5ESP - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF LAGLIDADG MEGANUCLEASE I-PANMI WITH COO CALCIUM IONS
• Keywords: HYDROLASE-DNA COMPLEX, LAGLIDADG, HOMING ENDONUCLEASE, MEGAN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5ESP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	I-PANMI	A	292	2302	0
2	Protein	I-PANMI	B	288	2206	0
3	Other macromolecule	DNA (27-MER)	G	27	538	0
4	Other macromolecule	DNA (27-MER)	H	27	569	0
5	Other macromolecule	DNA (27-MER)	C	26	519	0
6	Other macromolecule	DNA (27-MER)	D	27	569	0
7	Ligand	I-PANMI	A	2	0	2
8	Ligand	I-PANMI	B	2	0	2
9	Ligand	DNA (27-MER)	H	1	0	14
10	Ligand	DNA (27-MER)	D	1	0	14
11	Water			2	0	2
total				695	6703	34

Proteins

Unit 1

LYS 7 LEU 8 ASN 9 PRO 10 SER 11 TYR 12 ILE 13 SER 14 GLY 15 PHE 16 VAL 17 ASP 18 GLY 19 GLU 20 GLY 21 SER 22 PHE 23 MET 24 LEU 25 THR 26 ILE 27 ILE 28 LYS 29 ASP 30 ASN 31 LYS 32 TYR 33 LYS 34 LEU 35 GLY 36 TRP 37 ARG 38 VAL 39 VAL 40 CYS 41 ARG 42 PHE 43 VAL 44 ILE 45 SER 46 LEU 47 HIS 48 LYS 49 LYS 50 ASP 51 LEU 52 SER 53 LEU 54 LEU 55 ASN 56 LYS 57 ILE 58 LYS 59 GLU 60 PHE 61 PHE 62 ASP 63 VAL 64 GLY 65 ASN 66 VAL 67 PHE 68 LEU 69 MET 70 THR 71 LYS 72 ASP 73 SER 74 ALA 75 GLN 76 TYR 77 ARG 78 VAL 79 GLU 80 SER 81 LEU 82 LYS 83 GLY 84 LEU 85 ASP 86 LEU 87 ILE 88 ILE 89 ASN 90 HIS 91 PHE 92 ASP 93 LYS 94 TYR 95 PRO 96 LEU 97 ILE 98 THR 99 LYS 100 LYS 101 GLN 102 ALA 103 ASP 104 TYR 105 LYS 106 LEU 107 PHE 108 LYS 109 MET 110 ALA 111 HIS 112 ASN 113 LEU 114 ILE 115 LYS 116 ASN 117 LYS 118 SER 119 HIS 120 LEU 121 THR 122 LYS 123 GLU 124 GLY 125 LEU 126 LEU 127 GLU 128 LEU 129 VAL 130 ALA 131 ILE 132 LYS 133 ALA 134 VAL 135 ILE 136 ASN 137 ASN 138 GLY 139 LEU 140 ASN 141 ASN 142 ASP 143 LEU 144 SER 145 ILE 146 ALA 147 PHE 148 PRO 149 GLY 150 ILE 151 ASN 152 THR 153 ILE 154 LEU 155 ARG 156 PRO 157 ASP 158 THR 159 SER 160 LEU 161 PRO 162 GLN 163 ILE 164 LEU 165 ASN 166 PRO 167 PHE 168 TRP 169 LEU 170 SER 171 GLY 172 PHE 173 VAL 174 ASP 175 ALA 176 GLU 177 GLY 178 CYS 179 PHE 180 SER 181 VAL 182 VAL 183 VAL 184 PHE 185 LYS 186 SER 187 LYS 188 THR 189 SER 190 LYS 191 LEU 192 GLY 193 GLU 194 ALA 195 VAL 196 LYS 197 LEU 198 SER 199 PHE 200 ILE 201 LEU 202 THR 203 GLN 204 SER 205 ASN 206 ARG 207 ASP 208 GLU 209 TYR 210 LEU 211 ILE 212 LYS 213 SER 214 LEU 215 ILE 216 GLU 217 TYR 218 LEU 219 GLY 220 CYS 221 GLY 222 ASN 223 THR 224 SER 225 LEU 226 ASP 227 PRO 228 ARG 229 GLY 230 THR 231 ILE 232 ASP 233 PHE 234 LYS 235 VAL 236 THR 237 ASN 238 PHE 239 SER 240 SER 241 ILE 242 LYS 243 ASP 244 ILE 245 ILE 246 VAL 247 PRO 248 PHE 249 PHE 250 ILE 251 LYS 252 TYR 253 PRO 254 LEU 255 LYS 256 GLY 257 ASN 258 LYS 259 ASN 260 LEU 261 ASP 262 PHE 263 THR 264 ASP 265 PHE 266 CYS 267 GLU 268 VAL 269 VAL 270 ARG 271 LEU 272 MET 273 GLU 274 ASN 275 LYS 276 SER 277 HIS 278 LEU 279 THR 280 LYS 281 GLU 282 GLY 283 LEU 284 ASP 285 GLN 286 ILE 287 LYS 288 LYS 289 ILE 290 ARG 291 ASN 292 ARG 293 MET 294 ASN 295 THR 296 ASN 297 ARG 298

Unit 2

LYS 7 LEU 8 ASN 9 PRO 10 SER 11 TYR 12 ILE 13 SER 14 GLY 15 PHE 16 VAL 17 ASP 18 GLY 19 GLU 20 GLY 21 SER 22 PHE 23 MET 24 LEU 25 THR 26 ILE 27 ILE 28 LYS 29 ASP 30 ASN 31 LYS 32 TYR 33 LYS 34 LEU 35 GLY 36 TRP 37 ARG 38 VAL 39 VAL 40 CYS 41 ARG 42 PHE 43 VAL 44 ILE 45 SER 46 LEU 47 HIS 48 LYS 49 LYS 50 ASP 51 LEU 52 SER 53 LEU 54 LEU 55 ASN 56 LYS 57 ILE 58 LYS 59 GLU 60 PHE 61 PHE 62 ASP 63 VAL 64 GLY 65 ASN 66 VAL 67 PHE 68 LEU 69 MET 70 THR 71 LYS 72 ASP 73 SER 74 ALA 75 GLN 76 TYR 77 ARG 78 VAL 79 GLU 80 SER 81 LEU 82 LYS 83 GLY 84 LEU 85 ASP 86 LEU 87 ILE 88 ILE 89 ASN 90 HIS 91 PHE 92 ASP 93 LYS 94 TYR 95 PRO 96 LEU 97 ILE 98 THR 99 LYS 100 LYS 101 GLN 102 ALA 103 ASP 104 TYR 105 LYS 106 LEU 107 PHE 108 LYS 109 MET 110 ALA 111 HIS 112 ASN 113 LEU 114 ILE 115 LYS 116 ASN 117 LYS 118 SER 119 HIS 120 LEU 121 THR 122 LYS 123 GLU 124 GLY 125 LEU 126 LEU 127 GLU 128 LEU 129 VAL 130 ALA 131 ILE 132 LYS 133 ALA 134 VAL 135 ILE 136 ASN 137 ASN 138 GLY 139 LEU 140 ASN 141 ASN 142 ASP 143 LEU 144 SER 145 ILE 146 ALA 147 PHE 148 PRO 149 GLY 150 ILE 151 ASN 152 THR 153 ILE 154 LEU 155 ARG 156 PRO 157 ASP 158 THR 159 SER 160 LEU 161 PRO 162 GLN 163 ILE 164 LEU 165 ASN 166 PRO 167 PHE 168 TRP 169 LEU 170 SER 171 GLY 172 PHE 173 VAL 174 ASP 175 ALA 176 GLU 177 GLY 178 CYS 179 PHE 180 SER 181 VAL 182 VAL 183 VAL 184 THR 189 SER 190 LYS 191 LEU 192 GLY 193 GLU 194 ALA 195 VAL 196 LYS 197 LEU 198 SER 199 PHE 200 ILE 201 LEU 202 THR 203 GLN 204 SER 205 ASN 206 ARG 207 ASP 208 GLU 209 TYR 210 LEU 211 ILE 212 LYS 213 SER 214 LEU 215 ILE 216 GLU 217 TYR 218 LEU 219 GLY 220 CYS 221 GLY 222 ASN 223 THR 224 SER 225 LEU 226 ASP 227 PRO 228 ARG 229 GLY 230 THR 231 ILE 232 ASP 233 PHE 234 LYS 235 VAL 236 THR 237 ASN 238 PHE 239 SER 240 SER 241 ILE 242 LYS 243 ASP 244 ILE 245 ILE 246 VAL 247 PRO 248 PHE 249 PHE 250 ILE 251 LYS 252 TYR 253 PRO 254 LEU 255 LYS 256 GLY 257 ASN 258 LYS 259 ASN 260 LEU 261 ASP 262 PHE 263 THR 264 ASP 265 PHE 266 CYS 267 GLU 268 VAL 269 VAL 270 ARG 271 LEU 272 MET 273 GLU 274 ASN 275 LYS 276 SER 277 HIS 278 LEU 279 THR 280 LYS 281 GLU 282 GLY 283 LEU 284 ASP 285 GLN 286 ILE 287 LYS 288 LYS 289 ILE 290 ARG 291 ASN 292 ARG 293 MET 294 ASN 295 THR 296 ASN 297 ARG 298

Other macromolecules

Unit 3	DC 1 DC 2 DC 3 DG 4 DC 5 DT 6 DC 7 DC 8 DT 9 DC 10 DA 11 DT 12 DA 13 DA 14 DT 15 DC 16 DC 17 DT 18 DT 19 DA 20 DT 21 DC 22 DA 23 DA 24 DG 25 DC 26 DC 27
Unit 4	DG 1 DG 2 DG 3 DC 4 DT 5 DT 6 DG 7 DA 8 DT 9 DA 10 DA 11 DG 12 DG 13 DA 14 DT 15 DT 16 DA 17 DT 18 DG 19 DA 20 DG 21 DG 22 DA 23 DG 24 DC 25 DG 26 DG 27
Unit 5	DC 1 DC 2 DC 3 DG 4 DC 5 DT 6 DC 7 DC 8 DT 9 DC 10 DA 11 DT 12 DA 13 DA 14 DT 15 DC 16 DC 17 DT 18 DT 19 DA 20 DT 21 DC 22 DA 23 DA 24 DG 25 DC 26
Unit 6	DG 1 DG 2 DG 3 DC 4 DT 5 DT 6 DG 7 DA 8 DT 9 DA 10 DA 11 DG 12 DG 13 DA 14 DT 15 DT 16 DA 17 DT 18 DG 19 DA 20 DG 21 DG 22 DA 23 DG 24 DC 25 DG 26 DG 27

Ligands

Unit 7	CA 301 CA 302
Unit 8	CA 301 CA 302
Unit 9	GOL 101
Unit 10	GOL 101