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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS OF EBOLA VIRUS ENTRY: VIRAL GLYCOPROTEIN BO ENDOSOMAL RECEPTOR NIEMANN-PICK C1
Keywords EBOLA VIRUS, GLYCOPROTEIN, NPC1-C, VIRAL PROTEIN-TRANSPORT P COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5F1B     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GP1  A 158 1194 0
2  Protein   GP2  B 87 687 0
3  Protein   NIEMANN-PICK C1 PROTEIN  C 215 1748 0
4  Ligand    D 2 0 28
5 Water     171 0 171
total       633 3629 199

Proteins
Unit 1 ARG31 SER32 ILE33 PRO34 LEU35 GLY36 VAL37 ILE38 HIS39 ASN40 SER41 VAL42 LEU43 GLN44 VAL45 SER46 ASP47 VAL48 ASP49 LYS50 LEU51 VAL52 CYS53 ARG54 ASP55 LYS56 LEU57 SER58 SER59 THR60 ASN61 GLN62 LEU63 ARG64 SER65 VAL66 GLY67 LEU68 ASN69 LEU70 GLU71 GLY72 ASN73 GLY74 VAL75 ALA76 THR77 ASP78 VAL79 PRO80 SER81 ALA82 THR83 LYS84 ARG85 TRP86 GLY87 PHE88 ARG89 SER90 GLY91 VAL92 PRO93 PRO94 LYS95 VAL96 VAL97 ASN98 TYR99 GLU100 ALA101 GLY102 GLU103 TRP104 ALA105 GLU106 ASN107 CYS108 TYR109 ASN110 LEU111 GLU112 ILE113 LYS114 LYS115 PRO116 ASP117 GLY118 SER119 GLU120 CYS121 LEU122 PRO123 ALA124 ALA125 PRO126 ASP127 GLY128 ILE129 ARG130 GLY131 PHE132 PRO133 ARG134 CYS135 ARG136 TYR137 VAL138 HIS139 LYS140 VAL141 SER142 GLY143 THR144 GLY145 PRO146 CYS147 ALA148 GLY149 ASP150 PHE151 ALA152 PHE153 HIS154 LYS155 GLU156 GLY157 ALA158 PHE159 PHE160 LEU161 TYR162 ASP163 ARG164 LEU165 ALA166 SER167 THR168 VAL169 ILE170 TYR171 ARG172 GLY173 THR174 THR175 PHE176 ALA177 GLU178 GLY179 VAL180 VAL181 ALA182 PHE183 LEU184 ILE185 LEU186 PRO187 GLN188
Unit 2 PRO509 LYS510 CYS511 ASN512 PRO513 ASN514 LEU515 HIS516 TYR517 TRP518 THR519 THR520 GLN521 ALA525 ALA526 ILE527 GLY528 LEU529 ALA530 TRP531 ILE532 PRO533 TYR534 PHE535 GLY536 PRO537 ALA538 ALA539 GLU540 GLY541 ILE542 TYR543 THR544 GLU545 GLY546 LEU547 MET548 HIS549 ASN550 GLN551 ASP552 GLY553 LEU554 ILE555 CYS556 GLY557 LEU558 ARG559 GLN560 LEU561 ALA562 ASN563 GLU564 THR565 THR566 GLN567 ALA568 LEU569 GLN570 LEU571 PHE572 LEU573 ARG574 ALA575 THR576 THR577 GLU578 LEU579 ARG580 THR581 PHE582 SER583 ILE584 LEU585 ASN586 ARG587 LYS588 ALA589 ILE590 ASP591 PHE592 LEU593 LEU594 GLN595 ARG596 TRP597 GLY598
Unit 3 LEU18 GLU19 LYS20 GLU21 TYR22 PHE23 ASP24 GLN25 HIS26 PHE27 GLY28 PRO29 PHE30 PHE31 ARG32 THR33 GLU34 GLN35 LEU36 ILE37 ILE38 ARG39 ALA40 PRO41 LEU42 THR43 ASP44 LYS45 HIS46 ILE47 TYR48 GLN49 PRO50 TYR51 PRO52 SER53 GLY54 ALA55 ASP56 VAL57 PRO58 PHE59 GLY60 PRO61 PRO62 LEU63 ASP64 ILE65 GLN66 ILE67 LEU68 HIS69 GLN70 VAL71 LEU72 ASP73 LEU74 GLN75 ILE76 ALA77 ILE78 GLU79 ASN80 ILE81 THR82 ALA83 SER84 TYR85 ASP86 ASN87 GLU88 THR89 VAL90 THR91 LEU92 GLN93 ASP94 ILE95 CYS96 LEU97 ALA98 PRO99 LEU100 SER101 PRO102 TYR103 ASN104 THR105 ASN106 CYS107 THR108 ILE109 LEU110 SER111 VAL112 LEU113 ASN114 TYR115 PHE116 GLN117 ASN118 SER119 HIS120 SER121 VAL122 LEU123 ASP124 HIS125 LYS126 LYS127 GLY128 ASP129 ASP130 PHE131 PHE132 VAL133 TYR134 ALA135 ASP136 TYR137 HIS138 THR139 HIS140 PHE141 LEU142 TYR143 CYS144 VAL145 ARG146 ALA147 PRO148 ALA149 SER150 LEU151 ASN152 ASP153 THR154 SER155 LEU156 LEU157 HIS158 ASP159 PRO160 CYS161 LEU162 GLY163 THR164 PHE165 GLY166 GLY167 PRO168 VAL169 PHE170 PRO171 TRP172 LEU173 VAL174 LEU175 GLY176 GLY177 TYR178 ASP179 ASP180 GLN181 ASN182 TYR183 ASN184 ASN185 ALA186 THR187 ALA188 LEU189 VAL190 ILE191 THR192 PHE193 PRO194 VAL195 ASN196 ASN197 TYR198 TYR199 ASN200 ASP201 THR202 GLU203 LYS204 LEU205 GLN206 ARG207 ALA208 GLN209 ALA210 TRP211 GLU212 LYS213 GLU214 PHE215 ILE216 ASN217 PHE218 VAL219 LYS220 ASN221 TYR222 LYS223 ASN224 PRO225 ASN226 LEU227 THR228 ILE229 SER230 PHE231 THR232

Ligands
Unit 4 NAG1 NAG2

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany