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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE P.KNOWLESI CYTOSOLIC LEUCYL-TRNA SYNTHETASE EDITING DOMAIN
Keywords LIGASE, LEUCINE-TRNA LIGASE (LEURS) ACTIVITY, ATP + L-LEUCIN TRNA(LEUCINE) GIVES AMP + DIPHOSPHATE + L-LEUCYL-TRNA(LEUCI AMINOACYL-TRNA SYNTHETASE, PROTEIN BIOSYNTHESIS, NOVEL BORO INHIBITORS OF LEURS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5FOF     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LEUCYL-TRNA SYNTHETASE  A 302 2490 0
2  Protein   LEUCYL-TRNA SYNTHETASE  B 290 2387 0
3  Protein   LEUCYL-TRNA SYNTHETASE  C 299 2464 0
4  Protein   LEUCYL-TRNA SYNTHETASE  D 302 2490 0
5 Water     176 0 176
total       1369 9831 176
Proteins
Unit 1 LEU258 TYR259 PHE260 GLN261 GLY262 ALA263 MET264 GLY265 LYS266 CYS267 GLN268 GLU269 PHE270 THR271 LEU272 ILE273 LYS274 ILE275 TYR276 VAL277 HIS278 ASP279 TYR280 LYS281 GLU282 PHE283 TYR284 GLU285 ILE286 TYR287 LEU288 ARG289 ASN290 LYS291 LYS292 LEU293 GLU302 ASN303 VAL304 ASN305 GLU306 ASN307 PHE308 PHE309 SER310 GLN311 LYS312 LYS313 ILE314 ILE315 LEU316 LEU317 ALA318 SER319 THR320 LEU321 LYS322 PRO323 GLU324 THR325 ALA326 TYR327 GLY328 GLN329 ASN330 TYR331 THR332 PHE333 VAL334 ASN335 PRO336 GLY337 GLU338 TYR339 TYR340 TYR341 VAL342 THR343 LEU344 GLY345 PHE346 ASN347 LYS348 GLN349 ARG350 LEU351 HIS352 TYR353 GLY354 ASP355 LYS356 ASN357 TYR358 VAL359 ASN360 ASN361 VAL362 MET363 THR364 ARG365 ASP366 GLU367 ILE368 ILE369 ASP370 SER371 CYS372 GLU373 ASN374 VAL375 TYR376 ILE377 CYS378 SER379 GLU380 ASN381 SER382 LEU383 TYR384 ASN385 LEU386 ALA387 TYR388 GLN389 GLY390 VAL391 ILE392 PRO393 MET394 LEU395 SER396 LYS397 GLY398 SER399 SER400 PRO401 PHE402 SER403 ASP404 LEU405 LEU406 ILE407 LEU408 MET409 LYS410 ILE411 LYS412 GLY413 GLU414 GLU415 LEU416 VAL417 GLY418 LEU419 ARG420 THR421 TYR422 SER423 ASN424 LEU425 SER426 GLU427 LYS428 LYS429 ASP430 LEU431 TYR432 ILE433 LEU434 PRO435 MET436 THR437 THR438 ILE439 LYS440 MET441 ASN442 ILE443 ALA444 THR445 ALA446 ILE447 VAL448 PRO449 CYS450 VAL451 SER452 SER453 ASP454 SER455 ALA456 ASP457 ASP458 TYR459 ALA460 CYS461 LEU462 GLN463 ASP464 ILE465 ARG466 ARG467 LYS468 GLN469 ALA470 TYR471 TYR472 CYS473 GLU474 LYS475 TYR476 ASN477 LEU478 LYS479 ASP480 GLU481 PHE482 LEU483 HIS484 ASN485 GLU486 SER487 PHE488 SER489 CYS490 ILE491 GLN492 LEU493 PRO494 ASP495 ILE496 GLY497 ASP498 ASN499 THR500 GLY501 LYS502 TYR503 PHE504 TYR505 GLU506 MET507 GLU508 LYS509 ILE510 SER511 SER512 TYR513 LYS514 ASP515 ALA516 LYS517 LEU518 GLN519 LYS520 VAL521 LYS522 GLU523 THR524 LEU525 TYR526 LYS527 LYS528 GLN529 TYR530 PHE531 GLU532 GLY533 THR534 MET535 THR536 VAL537 GLU538 PRO539 TYR540 LYS541 GLY542 MET543 LYS544 ILE545 TYR546 ASN547 CYS548 ARG549 LYS550 LEU551 VAL552 LYS553 GLN554 TYR555 ILE556 ILE557 LYS558 ASN559 ASN560 GLU561 GLY562 PHE563 LEU564 TYR565 SER566 GLU567
Unit 2 LEU258 TYR259 PHE260 GLN261 GLY262 ALA263 MET264 GLY265 LYS266 CYS267 GLN268 GLU269 PHE270 THR271 LEU272 ILE273 LYS274 ILE275 TYR276 VAL277 HIS278 ASP279 TYR280 LYS281 GLU282 PHE283 TYR284 GLU285 ILE286 TYR287 LEU288 ARG289 ASN290 LYS291 GLU302 ASN303 VAL304 ASN305 GLU306 ASN307 PHE308 PHE309 SER310 GLN311 LYS312 LYS313 ILE314 ILE315 LEU316 LEU317 ALA318 SER319 THR320 LEU321 LYS322 PRO323 GLU324 THR325 ALA326 TYR327 GLY328 GLN329 ASN330 TYR331 THR332 PHE333 VAL334 ASN335 PRO336 GLY337 GLU338 TYR339 TYR340 TYR341 VAL342 THR343 LEU344 GLY345 PHE346 ASN347 LYS348 GLN349 ARG350 ASN361 VAL362 MET363 THR364 ARG365 ASP366 GLU367 ILE368 ILE369 ASP370 SER371 CYS372 GLU373 ASN374 VAL375 TYR376 ILE377 CYS378 SER379 GLU380 ASN381 SER382 LEU383 TYR384 ASN385 LEU386 ALA387 TYR388 GLN389 GLY390 VAL391 ILE392 PRO393 MET394 LEU395 SER396 LYS397 GLY398 SER399 SER400 PRO401 PHE402 SER403 ASP404 LEU405 LEU406 ILE407 LEU408 MET409 LYS410 ILE411 LYS412 GLY413 GLU414 GLU415 LEU416 VAL417 GLY418 LEU419 ARG420 THR421 TYR422 SER423 ASN424 LEU425 SER426 GLU427 LYS428 LYS429 ASP430 LEU431 TYR432 ILE433 LEU434 PRO435 MET436 THR437 THR438 ILE439 LYS440 MET441 ASN442 ILE443 ALA444 THR445 ALA446 ILE447 VAL448 PRO449 CYS450 VAL451 SER452 SER453 ASP454 SER455 ALA456 ASP457 ASP458 TYR459 ALA460 CYS461 LEU462 GLN463 ASP464 ILE465 ARG466 ARG467 LYS468 GLN469 ALA470 TYR471 TYR472 CYS473 GLU474 LYS475 TYR476 ASN477 LEU478 LYS479 ASP480 GLU481 PHE482 LEU483 HIS484 ASN485 GLU486 SER487 PHE488 SER489 CYS490 ILE491 GLN492 LEU493 PRO494 ASP495 ILE496 GLY497 ASP498 ASN499 THR500 GLY501 LYS502 TYR503 PHE504 TYR505 GLU506 MET507 GLU508 LYS509 ILE510 SER511 SER512 TYR513 LYS514 ASP515 ALA516 LYS517 LEU518 GLN519 LYS520 VAL521 LYS522 GLU523 THR524 LEU525 TYR526 LYS527 LYS528 GLN529 TYR530 PHE531 GLU532 GLY533 THR534 MET535 THR536 VAL537 GLU538 PRO539 TYR540 LYS541 GLY542 MET543 LYS544 ILE545 TYR546 ASN547 CYS548 ARG549 LYS550 LEU551 VAL552 LYS553 GLN554 TYR555 ILE556 ILE557 LYS558 ASN559 ASN560 GLU561 GLY562 PHE563 LEU564 TYR565 SER566 GLU567
Unit 3 LEU258 TYR259 PHE260 GLN261 GLY262 ALA263 MET264 GLY265 LYS266 CYS267 GLN268 GLU269 PHE270 THR271 LEU272 ILE273 LYS274 ILE275 TYR276 VAL277 HIS278 ASP279 TYR280 LYS281 GLU282 PHE283 TYR284 GLU285 ILE286 TYR287 LEU288 ARG289 ASN290 GLU302 ASN303 VAL304 ASN305 GLU306 ASN307 PHE308 PHE309 SER310 GLN311 LYS312 LYS313 ILE314 ILE315 LEU316 LEU317 ALA318 SER319 THR320 LEU321 LYS322 PRO323 GLU324 THR325 ALA326 TYR327 GLY328 GLN329 ASN330 TYR331 THR332 PHE333 VAL334 ASN335 PRO336 GLY337 GLU338 TYR339 TYR340 TYR341 VAL342 THR343 LEU344 GLY345 PHE346 ASN347 LYS348 GLN349 ARG350 LEU351 HIS352 TYR353 GLY354 ASP355 LYS356 ASN357 TYR358 VAL359 ASN360 ASN361 VAL362 MET363 THR364 ARG365 ASP366 GLU367 ILE368 ILE369 ASP370 SER371 CYS372 GLU373 ASN374 VAL375 TYR376 ILE377 CYS378 SER379 GLU380 ASN381 SER382 LEU383 TYR384 ASN385 LEU386 ALA387 TYR388 GLN389 GLY390 VAL391 ILE392 PRO393 MET394 LEU395 SER396 LYS397 GLY398 SER399 SER400 PRO401 PHE402 SER403 ASP404 LEU405 LEU406 ILE407 LEU408 MET409 LYS410 ILE411 LYS412 GLY413 GLU414 GLU415 LEU416 VAL417 GLY418 LEU419 ARG420 THR421 TYR422 SER423 ASN424 LEU425 SER426 GLU427 LYS428 LYS429 ASP430 LEU431 TYR432 ILE433 LEU434 PRO435 MET436 THR437 THR438 ILE439 LYS440 MET441 ASN442 ILE443 ALA444 THR445 ALA446 ILE447 VAL448 PRO449 CYS450 VAL451 SER452 SER453 ASP454 SER455 ALA456 ASP457 ASP458 TYR459 ALA460 CYS461 LEU462 GLN463 ASP464 ILE465 ARG466 ARG467 LYS468 GLN469 ALA470 TYR471 TYR472 CYS473 GLU474 LYS475 TYR476 ASN477 LEU478 LYS479 ASP480 GLU481 PHE482 LEU483 HIS484 ASN485 GLU486 SER487 PHE488 SER489 CYS490 ILE491 GLN492 LEU493 PRO494 ASP495 ILE496 GLY497 ASP498 ASN499 THR500 GLY501 LYS502 TYR503 PHE504 TYR505 GLU506 MET507 GLU508 LYS509 ILE510 SER511 SER512 TYR513 LYS514 ASP515 ALA516 LYS517 LEU518 GLN519 LYS520 VAL521 LYS522 GLU523 THR524 LEU525 TYR526 LYS527 LYS528 GLN529 TYR530 PHE531 GLU532 GLY533 THR534 MET535 THR536 VAL537 GLU538 PRO539 TYR540 LYS541 GLY542 MET543 LYS544 ILE545 TYR546 ASN547 CYS548 ARG549 LYS550 LEU551 VAL552 LYS553 GLN554 TYR555 ILE556 ILE557 LYS558 ASN559 ASN560 GLU561 GLY562 PHE563 LEU564 TYR565 SER566 GLU567
Unit 4 LEU258 TYR259 PHE260 GLN261 GLY262 ALA263 MET264 GLY265 LYS266 CYS267 GLN268 GLU269 PHE270 THR271 LEU272 ILE273 LYS274 ILE275 TYR276 VAL277 HIS278 ASP279 TYR280 LYS281 GLU282 PHE283 TYR284 GLU285 ILE286 TYR287 LEU288 ARG289 ASN290 LYS291 LYS292 LEU293 GLU302 ASN303 VAL304 ASN305 GLU306 ASN307 PHE308 PHE309 SER310 GLN311 LYS312 LYS313 ILE314 ILE315 LEU316 LEU317 ALA318 SER319 THR320 LEU321 LYS322 PRO323 GLU324 THR325 ALA326 TYR327 GLY328 GLN329 ASN330 TYR331 THR332 PHE333 VAL334 ASN335 PRO336 GLY337 GLU338 TYR339 TYR340 TYR341 VAL342 THR343 LEU344 GLY345 PHE346 ASN347 LYS348 GLN349 ARG350 LEU351 HIS352 TYR353 GLY354 ASP355 LYS356 ASN357 TYR358 VAL359 ASN360 ASN361 VAL362 MET363 THR364 ARG365 ASP366 GLU367 ILE368 ILE369 ASP370 SER371 CYS372 GLU373 ASN374 VAL375 TYR376 ILE377 CYS378 SER379 GLU380 ASN381 SER382 LEU383 TYR384 ASN385 LEU386 ALA387 TYR388 GLN389 GLY390 VAL391 ILE392 PRO393 MET394 LEU395 SER396 LYS397 GLY398 SER399 SER400 PRO401 PHE402 SER403 ASP404 LEU405 LEU406 ILE407 LEU408 MET409 LYS410 ILE411 LYS412 GLY413 GLU414 GLU415 LEU416 VAL417 GLY418 LEU419 ARG420 THR421 TYR422 SER423 ASN424 LEU425 SER426 GLU427 LYS428 LYS429 ASP430 LEU431 TYR432 ILE433 LEU434 PRO435 MET436 THR437 THR438 ILE439 LYS440 MET441 ASN442 ILE443 ALA444 THR445 ALA446 ILE447 VAL448 PRO449 CYS450 VAL451 SER452 SER453 ASP454 SER455 ALA456 ASP457 ASP458 TYR459 ALA460 CYS461 LEU462 GLN463 ASP464 ILE465 ARG466 ARG467 LYS468 GLN469 ALA470 TYR471 TYR472 CYS473 GLU474 LYS475 TYR476 ASN477 LEU478 LYS479 ASP480 GLU481 PHE482 LEU483 HIS484 ASN485 GLU486 SER487 PHE488 SER489 CYS490 ILE491 GLN492 LEU493 PRO494 ASP495 ILE496 GLY497 ASP498 ASN499 THR500 GLY501 LYS502 TYR503 PHE504 TYR505 GLU506 MET507 GLU508 LYS509 ILE510 SER511 SER512 TYR513 LYS514 ASP515 ALA516 LYS517 LEU518 GLN519 LYS520 VAL521 LYS522 GLU523 THR524 LEU525 TYR526 LYS527 LYS528 GLN529 TYR530 PHE531 GLU532 GLY533 THR534 MET535 THR536 VAL537 GLU538 PRO539 TYR540 LYS541 GLY542 MET543 LYS544 ILE545 TYR546 ASN547 CYS548 ARG549 LYS550 LEU551 VAL552 LYS553 GLN554 TYR555 ILE556 ILE557 LYS558 ASN559 ASN560 GLU561 GLY562 PHE563 LEU564 TYR565 SER566 GLU567
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany