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Sequence, Chains, Asymmetric and Biological Units

Title THREE DIMENSIONAL STRUCTURE OF BROADLY NEUTRALIZING HUMAN AN HEPATITIS C VIRUS (HCV) GLYCOPROTEIN E2 FAB FRAGMENT HC33.8
Keywords FAB FRAGMENT, NEUTRALIZING ANTIBODY, HEPATITIS C VIRUS E2, V PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5FGC     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GENOME POLYPROTEIN  A 9 73 0
2  Protein   ANTI-HCV E2 FAB HC33.8 LIGHT CHAIN  B 214 1633 0
3  Protein   ANTI-HCV E2 FAB HC33.8 HEAVY CHAIN  E 225 1695 0
4 Water     116 0 116
total       564 3401 116

Proteins
Unit 1 ASN415 THR416 ASN417 GLY418 SER419 TRP420 HIS421 ILE422 ASN423
Unit 2 SER1 TYR2 GLU3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 VAL12 SER13 PRO14 GLY15 GLN16 ALA17 ALA18 THR19 ILE20 THR21 CYS22 SER23 GLY24 ASP25 LYS26 LEU27 GLY28 ASP29 LYS30 TYR31 VAL32 SER33 TRP34 TYR35 GLN36 GLN37 ARG38 PRO39 GLY40 GLN41 SER42 PRO43 LEU44 LEU45 VAL46 VAL47 TYR48 GLN49 ASP50 ASN51 LYS52 ARG53 PRO54 SER55 GLY56 ILE57 PRO58 GLU59 ARG60 ILE61 SER62 GLY63 SER64 ASN65 SER66 GLY67 ASN68 THR69 ALA70 THR71 LEU72 THR73 ILE74 ARG75 GLY76 THR77 ARG78 ALA79 MET80 ASP81 GLU82 ALA83 ASP84 TYR85 TYR86 CYS87 GLN88 ALA89 TRP90 ASP91 SER92 SER93 THR94 ASP95 VAL96 VAL97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 THR105 VAL106 LEU107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211 GLY212 GLU213 CYS214
Unit 3 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 ALA12 GLN13 PRO14 GLY15 GLU16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 ASN28 PHE29 TYR30 THR31 TYR32 ALA33 MET34 THR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 ALA50 SER51 SER52 SER53 THR54 ASP55 GLY56 THR57 THR58 TYR59 TYR60 ALA61 ASP62 SER63 VAL64 LYS65 GLY66 ARG67 PHE68 THR69 ILE70 SER71 ARG72 ASP73 ASN74 SER75 LYS76 ASN77 ILE78 LEU79 TYR80 LEU81 GLN82 MET83 ASN84 SER85 LEU86 LYS87 ALA88 GLU89 ASP90 THR91 ALA92 THR93 TYR94 TYR95 CYS96 ALA97 ARG98 ALA99 VAL100 VAL101 PHE102 THR103 ASP104 SER105 SER106 ALA107 TYR108 TYR109 TYR110 SER111 LYS112 TYR113 PHE114 ASP115 TYR116 TRP117 SER118 GLN119 GLY120 THR121 LEU122 VAL123 THR124 VAL125 SER126 SER127 ALA128 SER129 THR130 LYS131 GLY132 PRO133 SER134 VAL135 PHE136 PRO137 LEU138 ALA139 PRO140 SER141 GLY147 GLY148 THR149 ALA150 ALA151 LEU152 GLY153 CYS154 LEU155 VAL156 LYS157 ASP158 TYR159 PHE160 PRO161 GLU162 PRO163 VAL164 THR165 VAL166 SER167 TRP168 ASN169 SER170 GLY171 ALA172 LEU173 THR174 SER175 GLY176 VAL177 HIS178 THR179 PHE180 PRO181 ALA182 VAL183 LEU184 GLN185 SER186 SER187 GLY188 LEU189 TYR190 SER191 LEU192 SER193 SER194 VAL195 VAL196 THR197 VAL198 PRO199 SER200 SER201 SER202 LEU203 GLY204 THR205 GLN206 THR207 TYR208 ILE209 CYS210 ASN211 VAL212 ASN213 HIS214 LYS215 PRO216 SER217 ASN218 THR219 LYS220 VAL221 ASP222 LYS223 LYS224 ALA225 GLU226 PRO227 LYS228 SER229 CYS230

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany