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Title | STRUCTURE OF BACTERIAL DNA LIGASE WITH SMALL-MOLECULE LIGAND 1H-INDAZOL-7-AMINE (AT4213) IN AN ALTERNATE BINDING SITE. | |
Keywords | LIGASE, ANTIBIOTIC DESIGN, PROTEIN-LIGAND COMPLEX, FRAGMENT SCREENING, ALTERNATE BINDING SITE, AT4213. | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5FPO | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | DNA LIGASE | A | 306 | 2390 | 0 |
2 | Ligand | DNA LIGASE | A | 3 | 0 | 51 |
3 | Water | 231 | 0 | 231 | ||
total | 540 | 2390 | 282 |
Unit 1 | ASP3 LEU4 SER5 SER6 ARG7 VAL8 ASN9 GLU10 LEU11 HIS12 ASP13 LEU14 LEU15 ASN16 GLN17 TYR18 SER19 TYR20 GLU21 TYR22 TYR23 VAL24 GLU25 ASP26 ASN27 PRO28 SER29 VAL30 PRO31 ASP32 SER33 GLU34 TYR35 ASP36 LYS37 LEU38 LEU39 HIS40 GLU41 LEU42 ILE43 LYS44 ILE45 GLU46 GLU47 GLU48 HIS49 PRO50 GLU51 TYR52 LYS53 THR54 VAL55 ASP56 SER57 PRO58 THR59 VAL60 ARG61 VAL62 GLY63 GLY64 GLU65 ALA66 GLN67 ALA68 SER69 PHE70 ASN71 LYS72 VAL73 ASN74 HIS75 ASP76 THR77 PRO78 MET79 LEU80 SER81 LEU82 GLY83 ASN84 ALA85 PHE86 ASN87 GLU88 ASP89 ASP90 LEU91 ARG92 LYS93 PHE94 ASP95 GLN96 ARG97 ILE98 ARG99 GLU100 GLN101 ILE102 GLY103 ASN104 VAL105 GLU106 TYR107 MET108 CYS109 GLU110 LEU111 LYS112 ILE113 ASP114 GLY115 LEU116 ALA117 VAL118 SER119 LEU120 LYS121 TYR122 VAL123 ASP124 GLY125 TYR126 PHE127 VAL128 GLN129 GLY130 LEU131 THR132 ARG133 GLY134 ASP135 GLY136 THR137 THR138 GLY139 GLU140 ASP141 ILE142 THR143 GLU144 ASN145 LEU146 LYS147 THR148 ILE149 HIS150 ALA151 ILE152 PRO153 LEU154 LYS155 MET156 LYS157 GLU158 PRO159 LEU160 ASN161 VAL162 GLU163 VAL164 ARG165 GLY166 GLU167 ALA168 TYR169 MET170 PRO171 ARG172 ARG173 SER174 PHE175 LEU176 ARG177 LEU178 ASN179 GLU180 GLU181 LYS182 GLU183 LYS184 ASN185 GLU187 GLN188 LEU189 PHE190 ALA191 ASN192 PRO193 ARG194 ASN195 ALA196 ALA197 ALA198 GLY199 SER200 LEU201 ARG202 GLN203 LEU204 ASP205 SER206 LYS207 LEU208 THR209 ALA210 LYS211 ARG212 LYS213 LEU214 SER215 VAL216 PHE217 ILE218 TYR219 SER220 VAL221 ASN222 ASP223 PHE224 THR225 ASP226 PHE227 ASN228 ALA229 ARG230 SER231 GLN232 SER233 GLU234 ALA235 LEU236 ASP237 GLU238 LEU239 ASP240 LYS241 LEU242 GLY243 PHE244 THR245 THR246 ASN247 LYS248 ASN249 ARG250 ALA251 ARG252 VAL253 ASN254 ASN255 ILE256 ASP257 GLY258 VAL259 LEU260 GLU261 TYR262 ILE263 GLU264 LYS265 TRP266 THR267 SER268 GLN269 ARG270 GLU271 SER272 LEU273 PRO274 TYR275 ASP276 ILE277 ASP278 GLY279 ILE280 VAL281 ILE282 LYS283 VAL284 ASN285 ASP286 LEU287 ASP288 GLN289 GLN290 ASP291 GLU292 MET293 GLY294 PHE295 THR296 GLN297 LYS298 SER299 PRO300 ARG301 TRP302 ALA303 ILE304 ALA305 TYR306 LYS307 PHE308 PRO309 |
Unit 2 | 10L1310 10L1311 10L1312 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |