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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOUSE UNKEMPT ZINC FINGERS 1-3 (ZNF1-3) RNA
Keywords UNKEMPT, RNA-BINDING PROTEIN, CCCH ZINC FINGERS, RNA BINDING RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RING FINGER PROTEIN UNKEMPT HOMOLOG  A 142 2312 0
2  Protein   RING FINGER PROTEIN UNKEMPT HOMOLOG  B 140 2283 0
3  RNA    R 5 152 0
4  Ligand   RING FINGER PROTEIN UNKEMPT HOMOLOG  A 4 0 8
5  Ligand   RING FINGER PROTEIN UNKEMPT HOMOLOG  B 6 0 18
6 Water     307 0 307
total       604 4747 333

Proteins
Unit 1 PRO31 GLN32 HIS33 TYR34 THR35 TYR36 LEU37 LYS38 GLU39 PHE40 ARG41 THR42 GLU43 GLN44 CYS45 PRO46 LEU47 PHE48 VAL49 GLN50 HIS51 LYS52 CYS53 THR54 GLN55 HIS56 ARG57 PRO58 TYR59 THR60 CYS61 PHE62 HIS63 TRP64 HIS65 PHE66 VAL67 ASN68 GLN69 ARG70 ARG71 ARG72 ARG73 SER74 ILE75 ARG76 ARG77 ARG78 ASP79 GLY80 THR81 PHE82 ASN83 TYR84 SER85 PRO86 ASP87 VAL88 TYR89 CYS90 THR91 LYS92 TYR93 ASP94 GLU95 ALA96 THR97 GLY98 LEU99 CYS100 PRO101 GLU102 GLY103 ASP104 GLU105 CYS106 PRO107 PHE108 LEU109 HIS110 ARG111 THR112 THR113 GLY114 ASP115 THR116 GLU117 ARG118 ARG119 TYR120 HIS121 LEU122 ARG123 TYR124 TYR125 LYS126 THR127 GLY128 ILE129 CYS130 ILE131 HIS132 GLU133 THR134 ASP135 SER136 LYS137 GLY138 ASN139 CYS140 THR141 LYS142 ASN143 GLY144 LEU145 HIS146 CYS147 ALA148 PHE149 ALA150 HIS151 GLY152 PRO153 HIS154 ASP155 LEU156 ARG157 SER158 PRO159 VAL160 TYR161 ASP162 ILE163 ARG164 GLU165 LEU166 GLN167 ALA168 MET169 GLU170 ALA171 LEU172
Unit 2 PRO31 GLN32 HIS33 TYR34 THR35 TYR36 LEU37 LYS38 GLU39 PHE40 ARG41 THR42 GLU43 GLN44 CYS45 PRO46 LEU47 PHE48 VAL49 GLN50 HIS51 LYS52 CYS53 THR54 GLN55 HIS56 ARG57 PRO58 TYR59 THR60 CYS61 PHE62 HIS63 TRP64 HIS65 PHE66 VAL67 ASN68 GLN69 ARG70 ARG71 ARG72 ARG73 SER74 ILE75 ARG76 ARG77 ARG78 ASP79 GLY80 THR81 PHE82 ASN83 TYR84 SER85 PRO86 ASP87 VAL88 TYR89 CYS90 THR91 LYS92 TYR93 ASP94 GLU95 ALA96 THR97 GLY98 LEU99 CYS100 PRO101 GLU102 GLY103 ASP104 GLU105 CYS106 PRO107 PHE108 LEU109 HIS110 ARG111 THR112 THR113 GLY114 ASP115 THR116 GLU117 ARG118 ARG119 TYR120 HIS121 LEU122 ARG123 TYR124 TYR125 LYS126 THR127 GLY128 ILE129 CYS130 ILE131 HIS132 GLU133 THR134 ASP135 SER136 LYS137 GLY138 ASN139 CYS140 THR141 LYS142 ASN143 GLY144 LEU145 HIS146 CYS147 ALA148 PHE149 ALA150 HIS151 GLY152 PRO153 HIS154 ASP155 LEU156 ARG157 SER158 PRO159 VAL160 TYR161 ASP162 ILE163 ARG164 GLU165 LEU166 GLN167 ALA168 MET169 GLU170

Nucleic acids
Unit 3 U1 U2 A3 U4 U5

Ligands
Unit 4 ZN201 ZN202 ZN203 SO4204
Unit 5 ZN201 ZN202 ZN203 SO4204 SO4205 SO4206

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany