5EUL - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE SECA-SECY COMPLEX WITH A TRANSLOCATING POLY SUBSTRATE
• Keywords: SECY, SECA, ATPASE, CHANNEL, PROTEIN TRANSPORT
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5EUL	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROTEIN TRANSLOCASE SUBUNIT SECA, INSERTION PEPTI CHIMERA	A	746	5876	0
2	Protein	PROTEIN TRANSLOCASE SUBUNIT SECY	Y	380	2936	0
3	Protein	PREPROTEIN TRANSLOCASE SECE SUBUNIT	E	56	460	0
4	Protein	AYC08	V	115	883	0
5	Ligand	PROTEIN TRANSLOCASE SUBUNIT SECA, INSERTION PEPTI CHIMERA	A	18	0	302
6	Ligand	PROTEIN TRANSLOCASE SUBUNIT SECY	Y	3	0	54
total				1318	10155	356

Proteins

Unit 1	ARG 14 THR 15 LEU 16 ASN 17 ARG 18 TYR 19 GLU 20 LYS 21 ILE 22 ALA 23 ASN 24 ASP 25 ILE 26 ASP 27 ALA 28 ILE 29 ARG 30 GLY 31 ASP 32 TYR 33 GLU 34 ASN 35 LEU 36 SER 37 ASP 38 ASP 39 ALA 40 LEU 41 LYS 42 HIS 43 LYS 44 THR 45 ILE 46 GLU 47 PHE 48 LYS 49 GLU 50 ARG 51 LEU 52 GLU 53 LYS 54 GLY 55 ALA 56 THR 57 THR 58 ASP 59 ASP 60 LEU 61 LEU 62 VAL 63 GLU 64 ALA 65 PHE 66 ALA 67 VAL 68 VAL 69 ARG 70 GLU 71 ALA 72 SER 73 ARG 74 ARG 75 VAL 76 THR 77 GLY 78 MET 79 PHE 80 PRO 81 PHE 82 LYS 83 VAL 84 GLN 85 LEU 86 MET 87 GLY 88 GLY 89 VAL 90 ALA 91 LEU 92 HIS 93 ASP 94 GLY 95 ASN 96 ILE 97 ALA 98 GLU 99 MET 100 LYS 101 THR 102 GLY 103 GLU 104 GLY 105 LYS 106 THR 107 LEU 108 THR 109 SER 110 THR 111 LEU 112 PRO 113 VAL 114 TYR 115 LEU 116 ASN 117 ALA 118 LEU 119 THR 120 GLY 121 LYS 122 GLY 123 VAL 124 HIS 125 VAL 126 VAL 127 THR 128 VAL 129 ASN 130 GLU 131 TYR 132 LEU 133 ALA 134 SER 135 ARG 136 ASP 137 ALA 138 GLU 139 GLN 140 MET 141 GLY 142 LYS 143 ILE 144 PHE 145 GLU 146 PHE 147 LEU 148 GLY 149 LEU 150 THR 151 VAL 152 GLY 153 LEU 154 ASN 155 LEU 156 ASN 157 SER 158 MET 159 SER 160 LYS 161 ASP 162 GLU 163 LYS 164 ARG 165 GLU 166 ALA 167 TYR 168 ALA 169 ALA 170 ASP 171 ILE 172 THR 173 TYR 174 SER 175 THR 176 ASN 177 ASN 178 GLU 179 LEU 180 GLY 181 PHE 182 ASP 183 TYR 184 LEU 185 ARG 186 ASP 187 ASN 188 MET 189 VAL 190 LEU 191 TYR 192 LYS 193 GLU 194 GLN 195 MET 196 VAL 197 GLN 198 ARG 199 PRO 200 LEU 201 HIS 202 PHE 203 ALA 204 VAL 205 ILE 206 ASP 207 GLU 208 VAL 209 ASP 210 SER 211 ILE 212 LEU 213 ILE 214 ASP 215 GLU 216 ALA 217 ARG 218 THR 219 PRO 220 LEU 221 ILE 222 ILE 223 SER 224 GLY 225 GLN 226 ALA 227 ALA 228 LYS 229 SER 230 THR 231 LYS 232 LEU 233 TYR 234 VAL 235 GLN 236 ALA 237 ASN 238 ALA 239 PHE 240 VAL 241 ARG 242 THR 243 LEU 244 LYS 245 TYR 250 THR 251 TYR 252 ASP 253 ILE 254 LYS 255 THR 256 LYS 257 ALA 258 VAL 259 GLN 260 LEU 261 THR 262 GLU 263 GLU 264 GLY 265 MET 266 THR 267 LYS 268 ALA 269 GLU 270 LYS 271 ALA 272 PHE 273 GLY 274 ILE 275 ASP 276 ASN 277 LEU 278 PHE 279 ASP 280 VAL 281 LYS 282 HIS 283 VAL 284 ALA 285 LEU 286 ASN 287 HIS 288 HIS 289 ILE 290 ASN 291 GLN 292 ALA 293 LEU 294 LYS 295 ALA 296 HIS 297 VAL 298 ALA 299 MET 300 GLN 301 LYS 302 ASP 303 VAL 304 ASP 305 TYR 306 VAL 307 VAL 308 GLU 309 ASP 310 GLY 311 GLN 312 VAL 313 VAL 314 ILE 315 VAL 316 ASP 317 SER 318 PHE 319 THR 320 GLY 321 ARG 322 LEU 323 MET 324 LYS 325 GLY 326 ARG 327 ARG 328 TYR 329 SER 330 GLU 331 GLY 332 LEU 333 HIS 334 GLN 335 ALA 336 ILE 337 GLU 338 ALA 339 LYS 340 GLU 341 GLY 342 LEU 343 GLU 344 ILE 345 GLN 346 ASN 347 GLU 348 SER 349 MET 350 THR 351 LEU 352 ALA 353 THR 354 ILE 355 THR 356 PHE 357 GLN 358 ASN 359 TYR 360 PHE 361 ARG 362 MET 363 TYR 364 GLU 365 LYS 366 LEU 367 ALA 368 GLY 369 MET 370 THR 371 GLY 372 THR 373 ALA 374 LYS 375 THR 376 GLU 377 GLU 378 GLU 379 GLU 380 PHE 381 ARG 382 ASN 383 ILE 384 TYR 385 ASN 386 MET 387 GLN 388 VAL 389 VAL 390 THR 391 ILE 392 PRO 393 THR 394 ASN 395 ARG 396 PRO 397 VAL 398 VAL 399 ARG 400 ASP 401 ASP 402 ARG 403 PRO 404 ASP 405 LEU 406 ILE 407 TYR 408 ARG 409 THR 410 MET 411 GLU 412 GLY 413 LYS 414 PHE 415 LYS 416 ALA 417 VAL 418 ALA 419 GLU 420 ASP 421 VAL 422 ALA 423 GLN 424 ARG 425 TYR 426 MET 427 THR 428 GLY 429 GLN 430 PRO 431 VAL 432 LEU 433 VAL 434 GLY 435 THR 436 VAL 437 ALA 438 VAL 439 GLU 440 THR 441 SER 442 GLU 443 LEU 444 ILE 445 SER 446 LYS 447 LEU 448 LEU 449 LYS 450 ASN 451 LYS 452 GLY 453 ILE 454 PRO 455 HIS 456 GLN 457 VAL 458 LEU 459 ASN 460 ALA 461 LYS 462 ASN 463 HIS 464 GLU 465 ARG 466 GLU 467 ALA 468 GLN 469 ILE 470 ILE 471 GLU 472 GLU 473 ALA 474 GLY 475 GLN 476 LYS 477 GLY 478 ALA 479 VAL 480 THR 481 ILE 482 ALA 483 THR 484 ASN 485 MET 486 ALA 487 GLY 488 THR 491 ASP 492 ILE 493 LYS 494 LEU 495 GLY 496 GLU 497 GLY 498 VAL 499 LYS 500 GLU 501 LEU 502 GLY 503 GLY 504 LEU 505 ALA 506 VAL 507 VAL 508 GLY 509 THR 510 GLU 511 ARG 512 HIS 513 GLU 514 SER 515 ARG 516 ARG 517 ILE 518 ASP 519 ASN 520 GLN 521 LEU 522 ARG 523 GLY 524 ARG 525 SER 526 GLY 527 ARG 528 GLN 529 GLY 530 ASP 531 PRO 532 GLY 533 ILE 534 THR 535 GLN 536 PHE 537 TYR 538 LEU 539 SER 540 MET 541 GLU 542 ASP 543 GLU 544 LEU 545 MET 546 ARG 547 ARG 548 PHE 549 GLY 550 ALA 551 GLU 552 ARG 553 THR 554 MET 555 ALA 556 MET 557 LEU 558 ASP 559 ARG 560 PHE 561 GLY 562 MET 563 ASP 564 ASP 565 SER 566 THR 567 PRO 568 ILE 569 GLN 570 SER 571 LYS 572 MET 573 VAL 574 SER 575 ARG 576 ALA 577 VAL 578 GLU 579 SER 580 SER 581 GLN 582 LYS 583 ARG 584 VAL 585 GLU 586 GLY 587 ASN 588 ASN 589 PHE 590 ASP 591 SER 592 ARG 593 LYS 594 GLN 595 LEU 596 LEU 597 GLN 598 TYR 599 ASP 600 ASP 601 VAL 602 LEU 603 ARG 604 GLN 605 GLN 606 ARG 607 GLU 608 VAL 609 ILE 610 TYR 611 LYS 612 GLN 613 ARG 614 PHE 615 GLU 616 VAL 617 ILE 618 ASP 619 GLU 625 ILE 626 VAL 627 GLU 628 ASN 629 MET 630 ILE 631 LYS 632 SER 633 SER 634 LEU 635 GLU 636 ARG 637 ALA 638 ILE 639 ALA 640 ALA 641 TYR 642 MET 684 LEU 685 GLU 686 LEU 687 ILE 688 MET 689 ASP 690 ARG 691 ILE 692 ILE 693 THR 694 LYS 695 TYR 696 ASN 697 GLU 698 LYS 699 GLU 706 GLN 707 MET 708 ARG 709 GLU 710 PHE 711 GLU 712 LYS 713 VAL 714 ILE 715 VAL 716 LEU 717 ARG 718 ALA 719 VAL 720 ASP 721 SER 722 LYS 723 TRP 724 MET 725 ASP 726 HIS 727 ILE 728 ASP 729 ALA 730 MET 731 ASP 732 GLN 733 LEU 734 ARG 735 GLN 736 GLY 737 ILE 738 HIS 739 LEU 740 ARG 741 GLY 742 SER 743 LYS 749 LYS 750 THR 751 ALA 752 ILE 753 ALA 754 ILE 755 ALA 756 VAL 757 ALA 758 LEU 759 ALA 760 GLY 761 PHE 762 ALA 763 THR 764 VAL 765 ALA 766 SER 767 TYR 768 ALA 769 GLN 770 TYR 771 GLU 772 ASP 773 GLY 774 CYS 775 SER 776 GLY 777 GLU 778 LEU 779 GLU 780 ARG 781 GLN 782 HIS 783 THR 784 PHE 785 ALA 786 GLY 787 GLY 788 PRO 789 GLY 790 ALA 791 PRO 795 LEU 796 ARG 797 GLU 798 TYR 799 GLN 800 MET 801 GLU 802 GLY 803 PHE 804 ALA 805 MET 806 PHE 807 GLU 808 HIS 809 MET 810 ILE 811 GLU 812 SER 813 ILE 814 GLU 815 ASP 816 GLU 817 VAL 818 ALA 819 LYS 820 PHE 821 VAL 822 MET 823 LYS 824 ALA 825
Unit 2	ASP 13 ILE 14 ARG 15 ASN 16 LYS 17 ILE 18 ILE 19 PHE 20 THR 21 LEU 22 LEU 23 MET 24 LEU 25 ILE 26 VAL 27 PHE 28 ARG 29 ILE 30 GLY 31 THR 32 PHE 33 ILE 34 PRO 35 VAL 36 PRO 37 SER 38 VAL 39 ASN 40 THR 41 ASP 42 VAL 43 LEU 44 LYS 45 LEU 46 GLN 47 ASP 48 GLN 49 LEU 50 ASN 51 ALA 52 PHE 53 GLY 54 VAL 55 LEU 56 ASN 57 ILE 58 PHE 59 CYS 60 GLY 61 GLY 62 ALA 63 LEU 64 GLN 65 ASN 66 PHE 67 SER 68 ILE 69 PHE 70 ALA 71 MET 72 GLY 73 VAL 74 MET 75 PRO 76 TYR 77 ILE 78 THR 79 ALA 80 SER 81 ILE 82 ILE 83 VAL 84 GLN 85 LEU 86 LEU 87 GLN 88 MET 89 ASP 90 VAL 91 VAL 92 PRO 93 LYS 94 PHE 95 ALA 96 GLU 97 TRP 98 SER 99 LYS 100 GLN 101 GLY 102 GLU 103 MET 104 GLY 105 ARG 106 ARG 107 LYS 108 LEU 109 ALA 110 GLN 111 PHE 112 THR 113 ARG 114 TYR 115 PHE 116 THR 117 ILE 118 VAL 119 LEU 120 GLY 121 PHE 122 ILE 123 GLN 124 ALA 125 LEU 126 GLY 127 MET 128 SER 129 TYR 130 GLY 131 PHE 132 ASN 133 ASN 134 LEU 135 ALA 136 GLY 137 GLY 138 MET 139 LEU 140 ILE 141 GLN 142 ASN 143 PRO 144 ILE 146 GLY 147 THR 148 TYR 149 LEU 150 LEU 151 ILE 152 ALA 153 VAL 154 VAL 155 LEU 156 THR 157 ALA 158 GLY 159 THR 160 ALA 161 PHE 162 LEU 163 MET 164 TRP 165 LEU 166 GLY 167 GLU 168 GLN 169 ILE 170 THR 171 ALA 172 LYS 173 GLY 174 VAL 175 GLY 176 ASN 177 GLY 178 ILE 179 SER 180 ILE 181 ILE 182 ILE 183 PHE 184 ALA 185 GLY 186 ILE 187 VAL 188 SER 189 GLY 190 ILE 191 PRO 192 THR 193 ILE 194 LEU 195 ASN 196 GLN 197 ILE 198 TYR 199 ALA 200 ILE 214 VAL 215 ARG 216 LEU 217 LEU 218 LEU 219 VAL 220 ALA 221 LEU 222 ALA 223 VAL 224 VAL 225 ALA 226 VAL 227 ILE 228 VAL 229 GLY 230 VAL 231 ILE 232 TYR 233 ILE 234 GLN 235 GLN 236 ALA 237 PHE 238 ARG 239 LYS 240 ILE 241 PRO 242 ILE 243 GLN 244 SER 259 THR 260 HIS 261 LEU 262 PRO 263 LEU 264 LYS 265 VAL 266 ASN 267 PRO 273 VAL 274 ILE 275 PHE 276 ALA 277 VAL 278 SER 279 PHE 280 LEU 281 ILE 282 ALA 283 PRO 284 PRO 285 THR 286 ILE 287 ALA 288 SER 289 PHE 290 PHE 291 GLY 292 THR 293 ASN 294 ASP 295 ARG 301 ARG 302 THR 303 PHE 304 ASP 305 TYR 306 THR 307 HIS 308 PRO 309 VAL 310 GLY 311 MET 312 THR 313 ILE 314 TYR 315 VAL 316 VAL 317 LEU 318 ILE 319 ILE 320 ALA 321 PHE 322 THR 323 TYR 324 PHE 325 TYR 326 ALA 327 PHE 328 VAL 329 GLN 330 VAL 331 ASN 332 PRO 333 GLU 334 GLN 335 MET 336 ALA 337 ASP 338 ASN 339 LEU 340 LYS 341 LYS 342 GLN 343 GLY 344 GLY 345 TYR 346 ILE 347 PRO 348 GLY 349 ILE 350 ARG 351 PRO 352 GLY 353 LYS 354 ASN 355 THR 356 GLN 357 GLU 358 TYR 359 VAL 360 THR 361 ARG 362 ILE 363 LEU 364 TYR 365 ARG 366 LEU 367 THR 368 LEU 369 VAL 370 GLY 371 SER 372 LEU 373 PHE 374 LEU 375 ALA 376 PHE 377 ILE 378 ALA 379 VAL 380 LEU 381 PRO 382 VAL 383 PHE 384 PHE 385 VAL 386 ASN 387 PHE 388 ALA 389 ASN 390 LEU 391 PRO 392 PRO 393 SER 394 ALA 395 GLN 396 ILE 397 GLY 398 GLY 399 THR 400 SER 401 LEU 402 LEU 403 ILE 404 VAL 405 VAL 406 GLY 407 VAL 408 ALA 409 LEU 410 GLU 411 THR 412 MET 413 LYS 414 GLN 415 LEU 416 GLU 417 SER 418 GLN 419 LEU 420 VAL 421 LYS 422 ARG 423 HIS 424 TYR 425 ARG 426 GLY 427 PHE 428 ILE 429 LYS 430
Unit 3	GLN 2 ARG 3 VAL 4 THR 5 ASN 6 PHE 7 PHE 8 LYS 9 GLU 10 VAL 11 VAL 12 ARG 13 GLU 14 LEU 15 LYS 16 LYS 17 VAL 18 SER 19 TRP 20 PRO 21 ASN 22 ARG 23 LYS 24 GLU 25 LEU 26 VAL 27 ASN 28 TYR 29 THR 30 ALA 31 VAL 32 VAL 33 LEU 34 ALA 35 THR 36 VAL 37 ALA 38 PHE 39 PHE 40 THR 41 VAL 42 PHE 43 PHE 44 ALA 45 VAL 46 ILE 47 ASP 48 LEU 49 GLY 50 ILE 51 SER 52 GLN 53 LEU 54 ILE 55 ARG 56 LEU 57
Unit 4	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 THR 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 GLY 23 ALA 24 SER 25 GLY 26 SER 27 ILE 28 PHE 29 ASN 30 TYR 32 ALA 33 MET 34 GLY 35 TRP 36 TYR 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLN 44 ARG 45 GLU 46 VAL 47 VAL 48 ALA 49 ARG 50 ILE 51 ALA 52 THR 53 ASP 54 ASP 55 SER 56 THR 57 MET 58 TYR 59 PRO 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 ALA 74 LYS 75 ASN 76 THR 77 VAL 78 TYR 79 LEU 80 GLN 81 MET 82 ASN 83 SER 84 LEU 85 LYS 86 PRO 87 GLU 88 ASP 89 THR 90 ALA 91 VAL 92 TYR 93 TYR 94 CYS 95 TYR 96 TYR 97 GLN 98 ARG 99 THR 100 VAL 101 MET 102 SER 103 GLN 104 PRO 105 TYR 106 TRP 107 GLY 108 GLN 109 GLY 110 THR 111 GLN 112 VAL 113 THR 114 VAL 115 SER 116

Ligands

Unit 5	MG 1001 BEF 1002 ADP 1003 TBR 1004 TBR 1005 TBR 1006 TBR 1007 TBR 1008 TBR 1009 TBR 1010 TBR 1011 TBR 1012 TBR 1013 TBR 1014 TBR 1015 TBR 1016 TBR 1017 TBR 1018
Unit 6	TBR 501 TBR 502 TBR 503