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Sequence, Chains, Asymmetric and Biological Units

Title DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYL METHIONIN MOLECULE BF341
Keywords TRANSFERASE, DENGUE VIRUS, NS5 METHYLTRANSFERASE, FRAGMENT-B DISCOVERY
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5EHG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA-DIRECTED RNA POLYMERASE NS5  A 256 2032 0
2  Protein   RNA-DIRECTED RNA POLYMERASE NS5  C 256 2011 0
3  Ligand   RNA-DIRECTED RNA POLYMERASE NS5  A 2 0 58
4  Ligand   RNA-DIRECTED RNA POLYMERASE NS5  C 1 0 27
5 Water     424 0 424
total       939 4043 509

Proteins
Unit 1 GLU7 THR8 LEU9 GLY10 GLU11 LYS12 TRP13 LYS14 LYS15 LYS16 LEU17 ASN18 GLN19 LEU20 SER21 ARG22 LYS23 GLU24 PHE25 ASP26 LEU27 TYR28 LYS29 LYS30 SER31 GLY32 ILE33 THR34 GLU35 VAL36 ASP37 ARG38 THR39 GLU40 ALA41 LYS42 GLU43 GLY44 LEU45 LYS46 ARG47 GLY48 GLU49 THR50 THR51 HIS52 HIS53 ALA54 VAL55 SER56 ARG57 GLY58 SER59 ALA60 LYS61 LEU62 GLN63 TRP64 PHE65 VAL66 GLU67 ARG68 ASN69 MET70 VAL71 ILE72 PRO73 GLU74 GLY75 ARG76 VAL77 ILE78 ASP79 LEU80 GLY81 CYS82 GLY83 ARG84 GLY85 GLY86 TRP87 SER88 TYR89 TYR90 CYS91 ALA92 GLY93 LEU94 LYS95 LYS96 VAL97 THR98 GLU99 VAL100 ARG101 GLY102 TYR103 THR104 LYS105 GLY106 GLY107 PRO108 GLY109 HIS110 GLU111 GLU112 PRO113 VAL114 PRO115 MET116 SER117 THR118 TYR119 GLY120 TRP121 ASN122 ILE123 VAL124 LYS125 LEU126 MET127 SER128 GLY129 LYS130 ASP131 VAL132 PHE133 TYR134 LEU135 PRO136 PRO137 GLU138 LYS139 CYS140 ASP141 THR142 LEU143 LEU144 CYS145 ASP146 ILE147 GLY148 GLU149 SER150 SER151 PRO152 SER153 PRO154 THR155 VAL156 GLU157 GLU158 SER159 ARG160 THR161 ILE162 ARG163 VAL164 LEU165 LYS166 MET167 VAL168 GLU169 PRO170 TRP171 LEU172 LYS173 ASN174 ASN175 GLN176 PHE177 CYS178 ILE179 LYS180 VAL181 LEU182 ASN183 PRO184 TYR185 MET186 PRO187 THR188 VAL189 ILE190 GLU191 HIS192 LEU193 GLU194 ARG195 LEU196 GLN197 ARG198 LYS199 HIS200 GLY201 GLY202 MET203 LEU204 VAL205 ARG206 ASN207 PRO208 LEU209 SER210 ARG211 ASN212 SER213 THR214 HIS215 GLU216 MET217 TYR218 TRP219 ILE220 SER221 ASN222 GLY223 THR224 GLY225 ASN226 ILE227 VAL228 SER229 SER230 VAL231 ASN232 MET233 VAL234 SER235 ARG236 LEU237 LEU238 LEU239 ASN240 ARG241 PHE242 THR243 MET244 THR245 HIS246 ARG247 ARG248 PRO249 THR250 ILE251 GLU252 LYS253 ASP254 VAL255 ASP256 LEU257 GLY258 ALA259 GLY260 THR261 ARG262
Unit 2 GLU7 THR8 LEU9 GLY10 GLU11 LYS12 TRP13 LYS14 LYS15 LYS16 LEU17 ASN18 GLN19 LEU20 SER21 ARG22 LYS23 GLU24 PHE25 ASP26 LEU27 TYR28 LYS29 LYS30 SER31 GLY32 ILE33 THR34 GLU35 VAL36 ASP37 ARG38 THR39 GLU40 ALA41 LYS42 GLU43 GLY44 LEU45 LYS46 ARG47 GLY48 GLU49 THR50 THR51 HIS52 HIS53 ALA54 VAL55 SER56 ARG57 GLY58 SER59 ALA60 LYS61 LEU62 GLN63 TRP64 PHE65 VAL66 GLU67 ARG68 ASN69 MET70 VAL71 ILE72 PRO73 GLU74 GLY75 ARG76 VAL77 ILE78 ASP79 LEU80 GLY81 CYS82 GLY83 ARG84 GLY85 GLY86 TRP87 SER88 TYR89 TYR90 CYS91 ALA92 GLY93 LEU94 LYS95 LYS96 VAL97 THR98 GLU99 VAL100 ARG101 GLY102 TYR103 THR104 LYS105 GLY106 GLY107 PRO108 GLY109 HIS110 GLU111 GLU112 PRO113 VAL114 PRO115 MET116 SER117 THR118 TYR119 GLY120 TRP121 ASN122 ILE123 VAL124 LYS125 LEU126 MET127 SER128 GLY129 LYS130 ASP131 VAL132 PHE133 TYR134 LEU135 PRO136 PRO137 GLU138 LYS139 CYS140 ASP141 THR142 LEU143 LEU144 CYS145 ASP146 ILE147 GLY148 GLU149 SER150 SER151 PRO152 SER153 PRO154 THR155 VAL156 GLU157 GLU158 SER159 ARG160 THR161 ILE162 ARG163 VAL164 LEU165 LYS166 MET167 VAL168 GLU169 PRO170 TRP171 LEU172 LYS173 ASN174 ASN175 GLN176 PHE177 CYS178 ILE179 LYS180 VAL181 LEU182 ASN183 PRO184 TYR185 MET186 PRO187 THR188 VAL189 ILE190 GLU191 HIS192 LEU193 GLU194 ARG195 LEU196 GLN197 ARG198 LYS199 HIS200 GLY201 GLY202 MET203 LEU204 VAL205 ARG206 ASN207 PRO208 LEU209 SER210 ARG211 ASN212 SER213 THR214 HIS215 GLU216 MET217 TYR218 TRP219 ILE220 SER221 ASN222 GLY223 THR224 GLY225 ASN226 ILE227 VAL228 SER229 SER230 VAL231 ASN232 MET233 VAL234 SER235 ARG236 LEU237 LEU238 LEU239 ASN240 ARG241 PHE242 THR243 MET244 THR245 HIS246 ARG247 ARG248 PRO249 THR250 ILE251 GLU252 LYS253 ASP254 VAL255 ASP256 LEU257 GLY258 ALA259 GLY260 THR261 ARG262

Ligands
Unit 3 SAM301 5O0302
Unit 4 SAM4001

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany