Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title HUMAN NAV1.7-VSD4-NAVAB IN COMPLEX WITH GX-936.
Keywords MEMBRANE PROTEIN, ION CHANNEL, VOLTAGE-GATED SODIUM CHANNEL, MOLECULE ANTAGONIST, METAL TRANSPORT
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5EK0     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  A 250 2061 0
2  Protein   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  B 245 2023 0
3  Protein   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  C 242 1999 0
4  Protein   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  D 242 1999 0
5  Ligand   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  A 8 0 130
6  Ligand   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  B 6 0 142
7  Ligand   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  C 5 0 104
8  Ligand   CHIMERA OF BACTERIAL ION TRANSPORT PROTEIN AND HU CHANNEL PROTEIN TYPE 9 SUBUNIT ALPHA  D 6 0 113
total       1004 8082 489
Proteins
Unit 1 PRO-4 ARG-3 GLY-2 SER-1 HIS0 MET1493 TYR1494 LEU1495 ARG1496 ILE1497 THR1498 ASN1499 ILE1500 VAL1501 GLU1502 SER1503 SER1504 PHE1505 PHE1506 THR1507 LYS1508 PHE1509 ILE1510 ILE1511 TYR1512 LEU1513 ILE1514 VAL1515 LEU1516 ASN1517 MET1518 VAL1519 THR1520 MET1521 MET1522 VAL1523 GLU1524 LYS1525 GLU1526 GLY1527 GLN1528 SER1529 GLN1530 HIS1531 MET1532 THR1533 GLU1534 VAL1535 LEU1536 TYR1537 TRP1538 ILE1539 ASN1540 VAL1541 VAL1542 PHE1543 ILE1544 ILE1545 LEU1546 PHE1547 THR1548 ILE1549 GLU1550 ILE1551 ILE1552 LEU1553 ARG1554 ILE1555 TYR1556 VAL1557 HIS1558 ARG1559 ILE1560 SER1561 PHE1562 PHE1563 LYS1564 ASP1565 PRO1566 TRP1567 SER1568 LEU1569 PHE1570 ASP1571 PHE1572 VAL1573 VAL1574 VAL1575 ILE1576 ILE1577 SER1578 ILE1579 VAL1580 GLY1581 MET1582 PHE1583 LEU1584 ALA1585 ASP1586 LEU1587 ILE1588 GLU1589 THR1590 TYR1591 PHE1592 VAL1593 SER1594 PRO1595 THR1596 LEU1597 PHE1598 ARG1599 VAL1600 ILE1601 ARG1602 LEU1603 ALA1604 ARG1605 ILE1606 GLY1607 ARG1608 ILE1609 LEU1610 ARG1611 LEU1612 VAL1613 THR1614 ALA1615 VAL1616 PRO1617 GLN1618 MET1619 ARG1620 LYS1621 ILE1622 VAL1623 SER1624 ALA1625 LEU1626 ILE1627 SER1628 VAL1629 ILE1630 PRO1631 GLY1632 MET1633 LEU1634 SER1635 VAL1636 ILE1637 ALA1638 LEU1639 MET1640 THR1641 LEU1642 PHE1643 PHE1644 TYR1645 ILE1646 PHE1647 ALA1648 ILE1649 MET1650 ALA1651 THR1652 GLN1653 LEU1654 PHE1655 GLY1656 GLU1657 ARG1658 PHE1659 PRO1660 GLU1661 TRP1662 PHE1663 GLY1664 THR1665 LEU1666 GLY1667 GLU1668 SER1669 PHE1670 TYR1671 THR1672 LEU1673 PHE1674 GLN1675 VAL1676 MET1677 THR1678 LEU1679 GLU1680 SER1681 TRP1682 SER1683 MET1684 GLY1685 ILE1686 VAL1687 ARG1688 PRO1689 LEU1690 MET1691 GLU1692 VAL1693 TYR1694 PRO1695 TYR1696 ALA1697 TRP1698 VAL1699 PHE1700 PHE1701 ILE1702 PRO1703 PHE1704 ILE1705 PHE1706 VAL1707 VAL1708 THR1709 PHE1710 VAL1711 MET1712 ILE1713 ASN1714 LEU1715 VAL1716 VAL1717 ALA1718 ILE1719 ILE1720 VAL1721 ASP1722 ALA1723 MET1724 ALA1725 ILE1726 LEU1727 ASN1728 GLN1729 LYS1730 GLU1731 GLU1732 GLN1733 HIS1734 ILE1735 ILE1736 ASP1737
Unit 2 MET1493 TYR1494 LEU1495 ARG1496 ILE1497 THR1498 ASN1499 ILE1500 VAL1501 GLU1502 SER1503 SER1504 PHE1505 PHE1506 THR1507 LYS1508 PHE1509 ILE1510 ILE1511 TYR1512 LEU1513 ILE1514 VAL1515 LEU1516 ASN1517 MET1518 VAL1519 THR1520 MET1521 MET1522 VAL1523 GLU1524 LYS1525 GLU1526 GLY1527 GLN1528 SER1529 GLN1530 HIS1531 MET1532 THR1533 GLU1534 VAL1535 LEU1536 TYR1537 TRP1538 ILE1539 ASN1540 VAL1541 VAL1542 PHE1543 ILE1544 ILE1545 LEU1546 PHE1547 THR1548 ILE1549 GLU1550 ILE1551 ILE1552 LEU1553 ARG1554 ILE1555 TYR1556 VAL1557 HIS1558 ARG1559 ILE1560 SER1561 PHE1562 PHE1563 LYS1564 ASP1565 PRO1566 TRP1567 SER1568 LEU1569 PHE1570 ASP1571 PHE1572 VAL1573 VAL1574 VAL1575 ILE1576 ILE1577 SER1578 ILE1579 VAL1580 GLY1581 MET1582 PHE1583 LEU1584 ALA1585 ASP1586 LEU1587 ILE1588 GLU1589 THR1590 TYR1591 PHE1592 VAL1593 SER1594 PRO1595 THR1596 LEU1597 PHE1598 ARG1599 VAL1600 ILE1601 ARG1602 LEU1603 ALA1604 ARG1605 ILE1606 GLY1607 ARG1608 ILE1609 LEU1610 ARG1611 LEU1612 VAL1613 THR1614 ALA1615 VAL1616 PRO1617 GLN1618 MET1619 ARG1620 LYS1621 ILE1622 VAL1623 SER1624 ALA1625 LEU1626 ILE1627 SER1628 VAL1629 ILE1630 PRO1631 GLY1632 MET1633 LEU1634 SER1635 VAL1636 ILE1637 ALA1638 LEU1639 MET1640 THR1641 LEU1642 PHE1643 PHE1644 TYR1645 ILE1646 PHE1647 ALA1648 ILE1649 MET1650 ALA1651 THR1652 GLN1653 LEU1654 PHE1655 GLY1656 GLU1657 ARG1658 PHE1659 PRO1660 GLU1661 TRP1662 PHE1663 GLY1664 THR1665 LEU1666 GLY1667 GLU1668 SER1669 PHE1670 TYR1671 THR1672 LEU1673 PHE1674 GLN1675 VAL1676 MET1677 THR1678 LEU1679 GLU1680 SER1681 TRP1682 SER1683 MET1684 GLY1685 ILE1686 VAL1687 ARG1688 PRO1689 LEU1690 MET1691 GLU1692 VAL1693 TYR1694 PRO1695 TYR1696 ALA1697 TRP1698 VAL1699 PHE1700 PHE1701 ILE1702 PRO1703 PHE1704 ILE1705 PHE1706 VAL1707 VAL1708 THR1709 PHE1710 VAL1711 MET1712 ILE1713 ASN1714 LEU1715 VAL1716 VAL1717 ALA1718 ILE1719 ILE1720 VAL1721 ASP1722 ALA1723 MET1724 ALA1725 ILE1726 LEU1727 ASN1728 GLN1729 LYS1730 GLU1731 GLU1732 GLN1733 HIS1734 ILE1735 ILE1736 ASP1737
Unit 3 MET1493 TYR1494 LEU1495 ARG1496 ILE1497 THR1498 ASN1499 ILE1500 VAL1501 GLU1502 SER1503 SER1504 PHE1505 PHE1506 THR1507 LYS1508 PHE1509 ILE1510 ILE1511 TYR1512 LEU1513 ILE1514 VAL1515 LEU1516 ASN1517 MET1518 VAL1519 THR1520 MET1521 MET1522 VAL1523 GLU1524 LYS1525 GLU1526 GLY1527 GLN1528 SER1529 GLN1530 HIS1531 MET1532 THR1533 GLU1534 VAL1535 LEU1536 TYR1537 TRP1538 ILE1539 ASN1540 VAL1541 VAL1542 PHE1543 ILE1544 ILE1545 LEU1546 PHE1547 THR1548 ILE1549 GLU1550 ILE1551 ILE1552 LEU1553 ARG1554 ILE1555 TYR1556 VAL1557 HIS1558 ARG1559 ILE1560 SER1561 PHE1562 PHE1563 LYS1564 ASP1565 PRO1566 TRP1567 SER1568 LEU1569 PHE1570 ASP1571 PHE1572 VAL1573 VAL1574 VAL1575 ILE1576 ILE1577 SER1578 ILE1579 VAL1580 GLY1581 MET1582 PHE1583 LEU1584 ALA1585 ASP1586 LEU1587 ILE1588 GLU1589 THR1590 TYR1591 PRO1595 THR1596 LEU1597 PHE1598 ARG1599 VAL1600 ILE1601 ARG1602 LEU1603 ALA1604 ARG1605 ILE1606 GLY1607 ARG1608 ILE1609 LEU1610 ARG1611 LEU1612 VAL1613 THR1614 ALA1615 VAL1616 PRO1617 GLN1618 MET1619 ARG1620 LYS1621 ILE1622 VAL1623 SER1624 ALA1625 LEU1626 ILE1627 SER1628 VAL1629 ILE1630 PRO1631 GLY1632 MET1633 LEU1634 SER1635 VAL1636 ILE1637 ALA1638 LEU1639 MET1640 THR1641 LEU1642 PHE1643 PHE1644 TYR1645 ILE1646 PHE1647 ALA1648 ILE1649 MET1650 ALA1651 THR1652 GLN1653 LEU1654 PHE1655 GLY1656 GLU1657 ARG1658 PHE1659 PRO1660 GLU1661 TRP1662 PHE1663 GLY1664 THR1665 LEU1666 GLY1667 GLU1668 SER1669 PHE1670 TYR1671 THR1672 LEU1673 PHE1674 GLN1675 VAL1676 MET1677 THR1678 LEU1679 GLU1680 SER1681 TRP1682 SER1683 MET1684 GLY1685 ILE1686 VAL1687 ARG1688 PRO1689 LEU1690 MET1691 GLU1692 VAL1693 TYR1694 PRO1695 TYR1696 ALA1697 TRP1698 VAL1699 PHE1700 PHE1701 ILE1702 PRO1703 PHE1704 ILE1705 PHE1706 VAL1707 VAL1708 THR1709 PHE1710 VAL1711 MET1712 ILE1713 ASN1714 LEU1715 VAL1716 VAL1717 ALA1718 ILE1719 ILE1720 VAL1721 ASP1722 ALA1723 MET1724 ALA1725 ILE1726 LEU1727 ASN1728 GLN1729 LYS1730 GLU1731 GLU1732 GLN1733 HIS1734 ILE1735 ILE1736 ASP1737
Unit 4 MET1493 TYR1494 LEU1495 ARG1496 ILE1497 THR1498 ASN1499 ILE1500 VAL1501 GLU1502 SER1503 SER1504 PHE1505 PHE1506 THR1507 LYS1508 PHE1509 ILE1510 ILE1511 TYR1512 LEU1513 ILE1514 VAL1515 LEU1516 ASN1517 MET1518 VAL1519 THR1520 MET1521 MET1522 VAL1523 GLU1524 LYS1525 GLU1526 GLY1527 GLN1528 SER1529 GLN1530 HIS1531 MET1532 THR1533 GLU1534 VAL1535 LEU1536 TYR1537 TRP1538 ILE1539 ASN1540 VAL1541 VAL1542 PHE1543 ILE1544 ILE1545 LEU1546 PHE1547 THR1548 ILE1549 GLU1550 ILE1551 ILE1552 LEU1553 ARG1554 ILE1555 TYR1556 VAL1557 HIS1558 ARG1559 ILE1560 SER1561 PHE1562 PHE1563 LYS1564 ASP1565 PRO1566 TRP1567 SER1568 LEU1569 PHE1570 ASP1571 PHE1572 VAL1573 VAL1574 VAL1575 ILE1576 ILE1577 SER1578 ILE1579 VAL1580 GLY1581 MET1582 PHE1583 LEU1584 ALA1585 ASP1586 LEU1587 ILE1588 GLU1589 THR1590 TYR1591 PRO1595 THR1596 LEU1597 PHE1598 ARG1599 VAL1600 ILE1601 ARG1602 LEU1603 ALA1604 ARG1605 ILE1606 GLY1607 ARG1608 ILE1609 LEU1610 ARG1611 LEU1612 VAL1613 THR1614 ALA1615 VAL1616 PRO1617 GLN1618 MET1619 ARG1620 LYS1621 ILE1622 VAL1623 SER1624 ALA1625 LEU1626 ILE1627 SER1628 VAL1629 ILE1630 PRO1631 GLY1632 MET1633 LEU1634 SER1635 VAL1636 ILE1637 ALA1638 LEU1639 MET1640 THR1641 LEU1642 PHE1643 PHE1644 TYR1645 ILE1646 PHE1647 ALA1648 ILE1649 MET1650 ALA1651 THR1652 GLN1653 LEU1654 PHE1655 GLY1656 GLU1657 ARG1658 PHE1659 PRO1660 GLU1661 TRP1662 PHE1663 GLY1664 THR1665 LEU1666 GLY1667 GLU1668 SER1669 PHE1670 TYR1671 THR1672 LEU1673 PHE1674 GLN1675 VAL1676 MET1677 THR1678 LEU1679 GLU1680 SER1681 TRP1682 SER1683 MET1684 GLY1685 ILE1686 VAL1687 ARG1688 PRO1689 LEU1690 MET1691 GLU1692 VAL1693 TYR1694 PRO1695 TYR1696 ALA1697 TRP1698 VAL1699 PHE1700 PHE1701 ILE1702 PRO1703 PHE1704 ILE1705 PHE1706 VAL1707 VAL1708 THR1709 PHE1710 VAL1711 MET1712 ILE1713 ASN1714 LEU1715 VAL1716 VAL1717 ALA1718 ILE1719 ILE1720 VAL1721 ASP1722 ALA1723 MET1724 ALA1725 ILE1726 LEU1727 ASN1728 GLN1729 LYS1730 GLU1731 GLU1732 GLN1733 HIS1734 ILE1735 ILE1736 ASP1737
Ligands
Unit 5 PX41801 PX41802 PX41803 PX41804 PX41805 PX41806 PX41807 5P21808
Unit 6 PX41801 PX41802 PX41803 PX41804 PX41805 5P21806
Unit 7 PX41801 PX41802 PX41803 PX41804 5P21805
Unit 8 PX41801 PX41802 PX41803 PX41804 PX41805 5P21806
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany