 LEU56 PHE57 ASP58 ARG59 ALA60 GLU61 GLY62 ILE63 GLY64 ARG65 ARG66 LEU67 ASN68 ILE69 PRO70 SER71 GLY72 THR73 ALA74 ALA75 ARG76 PHE77 GLU78 PRO79 GLY80 GLU81 GLU82 MET83 GLU84 VAL85 GLU86 LEU87 THR88 GLU89 LEU90 GLY91 GLY92 ASN93 ARG94 GLU95 VAL96 PHE97 GLY98 ILE99 SER100 ASP101 LEU102 THR103 ASN104 GLY105 SER106 VAL107 ASP108 ASN109 LYS110 GLU111 LEU112 ILE113 LEU114 GLN115 ARG116 ALA117 LYS118 GLU119 LEU120 GLY121 TYR122 LYS123 GLY124 VAL125 GLU126
Unit 3 MET1 LYS2 ILE3 ASN4 ARG5 GLN6 GLN7 TYR8 ALA9 GLU10 SER11 TYR12 GLY13 PRO14 THR15 VAL16 GLY17 ASP18 GLN19 VAL20 ARG21 LEU22 ALA23 ASP24 THR25 ASP26 LEU27 TRP28 ILE29 GLU30 VAL31 GLU32 LYS33 ASP34 TYR35 THR36 THR37 TYR38 GLY39 ASP40 GLU41 ALA42 ASN43 PHE44 GLY45 GLY46 GLY47 LYS48 VAL49 LEU50 ARG51 GLU52 GLY53 MET54 GLY55 GLU56 ASN57 GLY58 THR59 TYR60 THR61 ARG62 THR63 GLU64 ASN65 VAL66 LEU67 ASP68 LEU69 LEU70 LEU71 THR72 ASN73 ALA74 LEU75 ILE76 LEU77 ASP78 TYR79 THR80 GLY81 ILE82 TYR83 LYS84 ALA85 ASP86 ILE87 GLY88 VAL89 LYS90 ASP91 GLY92 TYR93 ILE94 VAL95 GLY96 ILE97 GLY98 LYS99 GLY100 GLY101 ASN102 PRO103 ASP104 ILE105 MET106 ASP107 GLY108 VAL109 THR110 PRO111 ASN112 MET113 ILE114 VAL115 GLY116 THR117 ALA118 THR119 GLU120 VAL121 ILE122 ALA123 ALA124 GLU125 GLY126 LYS127 ILE128 VAL129 THR130 ALA131 GLY132 GLY133 ILE134 ASP135 THR136 HIS137 VAL138 HIS139 PHE140 ILE141 ASN142 PRO143 ASP144 GLN145 VAL146 ASP147 VAL148 ALA149 LEU150 ALA151 ASN152 GLY153 ILE154 THR155 THR156 LEU157 PHE158 GLY159 GLY160 GLY161 THR162 GLY163 PRO164 ALA165 GLU166 GLY167 SER168 LYS169 ALA170 THR171 THR172 VAL173 THR174 PRO175 GLY176 PRO177 TRP178 ASN179 ILE180 GLU181 LYS182 MET183 LEU184 LYS185 SER186 THR187 GLU188 GLY189 LEU190 PRO191 ILE192 ASN193 VAL194 GLY195 ILE196 LEU197 GLY198 LYS199 GLY200 HIS201 GLY202 SER203 SER204 ILE205 ALA206 PRO207 ILE208 MET209 GLU210 GLN211 ILE212 ASP213 ALA214 GLY215 ALA216 ALA217 GLY218 LEU219 KCX220 ILE221 HIS222 GLU223 ASP224 TRP225 GLY226 ALA227 THR228 PRO229 ALA230 SER231 ILE232 ASP233 ARG234 SER235 LEU236 THR237 VAL238 ALA239 ASP240 GLU241 ALA242 ASP243 VAL244 GLN245 VAL246 ALA247 ILE248 HIS249 SER250 ASP251 THR252 LEU253 ASN254 GLU255 ALA256 GLY257 PHE258 LEU259 GLU260 ASP261 THR262 LEU263 ARG264 ALA265 ILE266 ASN267 GLY268 ARG269 VAL270 ILE271 HIS272 SER273 PHE274 HIS275 VAL276 GLU277 GLY278 ALA279 GLY280 GLY281 GLY282 HIS283 ALA284 PRO285 ASP286 ILE287 MET288 ALA289 MET290 ALA291 GLY292 HIS293 PRO294 ASN295 VAL296 LEU297 PRO298 SER299 SER300 THR301 ASN302 PRO303 THR304 ARG305 PRO306 PHE307 THR308 VAL309 ASN310 THR311 ILE312 ASP313 GLU314 HIS315 LEU316 ASP317 MET318 LEU319 MET320 VAL321 CYS322 HIS323 HIS324 LEU325 LYS326 GLN327 ASN328 ILE329 PRO330 GLU331 ASP332 VAL333 ALA334 PHE335 ALA336 ASP337 SER338 ARG339 ILE340 ARG341 PRO342 GLU343 THR344 ILE345 ALA346 ALA347 GLU348 ASP349 ILE350 LEU351 HIS352 ASP353 LEU354 GLY355 ILE356 ILE357 SER358 MET359 MET360 SER361 THR362 ASP363 ALA364 LEU365 ALA366 MET367 GLY368 ARG369 ALA370 GLY371 GLU372 MET373 VAL374 LEU375 ARG376 THR377 TRP378 GLN379 THR380 ALA381 ASP382 LYS383 MET384 LYS385 LYS386 GLN387 ARG388 GLY389 PRO390 LEU391 ALA392 GLU393 GLU394 LYS395 ASN396 GLY397 SER398 ASP399 ASN400 PHE401 ARG402 ALA403 LYS404 ARG405 TYR406 VAL407 SER408 LYS409 TYR410 THR411 ILE412 ASN413 PRO414 ALA415 ILE416 ALA417 GLN418 GLY419 ILE420 ALA421 HIS422 GLU423 VAL424 GLY425 SER426 ILE427 GLU428 GLU429 GLY430 LYS431 PHE432 ALA433 ASP434 LEU435 VAL436 LEU437 TRP438 GLU439 PRO440 LYS441 PHE442 PHE443 GLY444 VAL445 LYS446 ALA447 ASP448 ARG449 VAL450 ILE451 LYS452 GLY453 GLY454 ILE455 ILE456 ALA457 TYR458 ALA459 GLN460 ILE461 GLY462 ASP463 PRO464 SER465 ALA466 SER467 ILE468 PRO469 THR470 PRO471 GLN472 PRO473 VAL474 MET475 GLY476 ARG477 ARG478 MET479 TYR480 GLY481 THR482 VAL483 GLY484 ASP485 LEU486 ILE487 HIS488 ASP489 THR490 ASN491 ILE492 THR493 PHE494 MET495 SER496 LYS497 SER498 SER499 ILE500 GLN501 GLN502 GLY503 VAL504 PRO505 ALA506 LYS507 LEU508 GLY509 LEU510 LYS511 ARG512 ARG513 ILE514 GLY515 THR516 VAL517 LYS518 ASN519 CYS520 ARG521 ASN522 ILE523 GLY524 LYS525 LYS526 ASP527 MET528 LYS529 TRP530 ASN531 ASP532 VAL533 THR534 THR535 ASP536 ILE537 ASP538 ILE539 ASN540 PRO541 GLU542 THR543 TYR544 GLU545 VAL546 LYS547 VAL548 ASP549 GLY550 GLU551 VAL552 LEU553 THR554 CYS555 GLU556 PRO557 VAL558 LYS559 GLU560 LEU561 PRO562 MET563 ALA564 GLN565 ARG566 TYR567 PHE568 LEU569 PHE570

Ligands
Unit 4 EDO1101 SO41102
Unit 5 EDO1127 SO41128
Unit 6 NI600 NI601 EDO1571 EDO1572 EDO1573 EDO1574 EDO1575 EDO1576 EDO1577 EDO1578 SO41579 OH1580 SO41581 SO41582 HQE1583 HQE1584 SO41585 SO41586 SO41587 SO41588

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany