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Sequence, Chains, Asymmetric and Biological Units

Title SAM-I RIBOSWITCH BEARING THE H. MARISMORTUI KT-7 VARIANT 3BN
Keywords RNA, KINK TURN, RNA MOTIF, SAM-I RIBOSWITCH
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FKG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 94 2031 0
2  Ligand   SAM-I RIBOSWITCH  A 20 0 46
total       114 2031 46

Nucleic acids
Unit 1 G1 G2 C3 U4 U5 A6 U7 C8 A9 A10 G11 A12 G13 A14 G15 G16 G17 G18 G19 A20 G21 U22 G23 A24 C25 U26 G27 G28 C29 G30 C31 G32 A33 A34 G35 A36 C37 C38 C39 C40 C41 G42 G43 C44 A45 A46 C47 C48 A49 G50 A51 A52 A53 U54 G55 G56 U57 G58 C59 C60 A61 A62 U63 U64 C65 C66 U67 G68 C69 A70 G71 C72 G73 G74 A75 A76 A77 C78 G79 U80 U81 G82 A83 A84 A85 G86 A87 U88 G89 A90 G91 C92 C93 G94

Ligands
Unit 2 SAM1095 BA1096 BA1097 BA1098 BA1099 BA1100 BA1101 BA1102 BA1103 BA1104 BA1105 BA1106 BA1107 NA1108 NA1109 NA1110 NA1111 K1112 BA1212 K1232

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany