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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF HOXB13 COMPLEX WITH METHYLATED DNA
Keywords TRANSCRIPTION FACTOR, METHYLATED DNA, COMPLEX, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5EF6     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HOMEOBOX PROTEIN HOX-B13  A 61 521 0
2  Other macromolecule   DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM) P*GP*AP*GP*GP*TP*CP*C)-3')  C 18 350 20
3  Other macromolecule   DNA (5'-D(P*GP*GP*AP*CP*CP*TP*(5CM) P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3')  F 18 350 20
4  Protein   HOMEOBOX PROTEIN HOX-B13  B 61 521 0
5  Other macromolecule   DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM) P*GP*AP*GP*GP*TP*CP*C)-3')  D 18 350 20
6  Other macromolecule   DNA (5'-D(P*GP*GP*AP*CP*CP*TP*(5CM) P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3')  E 18 350 20
7  Protein   HOMEOBOX PROTEIN HOX-B13  G 62 528 0
8  Other macromolecule   DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM) P*GP*AP*GP*GP*TP*CP*C)-3')  H 18 350 20
9  Other macromolecule   DNA (5'-D(P*GP*GP*AP*CP*CP*TP*(5CM) P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3')  I 18 350 20
10  Protein   HOMEOBOX PROTEIN HOX-B13  J 62 528 0
11  Other macromolecule   DNA (5'-D(P*TP*TP*GP*TP*GP*TP*TP*TP*TP*AP*(5CM) P*GP*AP*GP*GP*TP*CP*C)-3')  K 18 350 20
12  Other macromolecule   DNA (5'-D(P*GP*GP*AP*CP*CP*TP*(5CM) P*GP*TP*AP*AP*AP*AP*CP*AP*CP*AP*A)-3')  L 18 350 20
13 Water     101 0 101
total       491 4898 261
Proteins
Unit 1 ARG217 LYS218 LYS219 ARG220 ILE221 PRO222 TYR223 SER224 LYS225 GLY226 GLN227 LEU228 ARG229 GLU230 LEU231 GLU232 ARG233 GLU234 TYR235 ALA236 ALA237 ASN238 LYS239 PHE240 ILE241 THR242 LYS243 ASP244 LYS245 ARG246 ARG247 LYS248 ILE249 SER250 ALA251 ALA252 THR253 SER254 LEU255 SER256 GLU257 ARG258 GLN259 ILE260 THR261 ILE262 TRP263 PHE264 GLN265 ASN266 ARG267 ARG268 VAL269 LYS270 GLU271 LYS272 LYS273 VAL274 LEU275 ALA276 LYS277
Unit 4 ARG217 LYS218 LYS219 ARG220 ILE221 PRO222 TYR223 SER224 LYS225 GLY226 GLN227 LEU228 ARG229 GLU230 LEU231 GLU232 ARG233 GLU234 TYR235 ALA236 ALA237 ASN238 LYS239 PHE240 ILE241 THR242 LYS243 ASP244 LYS245 ARG246 ARG247 LYS248 ILE249 SER250 ALA251 ALA252 THR253 SER254 LEU255 SER256 GLU257 ARG258 GLN259 ILE260 THR261 ILE262 TRP263 PHE264 GLN265 ASN266 ARG267 ARG268 VAL269 LYS270 GLU271 LYS272 LYS273 VAL274 LEU275 ALA276 LYS277
Unit 7 ARG217 LYS218 LYS219 ARG220 ILE221 PRO222 TYR223 SER224 LYS225 GLY226 GLN227 LEU228 ARG229 GLU230 LEU231 GLU232 ARG233 GLU234 TYR235 ALA236 ALA237 ASN238 LYS239 PHE240 ILE241 THR242 LYS243 ASP244 LYS245 ARG246 ARG247 LYS248 ILE249 SER250 ALA251 ALA252 THR253 SER254 LEU255 SER256 GLU257 ARG258 GLN259 ILE260 THR261 ILE262 TRP263 PHE264 GLN265 ASN266 ARG267 ARG268 VAL269 LYS270 GLU271 LYS272 LYS273 VAL274 LEU275 ALA276 LYS277 VAL278
Unit 10 ARG217 LYS218 LYS219 ARG220 ILE221 PRO222 TYR223 SER224 LYS225 GLY226 GLN227 LEU228 ARG229 GLU230 LEU231 GLU232 ARG233 GLU234 TYR235 ALA236 ALA237 ASN238 LYS239 PHE240 ILE241 THR242 LYS243 ASP244 LYS245 ARG246 ARG247 LYS248 ILE249 SER250 ALA251 ALA252 THR253 SER254 LEU255 SER256 GLU257 ARG258 GLN259 ILE260 THR261 ILE262 TRP263 PHE264 GLN265 ASN266 ARG267 ARG268 VAL269 LYS270 GLU271 LYS272 LYS273 VAL274 LEU275 ALA276 LYS277 VAL278
Other macromolecules
Unit 2 DT1 DT2 DG3 DT4 DG5 DT6 DT7 DT8 DT9 DA10 5CM11 DG12 DA13 DG14 DG15 DT16 DC17 DC18
Unit 3 DG1 DG2 DA3 DC4 DC5 DT6 5CM7 DG8 DT9 DA10 DA11 DA12 DA13 DC14 DA15 DC16 DA17 DA18
Unit 5 DT1 DT2 DG3 DT4 DG5 DT6 DT7 DT8 DT9 DA10 5CM11 DG12 DA13 DG14 DG15 DT16 DC17 DC18
Unit 6 DG1 DG2 DA3 DC4 DC5 DT6 5CM7 DG8 DT9 DA10 DA11 DA12 DA13 DC14 DA15 DC16 DA17 DA18
Unit 8 DT1 DT2 DG3 DT4 DG5 DT6 DT7 DT8 DT9 DA10 5CM11 DG12 DA13 DG14 DG15 DT16 DC17 DC18
Unit 9 DG1 DG2 DA3 DC4 DC5 DT6 5CM7 DG8 DT9 DA10 DA11 DA12 DA13 DC14 DA15 DC16 DA17 DA18
Unit 11 DT1 DT2 DG3 DT4 DG5 DT6 DT7 DT8 DT9 DA10 5CM11 DG12 DA13 DG14 DG15 DT16 DC17 DC18
Unit 12 DG1 DG2 DA3 DC4 DC5 DT6 5CM7 DG8 DT9 DA10 DA11 DA12 DA13 DC14 DA15 DC16 DA17 DA18
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany