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Title | CRYSTAL STRUCTURE OF HUMAN COMPLEMENT C3B IN COMPLEX WITH MC | |
Keywords | LIPID BINDING, LIPID BIANDING, COMPLEMENT SYSTEM, IMMUNE SYS PLASMA PROTEIN, COFA ACTIVITY, REGULATORS OF COMPLEMENT ACT | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 5FO8 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | COMPLEMENT C3 | A | 639 | 4979 | 0 |
2 | Protein | COMPLEMENT C3 | B | 894 | 7140 | 0 |
3 | Protein | MEMBRANE COFACTOR PROTEIN | C | 129 | 999 | 0 |
4 | Ligand | D | 2 | 0 | 28 | |
5 | Ligand | E | 3 | 0 | 39 | |
6 | Ligand | COMPLEMENT C3 | A | 4 | 0 | 16 |
7 | Ligand | COMPLEMENT C3 | B | 28 | 0 | 112 |
8 | Water | 492 | 0 | 492 | ||
total | 2191 | 13118 | 687 |
Unit 1 | SER23 PRO24 MET25 TYR26 SER27 ILE28 ILE29 THR30 PRO31 ASN32 ILE33 LEU34 ARG35 LEU36 GLU37 SER38 GLU39 GLU40 THR41 MET42 VAL43 LEU44 GLU45 ALA46 HIS47 ASP48 ALA49 GLN50 GLY51 ASP52 VAL53 PRO54 VAL55 THR56 VAL57 THR58 VAL59 HIS60 ASP61 PHE62 PRO63 GLY64 LYS65 LYS66 LEU67 VAL68 LEU69 SER70 SER71 GLU72 LYS73 THR74 VAL75 LEU76 THR77 PRO78 ALA79 THR80 ASN81 HIS82 MET83 GLY84 ASN85 VAL86 THR87 PHE88 THR89 ILE90 PRO91 ALA92 ASN93 ARG94 GLU99 LYS100 GLY101 ARG102 ASN103 LYS104 PHE105 VAL106 THR107 VAL108 GLN109 ALA110 THR111 PHE112 GLY113 THR114 GLN115 VAL116 VAL117 GLU118 LYS119 VAL120 VAL121 LEU122 VAL123 SER124 LEU125 GLN126 SER127 GLY128 TYR129 LEU130 PHE131 ILE132 GLN133 THR134 ASP135 LYS136 THR137 ILE138 TYR139 THR140 PRO141 GLY142 SER143 THR144 VAL145 LEU146 TYR147 ARG148 ILE149 PHE150 THR151 VAL152 ASN153 HIS154 LYS155 LEU156 LEU157 PRO158 VAL159 GLY160 ARG161 THR162 VAL163 MET164 VAL165 ASN166 ILE167 GLU168 ASN169 PRO170 GLU171 GLY172 ILE173 PRO174 VAL175 LYS176 GLN177 ASP178 SER179 LEU180 SER181 SER182 GLN183 ASN184 GLN185 LEU186 GLY187 VAL188 LEU189 PRO190 LEU191 SER192 TRP193 ASP194 ILE195 PRO196 GLU197 LEU198 VAL199 ASN200 MET201 GLY202 GLN203 TRP204 LYS205 ILE206 ARG207 ALA208 TYR209 TYR210 GLU211 ASN212 SER213 PRO214 GLN215 GLN216 VAL217 PHE218 SER219 THR220 GLU221 PHE222 GLU223 VAL224 LYS225 GLU226 TYR227 VAL228 LEU229 PRO230 SER231 PHE232 GLU233 VAL234 ILE235 VAL236 GLU237 PRO238 THR239 GLU240 LYS241 PHE242 TYR243 TYR244 ILE245 TYR246 ASN247 GLU248 LYS249 GLY250 LEU251 GLU252 VAL253 THR254 ILE255 THR256 ALA257 ARG258 PHE259 LEU260 TYR261 GLY262 LYS263 LYS264 VAL265 GLU266 GLY267 THR268 ALA269 PHE270 VAL271 ILE272 PHE273 GLY274 ILE275 GLN276 ASP277 GLY278 GLU279 GLN280 ARG281 ILE282 SER283 LEU284 PRO285 GLU286 SER287 LEU288 LYS289 ARG290 ILE291 PRO292 ILE293 GLU294 ASP295 GLY296 SER297 GLY298 GLU299 VAL300 VAL301 LEU302 SER303 ARG304 LYS305 VAL306 LEU307 LEU308 ASP309 GLY310 VAL311 GLN312 ASN313 PRO314 ARG315 ALA316 GLU317 ASP318 LEU319 VAL320 GLY321 LYS322 SER323 LEU324 TYR325 VAL326 SER327 ALA328 THR329 VAL330 ILE331 LEU332 HIS333 SER334 GLY335 SER336 ASP337 MET338 VAL339 GLN340 ALA341 GLU342 ARG343 SER344 GLY345 ILE346 PRO347 ILE348 VAL349 THR350 SER351 PRO352 TYR353 GLN354 ILE355 HIS356 PHE357 THR358 LYS359 THR360 PRO361 LYS362 TYR363 PHE364 LYS365 PRO366 GLY367 MET368 PRO369 PHE370 ASP371 LEU372 MET373 VAL374 PHE375 VAL376 THR377 ASN378 PRO379 ASP380 GLY381 SER382 PRO383 ALA384 TYR385 ARG386 VAL387 PRO388 VAL389 ALA390 VAL391 GLN392 GLY393 GLU394 ASP395 THR396 VAL397 GLN398 SER399 LEU400 THR401 GLN402 GLY403 ASP404 GLY405 VAL406 ALA407 LYS408 LEU409 SER410 ILE411 ASN412 THR413 HIS414 PRO415 SER416 GLN417 LYS418 PRO419 LEU420 SER421 ILE422 THR423 VAL424 ARG425 THR426 LYS427 LYS428 GLN429 GLU430 LEU431 SER432 GLU433 ALA434 GLU435 GLN436 ALA437 THR438 ARG439 THR440 MET441 GLN442 ALA443 LEU444 PRO445 TYR446 SER447 THR448 VAL449 GLY450 ASN451 SER452 ASN453 ASN454 TYR455 LEU456 HIS457 LEU458 SER459 VAL460 LEU461 ARG462 THR463 GLU464 LEU465 ARG466 PRO467 GLY468 GLU469 THR470 LEU471 ASN472 VAL473 ASN474 PHE475 LEU476 LEU477 ARG478 MET479 ASP480 ARG481 ALA482 HIS483 GLU484 ALA485 LYS486 ILE487 ARG488 TYR489 TYR490 THR491 TYR492 LEU493 ILE494 MET495 ASN496 LYS497 GLY498 ARG499 LEU500 LEU501 LYS502 ALA503 GLY504 ARG505 GLN506 VAL507 ARG508 GLU509 PRO510 GLY511 GLN512 ASP513 LEU514 VAL515 VAL516 LEU517 PRO518 LEU519 SER520 ILE521 THR522 THR523 ASP524 PHE525 ILE526 PRO527 SER528 PHE529 ARG530 LEU531 VAL532 ALA533 TYR534 TYR535 THR536 LEU537 ILE538 GLY539 ALA540 SER541 GLY542 GLN543 ARG544 GLU545 VAL546 VAL547 ALA548 ASP549 SER550 VAL551 TRP552 VAL553 ASP554 VAL555 LYS556 ASP557 SER558 CYS559 VAL560 GLY561 SER562 LEU563 VAL564 VAL565 LYS566 SER567 GLY568 GLN569 SER570 GLU571 ASP572 ARG573 GLN574 PRO575 VAL576 PRO577 GLY578 GLN579 GLN580 MET581 THR582 LEU583 LYS584 ILE585 GLU586 GLY587 ASP588 HIS589 GLY590 ALA591 ARG592 VAL593 VAL594 LEU595 VAL596 ALA597 VAL598 ASP599 LYS600 GLY601 VAL602 PHE603 VAL604 LEU605 ASN606 LYS607 LYS608 ASN609 LYS610 LEU611 THR612 GLN613 SER614 LYS615 ILE616 TRP617 ASP618 VAL619 VAL620 GLU621 LYS622 ALA623 ASP624 ILE625 GLY626 CYS627 THR628 PRO629 GLY630 SER631 GLY632 LYS633 ASP634 TYR635 ALA636 GLY637 VAL638 PHE639 SER640 ASP641 ALA642 GLY643 LEU644 THR645 PHE646 THR647 SER648 SER649 SER650 GLY651 GLN652 GLN653 THR654 ALA655 GLN656 ARG657 ALA658 GLU659 LEU660 GLN661 CYS662 PRO663 GLN664 PRO665 |
Unit 2 | GLU753 ASP754 ILE755 ILE756 ALA757 GLU758 GLU759 ASN760 ILE761 VAL762 SER763 ARG764 SER765 GLU766 PHE767 PRO768 GLU769 SER770 TRP771 LEU772 TRP773 ASN774 VAL775 GLU776 ASP777 LEU778 LYS779 GLU780 PRO781 PRO782 LYS783 ASN784 GLY785 ILE786 SER787 THR788 LYS789 LEU790 MET791 ASN792 ILE793 PHE794 LEU795 LYS796 ASP797 SER798 ILE799 THR800 THR801 TRP802 GLU803 ILE804 LEU805 ALA806 VAL807 SER808 MET809 SER810 ASP811 LYS812 LYS813 GLY814 ILE815 CYS816 VAL817 ALA818 ASP819 PRO820 PHE821 GLU822 VAL823 THR824 VAL825 MET826 GLN827 ASP828 PHE829 PHE830 ILE831 ASP832 LEU833 ARG834 LEU835 PRO836 TYR837 SER838 VAL839 VAL840 ARG841 ASN842 GLU843 GLN844 VAL845 GLU846 ILE847 ARG848 ALA849 VAL850 LEU851 TYR852 ASN853 TYR854 ARG855 GLN856 ASN857 GLN858 GLU859 LEU860 LYS861 VAL862 ARG863 VAL864 GLU865 LEU866 LEU867 HIS868 ASN869 PRO870 ALA871 PHE872 CYS873 SER874 LEU875 ALA876 THR877 THR878 LYS879 ARG880 ARG881 HIS882 GLN883 GLN884 THR885 VAL886 THR887 ILE888 PRO889 PRO890 LYS891 SER892 SER893 LEU894 SER895 VAL896 PRO897 TYR898 VAL899 ILE900 VAL901 PRO902 LEU903 LYS904 THR905 GLY906 LEU907 GLN908 GLU909 VAL910 GLU911 VAL912 LYS913 ALA914 ALA915 VAL916 TYR917 HIS918 HIS919 PHE920 ILE921 SER922 ASP923 GLY924 VAL925 ARG926 LYS927 SER928 LEU929 LYS930 VAL931 VAL932 PRO933 GLU934 GLY935 ILE936 ARG937 MET938 ASN939 LYS940 THR941 VAL942 ALA943 VAL944 ARG945 THR946 LEU947 ASP948 PRO949 GLU950 ARG951 LEU952 GLY953 ARG954 GLU955 GLY956 VAL957 GLN958 LYS959 GLU960 ASP961 ILE962 PRO963 PRO964 ALA965 ASP966 LEU967 SER968 ASP969 GLN970 VAL971 PRO972 ASP973 THR974 GLU975 SER976 GLU977 THR978 ARG979 ILE980 LEU981 LEU982 GLN983 GLY984 THR985 PRO986 VAL987 ALA988 GLN989 MET990 THR991 GLU992 ASP993 ALA994 VAL995 ASP996 ALA997 GLU998 ARG999 LEU1000 LYS1001 HIS1002 LEU1003 ILE1004 VAL1005 THR1006 PRO1007 SER1008 GLY1009 CYS1010 GLY1011 GLU1012 GLU1013 ASN1014 MET1015 ILE1016 GLY1017 MET1018 THR1019 PRO1020 THR1021 VAL1022 ILE1023 ALA1024 VAL1025 HIS1026 TYR1027 LEU1028 ASP1029 GLU1030 THR1031 GLU1032 GLN1033 TRP1034 GLU1035 LYS1036 PHE1037 GLY1038 LEU1039 GLU1040 LYS1041 ARG1042 GLN1043 GLY1044 ALA1045 LEU1046 GLU1047 LEU1048 ILE1049 LYS1050 LYS1051 GLY1052 TYR1053 THR1054 GLN1055 GLN1056 LEU1057 ALA1058 PHE1059 ARG1060 GLN1061 PRO1062 SER1063 SER1064 ALA1065 PHE1066 ALA1067 ALA1068 PHE1069 VAL1070 LYS1071 ARG1072 ALA1073 PRO1074 SER1075 THR1076 TRP1077 LEU1078 THR1079 ALA1080 TYR1081 VAL1082 VAL1083 LYS1084 VAL1085 PHE1086 SER1087 LEU1088 ALA1089 VAL1090 ASN1091 LEU1092 ILE1093 ALA1094 ILE1095 ASP1096 SER1097 GLN1098 VAL1099 LEU1100 CYS1101 GLY1102 ALA1103 VAL1104 LYS1105 TRP1106 LEU1107 ILE1108 LEU1109 GLU1110 LYS1111 GLN1112 LYS1113 PRO1114 ASP1115 GLY1116 VAL1117 PHE1118 GLN1119 GLU1120 ASP1121 ALA1122 PRO1123 VAL1124 ILE1125 HIS1126 GLN1127 GLU1128 MET1129 ILE1130 GLY1131 GLY1132 LEU1133 ARG1134 ASN1135 ASN1136 ASN1137 GLU1138 LYS1139 ASP1140 MET1141 ALA1142 LEU1143 THR1144 ALA1145 PHE1146 VAL1147 LEU1148 ILE1149 SER1150 LEU1151 GLN1152 GLU1153 ALA1154 LYS1155 ASP1156 ILE1157 CYS1158 GLU1159 GLU1160 GLN1161 VAL1162 ASN1163 SER1164 LEU1165 PRO1166 GLY1167 SER1168 ILE1169 THR1170 LYS1171 ALA1172 GLY1173 ASP1174 PHE1175 LEU1176 GLU1177 ALA1178 ASN1179 TYR1180 MET1181 ASN1182 LEU1183 GLN1184 ARG1185 SER1186 TYR1187 THR1188 VAL1189 ALA1190 ILE1191 ALA1192 GLY1193 TYR1194 ALA1195 LEU1196 ALA1197 GLN1198 MET1199 GLY1200 ARG1201 LEU1202 LYS1203 GLY1204 PRO1205 LEU1206 LEU1207 ASN1208 LYS1209 PHE1210 LEU1211 THR1212 THR1213 ALA1214 LYS1215 ASP1216 LYS1217 ASN1218 ARG1219 TRP1220 GLU1221 ASP1222 PRO1223 GLY1224 LYS1225 GLN1226 LEU1227 TYR1228 ASN1229 VAL1230 GLU1231 ALA1232 THR1233 SER1234 TYR1235 ALA1236 LEU1237 LEU1238 ALA1239 LEU1240 LEU1241 GLN1242 LEU1243 LYS1244 ASP1245 PHE1246 ASP1247 PHE1248 VAL1249 PRO1250 PRO1251 VAL1252 VAL1253 ARG1254 TRP1255 LEU1256 ASN1257 GLU1258 GLN1259 ARG1260 TYR1261 TYR1262 GLY1263 GLY1264 GLY1265 TYR1266 GLY1267 SER1268 THR1269 GLN1270 ALA1271 THR1272 PHE1273 MET1274 VAL1275 PHE1276 GLN1277 ALA1278 LEU1279 ALA1280 GLN1281 TYR1282 GLN1283 LYS1284 ASP1285 ALA1286 PRO1287 ASP1288 HIS1289 GLN1290 GLU1291 LEU1292 ASN1293 LEU1294 ASP1295 VAL1296 SER1297 LEU1298 GLN1299 LEU1300 PRO1301 SER1302 ARG1303 SER1304 SER1305 LYS1306 ILE1307 THR1308 HIS1309 ARG1310 ILE1311 HIS1312 TRP1313 GLU1314 SER1315 ALA1316 SER1317 LEU1318 LEU1319 ARG1320 SER1321 GLU1322 GLU1323 THR1324 LYS1325 GLU1326 ASN1327 GLU1328 GLY1329 PHE1330 THR1331 VAL1332 THR1333 ALA1334 GLU1335 GLY1336 LYS1337 GLY1338 GLN1339 GLY1340 THR1341 LEU1342 SER1343 VAL1344 VAL1345 THR1346 MET1347 TYR1348 HIS1349 ALA1350 LYS1351 ALA1352 LYS1353 ASP1354 GLN1355 LEU1356 THR1357 CYS1358 ASN1359 LYS1360 PHE1361 ASP1362 LEU1363 LYS1364 VAL1365 THR1366 ILE1367 LYS1368 PRO1369 ALA1370 PRO1371 LYS1381 ASN1382 THR1383 MET1384 ILE1385 LEU1386 GLU1387 ILE1388 CYS1389 THR1390 ARG1391 TYR1392 ARG1393 GLY1394 ASP1395 GLN1396 ASP1397 ALA1398 THR1399 MET1400 SER1401 ILE1402 LEU1403 ASP1404 ILE1405 SER1406 MET1407 MET1408 THR1409 GLY1410 PHE1411 ALA1412 PRO1413 ASP1414 THR1415 ASP1416 ASP1417 LEU1418 LYS1419 GLN1420 LEU1421 ALA1422 ASN1423 GLY1424 VAL1425 ASP1426 ARG1427 TYR1428 ILE1429 SER1430 LYS1431 TYR1432 GLU1433 LEU1434 ASP1435 LYS1436 ALA1437 PHE1438 SER1439 ASP1440 ARG1441 ASN1442 THR1443 LEU1444 ILE1445 ILE1446 TYR1447 LEU1448 ASP1449 LYS1450 VAL1451 SER1452 HIS1453 SER1454 GLU1455 ASP1456 ASP1457 CYS1458 LEU1459 ALA1460 PHE1461 LYS1462 VAL1463 HIS1464 GLN1465 TYR1466 PHE1467 ASN1468 VAL1469 GLU1470 LEU1471 ILE1472 GLN1473 PRO1474 GLY1475 ALA1476 VAL1477 LYS1478 VAL1479 TYR1480 ALA1481 TYR1482 TYR1483 ASN1484 LEU1485 GLU1486 GLU1487 SER1488 CYS1489 THR1490 ARG1491 PHE1492 TYR1493 HIS1494 PRO1495 GLU1496 LYS1497 CYS1506 ARG1507 ASP1508 GLU1509 LEU1510 CYS1511 ARG1512 CYS1513 ALA1514 GLU1515 GLU1516 ASN1517 CYS1518 PHE1519 ILE1520 GLN1521 LYS1522 SER1523 ASP1524 ASP1525 LYS1526 VAL1527 THR1528 LEU1529 GLU1530 GLU1531 ARG1532 LEU1533 ASP1534 LYS1535 ALA1536 CYS1537 GLU1538 PRO1539 GLY1540 VAL1541 ASP1542 TYR1543 VAL1544 TYR1545 LYS1546 THR1547 ARG1548 LEU1549 VAL1550 LYS1551 VAL1552 GLN1553 LEU1554 SER1555 ASN1556 ASP1557 PHE1558 ASP1559 GLU1560 TYR1561 ILE1562 MET1563 ALA1564 ILE1565 GLU1566 GLN1567 THR1568 ILE1569 LYS1570 SER1571 GLY1572 SER1573 ASP1574 GLU1575 VAL1576 GLN1577 VAL1578 GLY1579 GLN1580 GLN1581 ARG1582 THR1583 PHE1584 ILE1585 SER1586 PRO1587 ILE1588 LYS1589 CYS1590 ARG1591 GLU1592 ALA1593 LEU1594 LYS1595 LEU1596 GLU1597 GLU1598 LYS1599 LYS1600 HIS1601 TYR1602 LEU1603 MET1604 TRP1605 GLY1606 LEU1607 SER1608 SER1609 ASP1610 PHE1611 TRP1612 GLY1613 GLU1614 LYS1615 PRO1616 ASN1617 LEU1618 SER1619 TYR1620 ILE1621 ILE1622 GLY1623 LYS1624 ASP1625 THR1626 TRP1627 VAL1628 GLU1629 HIS1630 TRP1631 PRO1632 GLU1633 GLU1634 ASP1635 GLU1636 CYS1637 GLN1638 ASP1639 GLU1640 GLU1641 ASN1642 GLN1643 LYS1644 GLN1645 CYS1646 GLN1647 ASP1648 LEU1649 GLY1650 ALA1651 PHE1652 THR1653 GLU1654 SER1655 MET1656 VAL1657 VAL1658 PHE1659 GLY1660 CYS1661 PRO1662 ASN1663 |
Unit 3 | GLU158 LYS159 VAL160 LEU161 CYS162 THR163 PRO164 PRO165 PRO166 LYS167 ILE168 LYS169 ASN170 GLY171 LYS172 HIS173 THR174 PHE175 SER176 GLU177 VAL178 GLU179 VAL180 PHE181 GLU182 TYR183 LEU184 ASP185 ALA186 VAL187 THR188 TYR189 SER190 CYS191 ASP192 PRO193 ALA194 PRO195 GLY196 PRO197 ASP198 PRO199 PHE200 SER201 LEU202 ILE203 GLY204 GLU205 SER206 THR207 ILE208 TYR209 CYS210 GLY211 ASP212 ASN213 SER214 VAL215 TRP216 SER217 ARG218 ALA219 ALA220 PRO221 GLU222 CYS223 LYS224 VAL225 VAL226 LYS227 CYS228 ARG229 PHE230 PRO231 VAL232 VAL233 GLU234 ASN235 GLY236 LYS237 GLN238 ILE239 SER240 GLY241 PHE242 GLY243 LYS244 LYS245 PHE246 TYR247 TYR248 LYS249 ALA250 THR251 VAL252 MET253 PHE254 GLU255 CYS256 ASP257 LYS258 GLY259 PHE260 TYR261 LEU262 ASP263 GLY264 SER265 ASP266 THR267 ILE268 VAL269 CYS270 ASP271 SER272 ASN273 SER274 THR275 TRP276 ASP277 PRO278 PRO279 VAL280 PRO281 LYS282 CYS283 LEU284 LYS285 VAL286 |
Unit 4 | NAG1 NAG2 |
Unit 5 | NAG1 NAG2 BMA3 |
Unit 6 | EDO1666 EDO1667 EDO1668 EDO1669 |
Unit 7 | EDO2664 EDO2665 EDO2666 EDO2667 EDO2668 EDO2669 EDO2670 EDO2671 EDO2672 EDO2673 EDO2674 EDO2675 EDO2676 EDO2677 EDO2678 EDO2679 EDO2680 EDO2681 EDO2682 EDO2683 EDO2684 EDO2685 EDO2686 EDO2687 EDO2688 EDO2689 EDO2690 EDO2691 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |