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Sequence, Chains, Asymmetric and Biological Units

Title CRYO-EM RECONSTRUCTION OF CASPASE-1 CARD
Keywords HYDROLASE, CARD, INFLAMMASOME, FILAMENT, SIGNALOSOME, HELICA RECONSTRUCTION, DEATH DOMAIN
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FNA     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CASPASE-1  A 85 666 0
2  Protein   CASPASE-1  B 85 666 0
3  Protein   CASPASE-1  C 85 666 0
4  Protein   CASPASE-1  D 85 666 0
5  Protein   CASPASE-1  E 85 666 0
6  Protein   CASPASE-1  F 85 666 0
7  Protein   CASPASE-1  G 85 666 0
8  Protein   CASPASE-1  H 85 666 0
total       680 5328 0

Proteins
Unit 1 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 2 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 3 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 4 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 5 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 6 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 7 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85
Unit 8 ALA1 ASP2 LYS3 VAL4 LEU5 LYS6 GLU7 LYS8 ARG9 LYS10 LEU11 PHE12 ILE13 ARG14 SER15 MET16 GLY17 GLU18 GLY19 THR20 ILE21 ASN22 GLY23 LEU24 LEU25 ASP26 GLU27 LEU28 LEU29 GLN30 THR31 ARG32 VAL33 LEU34 ASN35 LYS36 GLU37 GLU38 MET39 GLU40 LYS41 VAL42 LYS43 ARG44 GLU45 ASN46 ALA47 THR48 VAL49 MET50 ASP51 LYS52 THR53 ARG54 ALA55 LEU56 ILE57 ASP58 SER59 VAL60 ILE61 PRO62 LYS63 GLY64 ALA65 GLN66 ALA67 CYS68 GLN69 ILE70 CYS71 ILE72 THR73 TYR74 ILE75 CYS76 GLU77 GLU78 ASP79 SER80 TYR81 LEU82 ALA83 GLY84 THR85

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany