5F4M - Sequence, Chains, Asymmetric and Biological Units

• Title: PROTRUDING DOMAIN OF GII.17 NOROVIRUS KAWASAKI323
• Keywords: NOROVIRUS, CAPSID PROTEIN, PROTRUDING DOMAIN, VIRAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5F4M	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CAPSID PROTEIN	A	308	2404	0
2	Protein	CAPSID PROTEIN	B	305	2389	0
3	Ligand	CAPSID PROTEIN	A	1	0	4
4	Ligand	CAPSID PROTEIN	B	1	0	4
5	Water			344	0	344
total				959	4793	352

Proteins

Unit 1

GLY 221 PRO 222 GLY 223 SER 224 LYS 225 PRO 226 PHE 227 SER 228 LEU 229 PRO 230 ILE 231 LEU 232 THR 233 LEU 234 SER 235 GLU 236 LEU 237 THR 238 ASN 239 SER 240 ARG 241 PHE 242 PRO 243 VAL 244 PRO 245 ILE 246 ASP 247 SER 248 LEU 249 PHE 250 THR 251 ALA 252 GLN 253 ASN 254 ASN 255 VAL 256 LEU 257 GLN 258 VAL 259 GLN 260 CYS 261 GLN 262 ASN 263 GLY 264 ARG 265 CYS 266 THR 267 LEU 268 ASP 269 GLY 270 GLU 271 LEU 272 GLN 273 GLY 274 THR 275 THR 276 GLN 277 LEU 278 LEU 279 PRO 280 SER 281 GLY 282 ILE 283 CYS 284 ALA 285 PHE 286 ARG 287 GLY 288 ARG 289 VAL 290 THR 291 ALA 292 GLU 293 THR 294 ASP 295 HIS 296 ARG 297 ASP 298 LYS 299 TRP 300 HIS 301 MET 302 GLN 303 LEU 304 GLN 305 ASN 306 LEU 307 ASN 308 GLY 309 THR 310 THR 311 TYR 312 ASP 313 PRO 314 THR 315 ASP 316 ASP 317 VAL 318 PRO 319 ALA 320 PRO 321 LEU 322 GLY 323 THR 324 PRO 325 ASP 326 PHE 327 LYS 328 GLY 329 VAL 330 VAL 331 PHE 332 GLY 333 VAL 334 ALA 335 SER 336 GLN 337 ARG 338 ASN 339 VAL 340 GLY 341 ASN 342 ASP 343 ALA 344 PRO 345 GLY 346 SER 347 THR 348 ARG 349 ALA 350 HIS 351 GLU 352 ALA 353 VAL 354 ILE 355 SER 356 THR 357 TYR 358 SER 359 PRO 360 GLN 361 PHE 362 VAL 363 PRO 364 LYS 365 LEU 366 GLY 367 SER 368 VAL 369 ASN 370 PHE 371 ARG 372 SER 373 ASN 374 ASP 375 ASN 376 ASP 377 PHE 378 GLN 379 LEU 380 GLN 381 PRO 382 THR 383 LYS 384 PHE 385 THR 386 PRO 387 VAL 388 GLY 389 ILE 390 ASN 391 ASP 392 ASP 393 GLY 394 ASP 395 HIS 396 PRO 397 PHE 398 ARG 399 GLN 400 TRP 401 GLU 402 LEU 403 PRO 404 ASP 405 TYR 406 SER 407 GLY 408 LEU 409 LEU 410 THR 411 LEU 412 ASN 413 MET 414 ASN 415 LEU 416 ALA 417 PRO 418 PRO 419 VAL 420 ALA 421 PRO 422 ASN 423 PHE 424 PRO 425 GLY 426 GLU 427 GLN 428 LEU 429 LEU 430 PHE 431 PHE 432 ARG 433 SER 434 PHE 435 VAL 436 PRO 437 CYS 438 SER 439 GLY 440 GLY 441 TYR 442 ASN 443 GLN 444 GLY 445 ILE 446 VAL 447 ASP 448 CYS 449 LEU 450 ILE 451 PRO 452 GLN 453 GLU 454 TRP 455 ILE 456 GLN 457 HIS 458 PHE 459 TYR 460 GLN 461 GLU 462 SER 463 ALA 464 PRO 465 SER 466 GLN 467 SER 468 ASP 469 VAL 470 ALA 471 LEU 472 ILE 473 ARG 474 TYR 475 VAL 476 ASN 477 PRO 478 ASP 479 THR 480 GLY 481 ARG 482 THR 483 LEU 484 PHE 485 GLU 486 ALA 487 LYS 488 LEU 489 HIS 490 ARG 491 SER 492 GLY 493 TYR 494 ILE 495 THR 496 VAL 497 ALA 498 HIS 499 SER 500 GLY 501 ASP 502 TYR 503 PRO 504 LEU 505 VAL 506 VAL 507 PRO 508 ALA 509 ASN 510 GLY 511 TYR 512 PHE 513 ARG 514 PHE 515 ASP 516 SER 517 TRP 518 VAL 519 ASN 520 GLN 521 PHE 522 TYR 523 SER 524 LEU 525 ALA 526 PRO 527 MET 528

Unit 2

SER 224 LYS 225 PRO 226 PHE 227 SER 228 LEU 229 PRO 230 ILE 231 LEU 232 THR 233 LEU 234 SER 235 GLU 236 LEU 237 THR 238 ASN 239 SER 240 ARG 241 PHE 242 PRO 243 VAL 244 PRO 245 ILE 246 ASP 247 SER 248 LEU 249 PHE 250 THR 251 ALA 252 GLN 253 ASN 254 ASN 255 VAL 256 LEU 257 GLN 258 VAL 259 GLN 260 CYS 261 GLN 262 ASN 263 GLY 264 ARG 265 CYS 266 THR 267 LEU 268 ASP 269 GLY 270 GLU 271 LEU 272 GLN 273 GLY 274 THR 275 THR 276 GLN 277 LEU 278 LEU 279 PRO 280 SER 281 GLY 282 ILE 283 CYS 284 ALA 285 PHE 286 ARG 287 GLY 288 ARG 289 VAL 290 THR 291 ALA 292 GLU 293 THR 294 ASP 295 HIS 296 ARG 297 ASP 298 LYS 299 TRP 300 HIS 301 MET 302 GLN 303 LEU 304 GLN 305 ASN 306 LEU 307 ASN 308 GLY 309 THR 310 THR 311 TYR 312 ASP 313 PRO 314 THR 315 ASP 316 ASP 317 VAL 318 PRO 319 ALA 320 PRO 321 LEU 322 GLY 323 THR 324 PRO 325 ASP 326 PHE 327 LYS 328 GLY 329 VAL 330 VAL 331 PHE 332 GLY 333 VAL 334 ALA 335 SER 336 GLN 337 ARG 338 ASN 339 VAL 340 GLY 341 ASN 342 ASP 343 ALA 344 PRO 345 GLY 346 SER 347 THR 348 ARG 349 ALA 350 HIS 351 GLU 352 ALA 353 VAL 354 ILE 355 SER 356 THR 357 TYR 358 SER 359 PRO 360 GLN 361 PHE 362 VAL 363 PRO 364 LYS 365 LEU 366 GLY 367 SER 368 VAL 369 ASN 370 PHE 371 ARG 372 SER 373 ASN 374 ASP 375 ASN 376 ASP 377 PHE 378 GLN 379 LEU 380 GLN 381 PRO 382 THR 383 LYS 384 PHE 385 THR 386 PRO 387 VAL 388 GLY 389 ILE 390 ASN 391 ASP 392 ASP 393 GLY 394 ASP 395 HIS 396 PRO 397 PHE 398 ARG 399 GLN 400 TRP 401 GLU 402 LEU 403 PRO 404 ASP 405 TYR 406 SER 407 GLY 408 LEU 409 LEU 410 THR 411 LEU 412 ASN 413 MET 414 ASN 415 LEU 416 ALA 417 PRO 418 PRO 419 VAL 420 ALA 421 PRO 422 ASN 423 PHE 424 PRO 425 GLY 426 GLU 427 GLN 428 LEU 429 LEU 430 PHE 431 PHE 432 ARG 433 SER 434 PHE 435 VAL 436 PRO 437 CYS 438 SER 439 GLY 440 GLY 441 TYR 442 ASN 443 GLN 444 GLY 445 ILE 446 VAL 447 ASP 448 CYS 449 LEU 450 ILE 451 PRO 452 GLN 453 GLU 454 TRP 455 ILE 456 GLN 457 HIS 458 PHE 459 TYR 460 GLN 461 GLU 462 SER 463 ALA 464 PRO 465 SER 466 GLN 467 SER 468 ASP 469 VAL 470 ALA 471 LEU 472 ILE 473 ARG 474 TYR 475 VAL 476 ASN 477 PRO 478 ASP 479 THR 480 GLY 481 ARG 482 THR 483 LEU 484 PHE 485 GLU 486 ALA 487 LYS 488 LEU 489 HIS 490 ARG 491 SER 492 GLY 493 TYR 494 ILE 495 THR 496 VAL 497 ALA 498 HIS 499 SER 500 GLY 501 ASP 502 TYR 503 PRO 504 LEU 505 VAL 506 VAL 507 PRO 508 ALA 509 ASN 510 GLY 511 TYR 512 PHE 513 ARG 514 PHE 515 ASP 516 SER 517 TRP 518 VAL 519 ASN 520 GLN 521 PHE 522 TYR 523 SER 524 LEU 525 ALA 526 PRO 527 MET 528

Ligands

Unit 3	EDO 601
Unit 4	EDO 601