5F72 - Sequence, Chains, Asymmetric and Biological Units

• Title: DE NOVO DESIGN AND CRYSTALLOGRAPHIC VALIDATION OF ANTIBODIES A PRE-SELECTED EPITOPE
• Keywords: DE NOVO PROTEIN, DE NOVO DESIGN, ANTIBODY COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5F72	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	KELCH-LIKE ECH-ASSOCIATED PROTEIN 1	K	285	2190	0
2	Protein	KELCH-LIKE ECH-ASSOCIATED PROTEIN 1	C	285	2190	0
3	Protein	SINGLE CHAIN FV FROM A FAB	T	229	1707	0
4	Protein	SINGLE CHAIN FV FROM A FAB	S	226	1682	0
5	Water			564	0	564
total				1589	7769	564

Proteins

Unit 1	GLY 325 ARG 326 LEU 327 ILE 328 TYR 329 THR 330 ALA 331 GLY 332 GLY 333 TYR 334 PHE 335 ARG 336 GLN 337 SER 338 LEU 339 SER 340 TYR 341 LEU 342 GLU 343 ALA 344 TYR 345 ASN 346 PRO 347 SER 348 ASP 349 GLY 350 THR 351 TRP 352 LEU 353 ASP 354 LEU 355 ALA 356 ASP 357 LEU 358 GLN 359 VAL 360 PRO 361 ARG 362 SER 363 GLY 364 LEU 365 ALA 366 GLY 367 CYS 368 VAL 369 VAL 370 GLY 371 GLY 372 LEU 373 LEU 374 TYR 375 ALA 376 VAL 377 GLY 378 GLY 379 ARG 380 ASN 381 ASN 382 SER 383 PRO 384 ASP 385 GLY 386 ASN 387 THR 388 ASP 389 SER 390 SER 391 ALA 392 LEU 393 ASP 394 CYS 395 TYR 396 ASN 397 PRO 398 MET 399 THR 400 ASN 401 GLN 402 TRP 403 SER 404 PRO 405 CYS 406 ALA 407 PRO 408 MET 409 SER 410 VAL 411 PRO 412 ARG 413 ASN 414 ARG 415 ILE 416 GLY 417 VAL 418 GLY 419 VAL 420 ILE 421 ASP 422 GLY 423 HIS 424 ILE 425 TYR 426 ALA 427 VAL 428 GLY 429 GLY 430 SER 431 HIS 432 GLY 433 CYS 434 ILE 435 HIS 436 HIS 437 ASN 438 SER 439 VAL 440 GLU 441 ARG 442 TYR 443 GLU 444 PRO 445 GLU 446 ARG 447 ASP 448 GLU 449 TRP 450 HIS 451 LEU 452 VAL 453 ALA 454 PRO 455 MET 456 LEU 457 THR 458 ARG 459 ARG 460 ILE 461 GLY 462 VAL 463 GLY 464 VAL 465 ALA 466 VAL 467 LEU 468 ASN 469 ARG 470 LEU 471 LEU 472 TYR 473 ALA 474 VAL 475 GLY 476 GLY 477 PHE 478 ASP 479 GLY 480 THR 481 ASN 482 ARG 483 LEU 484 ASN 485 SER 486 ALA 487 GLU 488 CYS 489 TYR 490 TYR 491 PRO 492 GLU 493 ARG 494 ASN 495 GLU 496 TRP 497 ARG 498 MET 499 ILE 500 THR 501 ALA 502 MET 503 ASN 504 THR 505 ILE 506 ARG 507 SER 508 GLY 509 ALA 510 GLY 511 VAL 512 CYS 513 VAL 514 LEU 515 HIS 516 ASN 517 CYS 518 ILE 519 TYR 520 ALA 521 ALA 522 GLY 523 GLY 524 TYR 525 ASP 526 GLY 527 GLN 528 ASP 529 GLN 530 LEU 531 ASN 532 SER 533 VAL 534 GLU 535 ARG 536 TYR 537 ASP 538 VAL 539 GLU 540 THR 541 GLU 542 THR 543 TRP 544 THR 545 PHE 546 VAL 547 ALA 548 PRO 549 MET 550 LYS 551 HIS 552 ARG 553 ARG 554 SER 555 ALA 556 LEU 557 GLY 558 ILE 559 THR 560 VAL 561 HIS 562 GLN 563 GLY 564 ARG 565 ILE 566 TYR 567 VAL 568 LEU 569 GLY 570 GLY 571 TYR 572 ASP 573 GLY 574 HIS 575 THR 576 PHE 577 LEU 578 ASP 579 SER 580 VAL 581 GLU 582 CYS 583 TYR 584 ASP 585 PRO 586 ASP 587 THR 588 ASP 589 THR 590 TRP 591 SER 592 GLU 593 VAL 594 THR 595 ARG 596 MET 597 THR 598 SER 599 GLY 600 ARG 601 SER 602 GLY 603 VAL 604 GLY 605 VAL 606 ALA 607 VAL 608 THR 609
Unit 2	GLY 325 ARG 326 LEU 327 ILE 328 TYR 329 THR 330 ALA 331 GLY 332 GLY 333 TYR 334 PHE 335 ARG 336 GLN 337 SER 338 LEU 339 SER 340 TYR 341 LEU 342 GLU 343 ALA 344 TYR 345 ASN 346 PRO 347 SER 348 ASP 349 GLY 350 THR 351 TRP 352 LEU 353 ASP 354 LEU 355 ALA 356 ASP 357 LEU 358 GLN 359 VAL 360 PRO 361 ARG 362 SER 363 GLY 364 LEU 365 ALA 366 GLY 367 CYS 368 VAL 369 VAL 370 GLY 371 GLY 372 LEU 373 LEU 374 TYR 375 ALA 376 VAL 377 GLY 378 GLY 379 ARG 380 ASN 381 ASN 382 SER 383 PRO 384 ASP 385 GLY 386 ASN 387 THR 388 ASP 389 SER 390 SER 391 ALA 392 LEU 393 ASP 394 CYS 395 TYR 396 ASN 397 PRO 398 MET 399 THR 400 ASN 401 GLN 402 TRP 403 SER 404 PRO 405 CYS 406 ALA 407 PRO 408 MET 409 SER 410 VAL 411 PRO 412 ARG 413 ASN 414 ARG 415 ILE 416 GLY 417 VAL 418 GLY 419 VAL 420 ILE 421 ASP 422 GLY 423 HIS 424 ILE 425 TYR 426 ALA 427 VAL 428 GLY 429 GLY 430 SER 431 HIS 432 GLY 433 CYS 434 ILE 435 HIS 436 HIS 437 ASN 438 SER 439 VAL 440 GLU 441 ARG 442 TYR 443 GLU 444 PRO 445 GLU 446 ARG 447 ASP 448 GLU 449 TRP 450 HIS 451 LEU 452 VAL 453 ALA 454 PRO 455 MET 456 LEU 457 THR 458 ARG 459 ARG 460 ILE 461 GLY 462 VAL 463 GLY 464 VAL 465 ALA 466 VAL 467 LEU 468 ASN 469 ARG 470 LEU 471 LEU 472 TYR 473 ALA 474 VAL 475 GLY 476 GLY 477 PHE 478 ASP 479 GLY 480 THR 481 ASN 482 ARG 483 LEU 484 ASN 485 SER 486 ALA 487 GLU 488 CYS 489 TYR 490 TYR 491 PRO 492 GLU 493 ARG 494 ASN 495 GLU 496 TRP 497 ARG 498 MET 499 ILE 500 THR 501 ALA 502 MET 503 ASN 504 THR 505 ILE 506 ARG 507 SER 508 GLY 509 ALA 510 GLY 511 VAL 512 CYS 513 VAL 514 LEU 515 HIS 516 ASN 517 CYS 518 ILE 519 TYR 520 ALA 521 ALA 522 GLY 523 GLY 524 TYR 525 ASP 526 GLY 527 GLN 528 ASP 529 GLN 530 LEU 531 ASN 532 SER 533 VAL 534 GLU 535 ARG 536 TYR 537 ASP 538 VAL 539 GLU 540 THR 541 GLU 542 THR 543 TRP 544 THR 545 PHE 546 VAL 547 ALA 548 PRO 549 MET 550 LYS 551 HIS 552 ARG 553 ARG 554 SER 555 ALA 556 LEU 557 GLY 558 ILE 559 THR 560 VAL 561 HIS 562 GLN 563 GLY 564 ARG 565 ILE 566 TYR 567 VAL 568 LEU 569 GLY 570 GLY 571 TYR 572 ASP 573 GLY 574 HIS 575 THR 576 PHE 577 LEU 578 ASP 579 SER 580 VAL 581 GLU 582 CYS 583 TYR 584 ASP 585 PRO 586 ASP 587 THR 588 ASP 589 THR 590 TRP 591 SER 592 GLU 593 VAL 594 THR 595 ARG 596 MET 597 THR 598 SER 599 GLY 600 ARG 601 SER 602 GLY 603 VAL 604 GLY 605 VAL 606 ALA 607 VAL 608 THR 609
Unit 3	GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 ALA 28 ILE 29 SER 30 ALA 31 SER 32 SER 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 CYS 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 SER 50 ILE 51 ASP 52 PRO 53 GLU 54 THR 55 GLY 56 GLU 57 THR 58 LEU 59 TYR 60 ALA 61 LYS 62 SER 63 VAL 64 ALA 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ALA 72 ASP 73 THR 74 SER 75 LYS 76 ASN 77 THR 78 ALA 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 ALA 99 TYR 100 ALA 101 GLY 102 ASP 103 GLY 104 VAL 105 TYR 106 TYR 107 ALA 108 ASP 109 VAL 110 TRP 111 GLY 112 GLN 113 GLY 114 THR 115 LEU 116 VAL 117 THR 118 VAL 119 SER 120 SER 121 GLY 140 SER 141 ASP 142 ILE 143 GLN 144 MET 145 THR 146 GLN 147 SER 148 PRO 149 SER 150 SER 151 LEU 152 SER 153 ALA 154 SER 155 VAL 156 GLY 157 ASP 158 ARG 159 VAL 160 THR 161 ILE 162 THR 163 CYS 164 ARG 165 ALA 166 SER 167 GLN 168 SER 169 VAL 170 SER 171 SER 172 ALA 173 VAL 174 ALA 175 TRP 176 TYR 177 GLN 178 GLN 179 LYS 180 PRO 181 GLY 182 LYS 183 ALA 184 PRO 185 LYS 186 LEU 187 LEU 188 ILE 189 TYR 190 SER 191 ALA 192 SER 193 SER 194 LEU 195 TYR 196 SER 197 GLY 198 VAL 199 PRO 200 SER 201 ARG 202 PHE 203 SER 204 GLY 205 SER 206 ARG 207 SER 208 GLY 209 THR 210 ASP 211 PHE 212 THR 213 LEU 214 THR 215 ILE 216 SER 217 SER 218 LEU 219 GLN 220 PRO 221 GLU 222 ASP 223 PHE 224 ALA 225 THR 226 TYR 227 TYR 228 CYS 229 GLN 230 GLN 231 SER 232 TYR 233 SER 234 PHE 235 PRO 236 SER 237 THR 238 PHE 239 GLY 240 CYS 241 GLY 242 THR 243 LYS 244 VAL 245 GLU 246 ILE 247 LYS 248 ARG 249
Unit 4	GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 ALA 28 ILE 29 SER 30 ALA 31 SER 32 SER 33 ILE 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 CYS 44 LEU 45 GLU 46 TRP 47 VAL 48 ALA 49 SER 50 ILE 51 ASP 52 PRO 53 GLU 54 THR 55 GLY 56 GLU 57 THR 58 LEU 59 TYR 60 ALA 61 LYS 62 SER 63 VAL 64 ALA 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ALA 72 ASP 73 THR 74 SER 75 LYS 76 ASN 77 THR 78 ALA 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 ALA 99 TYR 100 ALA 101 GLY 102 ASP 103 GLY 104 VAL 105 TYR 106 TYR 107 ALA 108 ASP 109 VAL 110 TRP 111 GLY 112 GLN 113 GLY 114 THR 115 LEU 116 VAL 117 THR 118 VAL 119 SER 120 GLY 140 SER 141 ASP 142 ILE 143 GLN 144 MET 145 THR 146 GLN 147 SER 148 PRO 149 SER 150 SER 151 LEU 152 SER 153 ALA 154 SER 155 VAL 156 GLY 157 ASP 158 ARG 159 VAL 160 THR 161 ILE 162 THR 163 CYS 164 ARG 165 ALA 166 SER 167 GLN 168 SER 169 VAL 170 SER 171 SER 172 ALA 173 VAL 174 ALA 175 TRP 176 TYR 177 GLN 178 GLN 179 LYS 180 PRO 181 GLY 182 LYS 183 ALA 184 PRO 185 LYS 186 LEU 187 LEU 188 ILE 189 TYR 190 SER 191 ALA 192 SER 193 SER 194 LEU 195 TYR 196 SER 197 GLY 198 VAL 199 PRO 200 SER 201 ARG 202 PHE 203 SER 204 GLY 205 SER 206 ARG 207 SER 208 GLY 209 THR 210 ASP 211 PHE 212 THR 213 LEU 214 THR 215 ILE 216 SER 217 SER 218 LEU 219 GLN 220 PRO 221 GLU 222 ASP 223 PHE 224 ALA 225 THR 226 TYR 227 TYR 228 CYS 229 GLN 230 GLN 231 SER 232 TYR 233 SER 234 PHE 235 PRO 236 SER 237 THR 238 PHE 239 GLY 240 CYS 241 GLY 242 THR 243 LYS 244 VAL 245 GLU 246 ILE 247