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Sequence, Chains, Asymmetric and Biological Units

Title CYCLOPHILIN A STABILIZE HIV-1 CAPSID THROUGH A NOVEL NON- CA BINDING SITE
Keywords ISOMERASE
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FJB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GAG POLYPROTEIN  A 218 1703 0
2  Protein   GAG POLYPROTEIN  B 218 1703 0
3  Protein   PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A  C 164 1258 0
total       600 4664 0

Proteins
Unit 1 PRO1 ILE2 VAL3 GLN4 ASN5 ILE6 GLN7 GLY8 GLN9 MET10 VAL11 HIS12 GLN13 ALA14 ILE15 SER16 PRO17 ARG18 THR19 LEU20 ASN21 ALA22 TRP23 VAL24 LYS25 VAL26 VAL27 GLU28 GLU29 LYS30 ALA31 PHE32 SER33 PRO34 GLU35 VAL36 ILE37 PRO38 MET39 PHE40 SER41 ALA42 LEU43 SER44 GLU45 GLY46 ALA47 THR48 PRO49 GLN50 ASP51 LEU52 ASN53 THR54 MET55 LEU56 ASN57 THR58 VAL59 GLY60 GLY61 HIS62 GLN63 ALA64 ALA65 MET66 GLN67 MET68 LEU69 LYS70 GLU71 THR72 ILE73 ASN74 GLU75 GLU76 ALA77 ALA78 GLU79 TRP80 ASP81 ARG82 VAL83 HIS84 PRO85 VAL86 HIS87 ALA88 GLY89 PRO90 ILE91 ALA92 PRO93 GLY94 GLN95 MET96 ARG97 GLU98 PRO99 ARG100 GLY101 SER102 ASP103 ILE104 ALA105 GLY106 THR107 THR108 SER109 THR110 LEU111 GLN112 GLU113 GLN114 ILE115 GLY116 TRP117 MET118 THR119 ASN120 ASN121 PRO122 PRO123 ILE124 PRO125 VAL126 GLY127 GLU128 ILE129 TYR130 LYS131 ARG132 TRP133 ILE134 ILE135 LEU136 GLY137 LEU138 ASN139 LYS140 ILE141 VAL142 ARG143 MET144 TYR145 SER146 PRO147 THR148 SER149 ILE150 LEU151 ASP152 ILE153 ARG154 GLN155 GLY156 PRO157 LYS158 GLU159 PRO160 PHE161 ARG162 ASP163 TYR164 VAL165 ASP166 ARG167 PHE168 TYR169 LYS170 THR171 LEU172 ARG173 ALA174 GLU175 GLN176 ALA177 SER178 GLN179 GLU180 VAL181 LYS182 ASN183 TRP184 MET185 THR186 GLU187 THR188 LEU189 LEU190 VAL191 GLN192 ASN193 ALA194 ASN195 PRO196 ASP197 CYS198 LYS199 THR200 ILE201 LEU202 LYS203 ALA204 LEU205 GLY206 PRO207 ALA208 ALA209 THR210 LEU211 GLU212 GLU213 MET214 MET215 THR216 ALA217 CYS218
Unit 2 PRO1 ILE2 VAL3 GLN4 ASN5 ILE6 GLN7 GLY8 GLN9 MET10 VAL11 HIS12 GLN13 ALA14 ILE15 SER16 PRO17 ARG18 THR19 LEU20 ASN21 ALA22 TRP23 VAL24 LYS25 VAL26 VAL27 GLU28 GLU29 LYS30 ALA31 PHE32 SER33 PRO34 GLU35 VAL36 ILE37 PRO38 MET39 PHE40 SER41 ALA42 LEU43 SER44 GLU45 GLY46 ALA47 THR48 PRO49 GLN50 ASP51 LEU52 ASN53 THR54 MET55 LEU56 ASN57 THR58 VAL59 GLY60 GLY61 HIS62 GLN63 ALA64 ALA65 MET66 GLN67 MET68 LEU69 LYS70 GLU71 THR72 ILE73 ASN74 GLU75 GLU76 ALA77 ALA78 GLU79 TRP80 ASP81 ARG82 VAL83 HIS84 PRO85 VAL86 HIS87 ALA88 GLY89 PRO90 ILE91 ALA92 PRO93 GLY94 GLN95 MET96 ARG97 GLU98 PRO99 ARG100 GLY101 SER102 ASP103 ILE104 ALA105 GLY106 THR107 THR108 SER109 THR110 LEU111 GLN112 GLU113 GLN114 ILE115 GLY116 TRP117 MET118 THR119 ASN120 ASN121 PRO122 PRO123 ILE124 PRO125 VAL126 GLY127 GLU128 ILE129 TYR130 LYS131 ARG132 TRP133 ILE134 ILE135 LEU136 GLY137 LEU138 ASN139 LYS140 ILE141 VAL142 ARG143 MET144 TYR145 SER146 PRO147 THR148 SER149 ILE150 LEU151 ASP152 ILE153 ARG154 GLN155 GLY156 PRO157 LYS158 GLU159 PRO160 PHE161 ARG162 ASP163 TYR164 VAL165 ASP166 ARG167 PHE168 TYR169 LYS170 THR171 LEU172 ARG173 ALA174 GLU175 GLN176 ALA177 SER178 GLN179 GLU180 VAL181 LYS182 ASN183 TRP184 MET185 THR186 GLU187 THR188 LEU189 LEU190 VAL191 GLN192 ASN193 ALA194 ASN195 PRO196 ASP197 CYS198 LYS199 THR200 ILE201 LEU202 LYS203 ALA204 LEU205 GLY206 PRO207 ALA208 ALA209 THR210 LEU211 GLU212 GLU213 MET214 MET215 THR216 ALA217 CYS218
Unit 3 VAL1 ASN2 PRO3 THR4 VAL5 PHE6 PHE7 ASP8 ILE9 ALA10 VAL11 ASP12 GLY13 GLU14 PRO15 LEU16 GLY17 ARG18 VAL19 SER20 PHE21 GLU22 LEU23 PHE24 ALA25 ASP26 LYS27 VAL28 PRO29 LYS30 THR31 ALA32 GLU33 ASN34 PHE35 ARG36 ALA37 LEU38 SER39 THR40 GLY41 GLU42 LYS43 GLY44 PHE45 GLY46 TYR47 LYS48 GLY49 SER50 CYS51 PHE52 HIS53 ARG54 ILE55 ILE56 PRO57 GLY58 PHE59 MET60 CYS61 GLN62 GLY63 GLY64 ASP65 PHE66 THR67 ARG68 HIS69 ASN70 GLY71 THR72 GLY73 GLY74 LYS75 SER76 ILE77 TYR78 GLY79 GLU80 LYS81 PHE82 GLU83 ASP84 GLU85 ASN86 PHE87 ILE88 LEU89 LYS90 HIS91 THR92 GLY93 PRO94 GLY95 ILE96 LEU97 SER98 MET99 ALA100 ASN101 ALA102 GLY103 PRO104 ASN105 THR106 ASN107 GLY108 SER109 GLN110 PHE111 PHE112 ILE113 CYS114 THR115 ALA116 LYS117 THR118 GLU119 TRP120 LEU121 ASP122 GLY123 LYS124 HIS125 VAL126 VAL127 PHE128 GLY129 LYS130 VAL131 LYS132 GLU133 GLY134 MET135 ASN136 ILE137 VAL138 GLU139 ALA140 MET141 GLU142 ARG143 PHE144 GLY145 SER146 ARG147 ASN148 GLY149 LYS150 THR151 SER152 LYS153 LYS154 ILE155 THR156 ILE157 ALA158 ASP159 CYS160 GLY161 GLN162 LEU163 GLU164

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany