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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE PEPTIDE CYTO8-RETEV
Keywords APOPTOSIS, CELL DEATH, GLIOBLASTOMA, MULTIPROTEIN COMPLEXES, DOMAINS, PEPTIDES DESIGN, PROTEIN BINDING, NON-RECEPTOR TYP PTPN4, RABIES VIRUS, PDZ BINDING MOTIF
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5EYZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4  A 93 715 0
2  Protein   TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4  B 94 727 0
3  Protein   TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4  C 93 721 0
4  Protein   TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4  D 92 711 0
5  Protein   CYTO8-RETEV  E 6 48 0
6  Protein   CYTO8-RETEV  F 6 48 0
7  Protein   CYTO8-RETEV  G 6 48 0
8  Protein   CYTO8-RETEV  H 6 48 0
9  Ligand   TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4  C 1 0 1
10 Water     109 0 109
total       506 3066 110

Proteins
Unit 1 HIS512 ASP513 ASN514 LEU515 VAL516 LEU517 ILE518 ARG519 MET520 LYS521 PRO522 ASP523 GLU524 ASN525 GLY526 ARG527 PHE528 GLY529 PHE530 ASN531 VAL532 LYS533 GLY534 GLY535 TYR536 ASP537 GLN538 LYS539 MET540 PRO541 VAL542 ILE543 VAL544 SER545 ARG546 VAL547 ALA548 PRO549 GLY550 THR551 PRO552 ALA553 ASP554 LEU555 CYS556 VAL557 PRO558 ARG559 LEU560 ASN561 GLU562 GLY563 ASP564 GLN565 VAL566 VAL567 LEU568 ILE569 ASN570 GLY571 ARG572 ASP573 ILE574 ALA575 GLU576 HIS577 THR578 HIS579 ASP580 GLN581 VAL582 VAL583 LEU584 PHE585 ILE586 LYS587 ALA588 SER589 CYS590 GLU591 ARG592 HIS593 SER594 GLY595 GLU596 LEU597 MET598 LEU599 LEU600 VAL601 ARG602 PRO603 ASN604
Unit 2 PRO511 HIS512 ASP513 ASN514 LEU515 VAL516 LEU517 ILE518 ARG519 MET520 LYS521 PRO522 ASP523 GLU524 ASN525 GLY526 ARG527 PHE528 GLY529 PHE530 ASN531 VAL532 LYS533 GLY534 GLY535 TYR536 ASP537 GLN538 LYS539 MET540 PRO541 VAL542 ILE543 VAL544 SER545 ARG546 VAL547 ALA548 PRO549 GLY550 THR551 PRO552 ALA553 ASP554 LEU555 CYS556 VAL557 PRO558 ARG559 LEU560 ASN561 GLU562 GLY563 ASP564 GLN565 VAL566 VAL567 LEU568 ILE569 ASN570 GLY571 ARG572 ASP573 ILE574 ALA575 GLU576 HIS577 THR578 HIS579 ASP580 GLN581 VAL582 VAL583 LEU584 PHE585 ILE586 LYS587 ALA588 SER589 CYS590 GLU591 ARG592 HIS593 SER594 GLY595 GLU596 LEU597 MET598 LEU599 LEU600 VAL601 ARG602 PRO603 ASN604
Unit 3 HIS512 ASP513 ASN514 LEU515 VAL516 LEU517 ILE518 ARG519 MET520 LYS521 PRO522 ASP523 GLU524 ASN525 GLY526 ARG527 PHE528 GLY529 PHE530 ASN531 VAL532 LYS533 GLY534 GLY535 TYR536 ASP537 GLN538 LYS539 MET540 PRO541 VAL542 ILE543 VAL544 SER545 ARG546 VAL547 ALA548 PRO549 GLY550 THR551 PRO552 ALA553 ASP554 LEU555 CYS556 VAL557 PRO558 ARG559 LEU560 ASN561 GLU562 GLY563 ASP564 GLN565 VAL566 VAL567 LEU568 ILE569 ASN570 GLY571 ARG572 ASP573 ILE574 ALA575 GLU576 HIS577 THR578 HIS579 ASP580 GLN581 VAL582 VAL583 LEU584 PHE585 ILE586 LYS587 ALA588 SER589 CYS590 GLU591 ARG592 HIS593 SER594 GLY595 GLU596 LEU597 MET598 LEU599 LEU600 VAL601 ARG602 PRO603 ASN604
Unit 4 ASP513 ASN514 LEU515 VAL516 LEU517 ILE518 ARG519 MET520 LYS521 PRO522 ASP523 GLU524 ASN525 GLY526 ARG527 PHE528 GLY529 PHE530 ASN531 VAL532 LYS533 GLY534 GLY535 TYR536 ASP537 GLN538 LYS539 MET540 PRO541 VAL542 ILE543 VAL544 SER545 ARG546 VAL547 ALA548 PRO549 GLY550 THR551 PRO552 ALA553 ASP554 LEU555 CYS556 VAL557 PRO558 ARG559 LEU560 ASN561 GLU562 GLY563 ASP564 GLN565 VAL566 VAL567 LEU568 ILE569 ASN570 GLY571 ARG572 ASP573 ILE574 ALA575 GLU576 HIS577 THR578 HIS579 ASP580 GLN581 VAL582 VAL583 LEU584 PHE585 ILE586 LYS587 ALA588 SER589 CYS590 GLU591 ARG592 HIS593 SER594 GLY595 GLU596 LEU597 MET598 LEU599 LEU600 VAL601 ARG602 PRO603 ASN604
Unit 5 GLY8 ARG9 GLU10 THR11 GLU12 VAL13
Unit 6 GLY8 ARG9 GLU10 THR11 GLU12 VAL13
Unit 7 GLY8 ARG9 GLU10 THR11 GLU12 VAL13
Unit 8 GLY8 ARG9 GLU10 THR11 GLU12 VAL13

Ligands
Unit 9 CL701

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany