Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE KH DOMAIN OF T-STAR IN COMPLEX WITH AAAUAA
Keywords PROTEIN - RNA COMPLEXES STAR PROTEIN ALTERNATIVE SPLICING KH RNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5ELS     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  A 113 902 0
2  Protein   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  B 113 902 0
3  Protein   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  C 113 902 0
4  Protein   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  D 111 882 0
5  Protein   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  E 110 874 0
6  Protein   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  F 112 894 0
7  RNA    H 6 130 0
8  RNA    I 6 130 0
9  Ligand   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  A 1 0 5
10  Ligand   KH DOMAIN-CONTAINING, RNA-BINDING, SIGNAL TRANSDU ASSOCIATED PROTEIN 3  B 2 0 10
total       687 5616 15

Proteins
Unit 1 GLY48 ALA49 ILE50 ASN51 LYS52 ASN53 MET54 LYS55 LEU56 GLY57 GLN58 LYS59 VAL60 LEU61 ILE62 PRO63 VAL64 LYS65 GLN66 PHE67 PRO68 LYS69 PHE70 ASN71 PHE72 VAL73 GLY74 LYS75 LEU76 LEU77 GLY78 PRO79 ARG80 GLY81 ASN82 SER83 LEU84 LYS85 ARG86 LEU87 GLN88 GLU89 GLU90 THR91 LEU92 THR93 LYS94 MET95 SER96 ILE97 LEU98 GLY99 LYS100 GLY101 SER102 MET103 ARG104 ASP105 LYS106 ALA107 LYS108 GLU109 GLU110 GLU111 LEU112 ARG113 LYS114 SER115 GLY116 GLU117 ALA118 LYS119 TYR120 PHE121 HIS122 LEU123 ASN124 ASP125 ASP126 LEU127 HIS128 VAL129 LEU130 ILE131 GLU132 VAL133 PHE134 ALA135 PRO136 PRO137 ALA138 GLU139 ALA140 TYR141 ALA142 ARG143 MET144 GLY145 HIS146 ALA147 LEU148 GLU149 GLU150 ILE151 LYS152 LYS153 PHE154 LEU155 ILE156 PRO157 ASP158 TYR159 ASN160
Unit 2 GLY48 ALA49 ILE50 ASN51 LYS52 ASN53 MET54 LYS55 LEU56 GLY57 GLN58 LYS59 VAL60 LEU61 ILE62 PRO63 VAL64 LYS65 GLN66 PHE67 PRO68 LYS69 PHE70 ASN71 PHE72 VAL73 GLY74 LYS75 LEU76 LEU77 GLY78 PRO79 ARG80 GLY81 ASN82 SER83 LEU84 LYS85 ARG86 LEU87 GLN88 GLU89 GLU90 THR91 LEU92 THR93 LYS94 MET95 SER96 ILE97 LEU98 GLY99 LYS100 GLY101 SER102 MET103 ARG104 ASP105 LYS106 ALA107 LYS108 GLU109 GLU110 GLU111 LEU112 ARG113 LYS114 SER115 GLY116 GLU117 ALA118 LYS119 TYR120 PHE121 HIS122 LEU123 ASN124 ASP125 ASP126 LEU127 HIS128 VAL129 LEU130 ILE131 GLU132 VAL133 PHE134 ALA135 PRO136 PRO137 ALA138 GLU139 ALA140 TYR141 ALA142 ARG143 MET144 GLY145 HIS146 ALA147 LEU148 GLU149 GLU150 ILE151 LYS152 LYS153 PHE154 LEU155 ILE156 PRO157 ASP158 TYR159 ASN160
Unit 3 GLY48 ALA49 ILE50 ASN51 LYS52 ASN53 MET54 LYS55 LEU56 GLY57 GLN58 LYS59 VAL60 LEU61 ILE62 PRO63 VAL64 LYS65 GLN66 PHE67 PRO68 LYS69 PHE70 ASN71 PHE72 VAL73 GLY74 LYS75 LEU76 LEU77 GLY78 PRO79 ARG80 GLY81 ASN82 SER83 LEU84 LYS85 ARG86 LEU87 GLN88 GLU89 GLU90 THR91 LEU92 THR93 LYS94 MET95 SER96 ILE97 LEU98 GLY99 LYS100 GLY101 SER102 MET103 ARG104 ASP105 LYS106 ALA107 LYS108 GLU109 GLU110 GLU111 LEU112 ARG113 LYS114 SER115 GLY116 GLU117 ALA118 LYS119 TYR120 PHE121 HIS122 LEU123 ASN124 ASP125 ASP126 LEU127 HIS128 VAL129 LEU130 ILE131 GLU132 VAL133 PHE134 ALA135 PRO136 PRO137 ALA138 GLU139 ALA140 TYR141 ALA142 ARG143 MET144 GLY145 HIS146 ALA147 LEU148 GLU149 GLU150 ILE151 LYS152 LYS153 PHE154 LEU155 ILE156 PRO157 ASP158 TYR159 ASN160
Unit 4 GLY48 ALA49 ILE50 ASN51 LYS52 ASN53 MET54 LYS55 LEU56 GLY57 GLN58 LYS59 VAL60 LEU61 ILE62 PRO63 VAL64 LYS65 GLN66 PHE67 PRO68 LYS69 PHE70 ASN71 PHE72 VAL73 GLY74 LYS75 LEU76 LEU77 GLY78 PRO79 ARG80 GLY81 ASN82 SER83 LEU84 LYS85 ARG86 LEU87 GLN88 GLU89 GLU90 THR91 LEU92 THR93 LYS94 MET95 SER96 ILE97 LEU98 GLY99 LYS100 GLY101 SER102 MET103 ARG104 ASP105 LYS106 ALA107 LYS108 GLU109 GLU110 GLU111 LEU112 ARG113 LYS114 SER115 GLY116 GLU117 ALA118 LYS119 TYR120 PHE121 HIS122 LEU123 ASN124 ASP125 ASP126 LEU127 HIS128 VAL129 LEU130 ILE131 GLU132 VAL133 PHE134 ALA135 PRO136 PRO137 ALA138 GLU139 ALA140 TYR141 ALA142 ARG143 MET144 GLY145 HIS146 ALA147 LEU148 GLU149 GLU150 ILE151 LYS152 LYS153 PHE154 LEU155 ILE156 PRO157 ASP158
Unit 5 GLY48 ALA49 ILE50 ASN51 LYS52 ASN53 MET54 LYS55 LEU56 GLY57 GLN58 LYS59 VAL60 LEU61 ILE62 PRO63 VAL64 LYS65 GLN66 PHE67 PRO68 LYS69 PHE70 ASN71 PHE72 VAL73 GLY74 LYS75 LEU76 LEU77 GLY78 PRO79 ARG80 GLY81 ASN82 SER83 LEU84 LYS85 ARG86 LEU87 GLN88 GLU89 GLU90 THR91 LEU92 THR93 LYS94 MET95 SER96 ILE97 LEU98 GLY99 LYS100 GLY101 SER102 MET103 ARG104 ASP105 LYS106 ALA107 LYS108 GLU109 GLU110 GLU111 LEU112 ARG113 LYS114 SER115 GLY116 GLU117 ALA118 LYS119 TYR120 PHE121 HIS122 LEU123 ASN124 ASP125 ASP126 LEU127 HIS128 VAL129 LEU130 ILE131 GLU132 VAL133 PHE134 ALA135 PRO136 PRO137 ALA138 GLU139 ALA140 TYR141 ALA142 ARG143 MET144 GLY145 HIS146 ALA147 LEU148 GLU149 GLU150 ILE151 LYS152 LYS153 PHE154 LEU155 ILE156 PRO157
Unit 6 GLY48 ALA49 ILE50 ASN51 LYS52 ASN53 MET54 LYS55 LEU56 GLY57 GLN58 LYS59 VAL60 LEU61 ILE62 PRO63 VAL64 LYS65 GLN66 PHE67 PRO68 LYS69 PHE70 ASN71 PHE72 VAL73 GLY74 LYS75 LEU76 LEU77 GLY78 PRO79 ARG80 GLY81 ASN82 SER83 LEU84 LYS85 ARG86 LEU87 GLN88 GLU89 GLU90 THR91 LEU92 THR93 LYS94 MET95 SER96 ILE97 LEU98 GLY99 LYS100 GLY101 SER102 MET103 ARG104 ASP105 LYS106 ALA107 LYS108 GLU109 GLU110 GLU111 LEU112 ARG113 LYS114 SER115 GLY116 GLU117 ALA118 LYS119 TYR120 PHE121 HIS122 LEU123 ASN124 ASP125 ASP126 LEU127 HIS128 VAL129 LEU130 ILE131 GLU132 VAL133 PHE134 ALA135 PRO136 PRO137 ALA138 GLU139 ALA140 TYR141 ALA142 ARG143 MET144 GLY145 HIS146 ALA147 LEU148 GLU149 GLU150 ILE151 LYS152 LYS153 PHE154 LEU155 ILE156 PRO157 ASP158 TYR159

Nucleic acids
Unit 7 A-1 A0 A1 U2 A3 A4
Unit 8 A0 A1 A2 U3 A4 A5

Ligands
Unit 9 SO4201
Unit 10 SO4201 SO4202

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany