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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HUMAN FAB VRC38.01, AN HIV-1 V1V2-D NEUTRALIZING ANTIBODY ISOLATED FROM DONOR N90
Keywords FAB, HIV-1, V1V2, ENV, ANTIBODY, ENVELOPE, NEUTRALIZING, IMM SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5EWI     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VRC38.01 HEAVY CHAIN  H 221 3286 0
2  Protein   VRC38.01 LIGHT CHAIN  L 217 3314 0
3 Water     566 0 566
total       1004 6600 566

Proteins
Unit 1 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 LYS10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 GLU23 ALA24 SER25 GLY26 GLU27 SER28 VAL29 GLY30 ASP31 ASN32 ASP33 MET34 HIS35 TRP36 VAL37 ARG38 GLN39 VAL40 ALA41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 SER50 ILE51 GLY52 SER53 SER54 GLY55 ASP56 THR57 TYR58 TYR59 ILE60 ASP61 ALA62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 VAL69 SER70 ARG71 ASP72 LYS73 GLY74 ARG75 ASN76 SER77 VAL78 TYR79 LEU80 GLN81 MET82 LYS82A THR82B LEU82C THR83 VAL84 GLY85 ASP86 THR87 GLY88 VAL89 TYR90 PHE91 CYS92 VAL93 ARG94 GLY95 PRO96 GLU97 SER98 GLY99 TRP100 PHE100A TYR100B HIS100C TYR100D TYR100E TRP100F GLY100G LEU100H GLY101 VAL102 TRP103 GLY104 ARG105 GLY106 THR107 THR108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 SER128 LYS129 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 ARG210 VAL211 GLU212 PRO213 LYS214
Unit 2 ASP1 LEU2 LEU3 MET4 THR5 GLN6 SER7 PRO8 HIS9 SER10 LEU11 ALA12 VAL13 THR14 PRO15 GLY16 GLU17 PRO18 ALA19 SER20 ILE21 SER22 CYS23 ARG24 SER25 SER26 GLN27 SER27A LEU27B LEU27C LEU27D GLY27E ASN28 GLY29 ARG30 ASN31 TYR32 LEU33 ASP34 TRP35 TYR36 VAL37 GLN38 LYS39 PRO40 GLY41 GLN42 SER43 PRO44 GLN45 LEU46 LEU47 ILE48 TYR49 LEU50 GLY51 SER52 ASN53 ARG54 ALA55 SER56 GLY57 VAL58 PRO59 ASP60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 TYR70 PHE71 THR72 LEU73 LYS74 ILE75 SER76 ARG77 VAL78 GLU79 ALA80 GLU81 ASP82 VAL83 GLY84 PHE85 TYR86 TYR87 CYS88 MET89 GLU90 ALA91 ARG92 GLN93 THR94 PRO95 ARG95A LEU96 THR97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 ARG107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany