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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE STANDARD KINK TURN HMKT-7 AS SIMPLE DUPLEX SPACE GROUP
Keywords RNA, KINK TURN, RNA MOTIF
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FJ0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 19 414 0
2  RNA    B 19 414 0
3  RNA    C 19 414 0
4  Ligand   HMKT-7  B 2 0 2
5  Ligand   HMKT-7  C 1 0 1
total       60 1242 3

Nucleic acids
Unit 1 G1 G2 C3 G4 A5 A6 G7 A8 A9 C10 C11 G12 G13 G14 G15 A16 G17 C18 C19
Unit 2 G1 G2 C3 G4 A5 A6 G7 A8 A9 C10 C11 G12 G13 G14 G15 A16 G17 C18 C19
Unit 3 G1 G2 C3 G4 A5 A6 G7 A8 A9 C10 C11 G12 G13 G14 G15 A16 G17 C18 C19

Ligands
Unit 4 MG1020 MG1021
Unit 5 MG1020

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany